RNA–Protein interactions for RNA: ENST00000599569.2

SSR4P1-203, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 2,260 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-203ENST00000599569 CARMIL1Q5VZK9 1371 aa23.92■■□□□ 1.42
SSR4P1-203ENST00000599569 PBRM1Q86U86 1689 aa23.9■■□□□ 1.42
SSR4P1-203ENST00000599569 ARHGAP35Q9NRY4 1499 aa23.89■■□□□ 1.42
SSR4P1-203ENST00000599569 HNRNPUL2Q1KMD3 747 aaKnown RBP23.89■■□□□ 1.41
SSR4P1-203ENST00000599569 GRIN2BQ13224 1484 aa23.86■■□□□ 1.41
SSR4P1-203ENST00000599569 CUL7Q14999 1698 aa23.84■■□□□ 1.41
SSR4P1-203ENST00000599569 KANK4Q5T7N3 995 aaPredicted RBP23.81■■□□□ 1.4
SSR4P1-203ENST00000599569 SNAPC4Q5SXM2 1469 aa23.77■■□□□ 1.4
SSR4P1-203ENST00000599569 ADAMTS12P58397 1594 aa23.75■■□□□ 1.39
SSR4P1-203ENST00000599569 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
SSR4P1-203ENST00000599569 MAGI1Q96QZ7 1491 aaPredicted RBP23.68■■□□□ 1.38
SSR4P1-203ENST00000599569 RRBP1Q9P2E9 1410 aaKnown RBP23.67■■□□□ 1.38
SSR4P1-203ENST00000599569 MAP3K1Q13233 1512 aa23.63■■□□□ 1.37
SSR4P1-203ENST00000599569 FBLN2P98095 1184 aa23.63■■□□□ 1.37
SSR4P1-203ENST00000599569 SYNJ2O15056 1496 aa23.61■■□□□ 1.37
SSR4P1-203ENST00000599569 CHMP7Q8WUX9 453 aaPredicted RBP23.61■■□□□ 1.37
SSR4P1-203ENST00000599569 TIAM1Q13009 1591 aa23.59■■□□□ 1.37
SSR4P1-203ENST00000599569 GRIN2AQ12879 1464 aa23.58■■□□□ 1.37
SSR4P1-203ENST00000599569 CCNB3Q8WWL7 1395 aa23.56■■□□□ 1.36
SSR4P1-203ENST00000599569 CTTNBP2Q8WZ74 1663 aa23.55■■□□□ 1.36
SSR4P1-203ENST00000599569 DIEXFQ68CQ4 756 aaKnown RBP23.54■■□□□ 1.36
SSR4P1-203ENST00000599569 EFCAB5A4FU69 1503 aa23.52■■□□□ 1.36
SSR4P1-203ENST00000599569 P3H3Q8IVL6 736 aa23.52■■□□□ 1.36
SSR4P1-203ENST00000599569 LRRC9Q6ZRR7 1453 aa23.51■■□□□ 1.35
SSR4P1-203ENST00000599569 ZNF316A6NFI3 1004 aaPredicted RBP23.5■■□□□ 1.35
SSR4P1-203ENST00000599569 CLSPNQ9HAW4 1339 aa23.5■■□□□ 1.35
SSR4P1-203ENST00000599569 DHX57Q6P158 1386 aaKnown RBP23.47■■□□□ 1.35
SSR4P1-203ENST00000599569 FHOD3Q2V2M9 1422 aa23.47■■□□□ 1.35
SSR4P1-203ENST00000599569 PCF11O94913 1555 aaKnown RBP23.47■■□□□ 1.35
SSR4P1-203ENST00000599569 CHD1O14646 1710 aa23.47■■□□□ 1.35
SSR4P1-203ENST00000599569 CEP170Q5SW79 1584 aa23.46■■□□□ 1.35
SSR4P1-203ENST00000599569 CFAP43Q8NDM7 1665 aa23.44■■□□□ 1.34
SSR4P1-203ENST00000599569 FYCO1Q9BQS8 1478 aa23.42■■□□□ 1.34
SSR4P1-203ENST00000599569 NUP160Q12769 1436 aa23.41■■□□□ 1.34
SSR4P1-203ENST00000599569 CASKIN1Q8WXD9 1431 aa23.41■■□□□ 1.34
SSR4P1-203ENST00000599569 IQGAP2Q13576 1575 aa23.41■■□□□ 1.34
SSR4P1-203ENST00000599569 KIAA0586Q9BVV6 1533 aa23.4■■□□□ 1.34
SSR4P1-203ENST00000599569 ATP1B4Q9UN42 357 aaPredicted RBP23.38■■□□□ 1.33
SSR4P1-203ENST00000599569 PHLDB1Q86UU1 1377 aa23.38■■□□□ 1.33
SSR4P1-203ENST00000599569 FMN1Q68DA7 1419 aa23.37■■□□□ 1.33
SSR4P1-203ENST00000599569 ITGAEP38570 1179 aa23.36■■□□□ 1.33
SSR4P1-203ENST00000599569 SAMD9Q5K651 1589 aa23.32■■□□□ 1.32
SSR4P1-203ENST00000599569 UGGT2Q9NYU1 1516 aa23.28■■□□□ 1.32
SSR4P1-203ENST00000599569 JPH4Q96JJ6 628 aa23.26■■□□□ 1.31
SSR4P1-203ENST00000599569 RAB3GAP2Q9H2M9 1393 aa23.26■■□□□ 1.31
SSR4P1-203ENST00000599569 FAM50AQ14320 339 aaKnown RBP23.24■■□□□ 1.31
SSR4P1-203ENST00000599569 SETD5Q9C0A6 1442 aa23.23■■□□□ 1.31
SSR4P1-203ENST00000599569 DISP1Q96F81 1524 aa23.22■■□□□ 1.31
SSR4P1-203ENST00000599569 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.21■■□□□ 1.31
SSR4P1-203ENST00000599569 KIAA0556O60303 1618 aa23.18■■□□□ 1.3
SSR4P1-203ENST00000599569 CLASP1Q7Z460 1538 aa23.17■■□□□ 1.3
SSR4P1-203ENST00000599569 MTUS2Q5JR59 1369 aa23.16■■□□□ 1.3
SSR4P1-203ENST00000599569 PRG4Q92954 1404 aaPredicted RBP23.14■■□□□ 1.29
SSR4P1-203ENST00000599569 LRRIQ1Q96JM4 1722 aa23.13■■□□□ 1.29
SSR4P1-203ENST00000599569 SHROOM2Q13796 1616 aa23.12■■□□□ 1.29
SSR4P1-203ENST00000599569 SCAF1Q9H7N4 1312 aaKnown RBP23.12■■□□□ 1.29
SSR4P1-203ENST00000599569 OSCARQ8IYS5 282 aa23.12■■□□□ 1.29
SSR4P1-203ENST00000599569 FGD6Q6ZV73 1430 aa23.12■■□□□ 1.29
SSR4P1-203ENST00000599569 CARMIL2Q6F5E8 1435 aa23.11■■□□□ 1.29
SSR4P1-203ENST00000599569 MAPKBP1O60336 1514 aa23.11■■□□□ 1.29
SSR4P1-203ENST00000599569 ACIN1Q9UKV3 1341 aaKnown RBP23.11■■□□□ 1.29
SSR4P1-203ENST00000599569 CENPBP07199 599 aaPredicted RBP23.07■■□□□ 1.28
SSR4P1-203ENST00000599569 ERCC6L2Q5T890 1561 aa23.07■■□□□ 1.28
SSR4P1-203ENST00000599569 NEUROD1Q13562 356 aa23.06■■□□□ 1.28
SSR4P1-203ENST00000599569 MIER1Q8N108 512 aa23.05■■□□□ 1.28
SSR4P1-203ENST00000599569 NCOA2Q15596 1464 aa23.05■■□□□ 1.28
SSR4P1-203ENST00000599569 EHBP1L1Q8N3D4 1523 aa23.04■■□□□ 1.28
SSR4P1-203ENST00000599569 CCDC18Q5T9S5 1454 aa23.04■■□□□ 1.28
SSR4P1-203ENST00000599569 SUPT6HQ7KZ85 1726 aaKnown RBP23.03■■□□□ 1.28
SSR4P1-203ENST00000599569 MYOM3Q5VTT5 1437 aa23.02■■□□□ 1.28
SSR4P1-203ENST00000599569 HECW1Q76N89 1606 aa22.99■■□□□ 1.27
SSR4P1-203ENST00000599569 ARHGEF11O15085 1522 aa22.97■■□□□ 1.27
SSR4P1-203ENST00000599569 MAGI3Q5TCQ9 1506 aa22.96■■□□□ 1.27
SSR4P1-203ENST00000599569 PLB1Q6P1J6 1458 aa22.96■■□□□ 1.27
SSR4P1-203ENST00000599569 PTPRGP23470 1445 aa22.95■■□□□ 1.26
SSR4P1-203ENST00000599569 ARID3CA6NKF2 412 aa22.95■■□□□ 1.26
SSR4P1-203ENST00000599569 PTPRKQ15262 1439 aa22.95■■□□□ 1.26
SSR4P1-203ENST00000599569 EPRSP07814 1512 aaKnown RBP22.95■■□□□ 1.26
SSR4P1-203ENST00000599569 HFM1A2PYH4 1435 aa22.93■■□□□ 1.26
SSR4P1-203ENST00000599569 RAPGEF6Q8TEU7 1601 aa22.92■■□□□ 1.26
SSR4P1-203ENST00000599569 SIN3AQ96ST3 1273 aa22.91■■□□□ 1.26
SSR4P1-203ENST00000599569 TIMELESSQ9UNS1 1208 aa22.91■■□□□ 1.26
SSR4P1-203ENST00000599569 PTPN23Q9H3S7 1636 aa22.9■■□□□ 1.26
SSR4P1-203ENST00000599569 NUP153P49790 1475 aaKnown RBP22.88■■□□□ 1.25
SSR4P1-203ENST00000599569 ABCA8O94911 1581 aa22.87■■□□□ 1.25
SSR4P1-203ENST00000599569 CDK13Q14004 1512 aaKnown RBP22.86■■□□□ 1.25
SSR4P1-203ENST00000599569 TCOF1Q13428 1488 aaKnown RBP22.85■■□□□ 1.25
SSR4P1-203ENST00000599569 NAIPQ13075 1403 aa22.85■■□□□ 1.25
SSR4P1-203ENST00000599569 YTHDC1Q96MU7 727 aaKnown RBP22.84■■□□□ 1.25
SSR4P1-203ENST00000599569 UACAQ9BZF9 1416 aa22.83■■□□□ 1.25
SSR4P1-203ENST00000599569 MIA2Q96PC5 1412 aa22.81■■□□□ 1.24
SSR4P1-203ENST00000599569 GTF3C3Q9Y5Q9 886 aa22.78■■□□□ 1.24
SSR4P1-203ENST00000599569 PPP1R15AO75807 674 aaPredicted RBP22.75■■□□□ 1.23
SSR4P1-203ENST00000599569 ATP10BO94823 1461 aa22.74■■□□□ 1.23
SSR4P1-203ENST00000599569 ABCC2Q92887 1545 aa22.73■■□□□ 1.23
SSR4P1-203ENST00000599569 AKNAQ7Z591 1439 aa22.72■■□□□ 1.23
SSR4P1-203ENST00000599569 RRP7BPQ9NSQ0 103 aa22.71■■□□□ 1.23
SSR4P1-203ENST00000599569 CHIC2Q9UKJ5 165 aa22.71■■□□□ 1.23
SSR4P1-203ENST00000599569 CDK11AQ9UQ88 783 aaPredicted RBP22.7■■□□□ 1.22
SSR4P1-203ENST00000599569 GCC2Q8IWJ2 1684 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms