RNA–Protein interactions for RNA: ENST00000598923.1

SNRPA-205, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-205ENST00000598923 CUL7Q14999 1698 aa32■■■□□ 2.71
SNRPA-205ENST00000598923 JPH4Q96JJ6 628 aa32■■■□□ 2.71
SNRPA-205ENST00000598923 KIAA0586Q9BVV6 1533 aa31.87■■■□□ 2.69
SNRPA-205ENST00000598923 CARMIL1Q5VZK9 1371 aa31.78■■■□□ 2.68
SNRPA-205ENST00000598923 KIF13AQ9H1H9 1805 aa31.75■■■□□ 2.67
SNRPA-205ENST00000598923 ADCY10Q96PN6 1610 aa31.69■■■□□ 2.66
SNRPA-205ENST00000598923 MAPKBP1O60336 1514 aa31.62■■■□□ 2.65
SNRPA-205ENST00000598923 IQGAP2Q13576 1575 aa31.6■■■□□ 2.65
SNRPA-205ENST00000598923 NPM1P06748 294 aaKnown RBP eCLIP31.56■■■□□ 2.64
SNRPA-205ENST00000598923 ABCC10Q5T3U5 1492 aa31.55■■■□□ 2.64
SNRPA-205ENST00000598923 RAPGEF2Q9Y4G8 1499 aa31.52■■■□□ 2.64
SNRPA-205ENST00000598923 PTPRGP23470 1445 aa31.51■■■□□ 2.64
SNRPA-205ENST00000598923 CARMIL2Q6F5E8 1435 aa31.51■■■□□ 2.64
SNRPA-205ENST00000598923 DIP2BQ9P265 1576 aa31.51■■■□□ 2.63
SNRPA-205ENST00000598923 TNIKQ9UKE5 1360 aa31.48■■■□□ 2.63
SNRPA-205ENST00000598923 FAM69CQ0P6D2 419 aa31.45■■■□□ 2.63
SNRPA-205ENST00000598923 DISP1Q96F81 1524 aa31.44■■■□□ 2.62
SNRPA-205ENST00000598923 UGGT2Q9NYU1 1516 aa31.41■■■□□ 2.62
SNRPA-205ENST00000598923 ABCC2Q92887 1545 aa31.37■■■□□ 2.61
SNRPA-205ENST00000598923 TTBK1Q5TCY1 1321 aaPredicted RBP31.35■■■□□ 2.61
SNRPA-205ENST00000598923 CTTNBP2Q8WZ74 1663 aa31.35■■■□□ 2.61
SNRPA-205ENST00000598923 UHRF1BP1LA0JNW5 1464 aa31.34■■■□□ 2.61
SNRPA-205ENST00000598923 KIAA0556O60303 1618 aa31.32■■■□□ 2.6
SNRPA-205ENST00000598923 UACAQ9BZF9 1416 aa31.3■■■□□ 2.6
SNRPA-205ENST00000598923 TSPOAP1O95153 1857 aa31.29■■■□□ 2.6
SNRPA-205ENST00000598923 PRXQ9BXM0 1461 aa31.26■■■□□ 2.59
SNRPA-205ENST00000598923 ASXL2Q76L83 1435 aa31.23■■■□□ 2.59
SNRPA-205ENST00000598923 PLB1Q6P1J6 1458 aa31.21■■■□□ 2.59
SNRPA-205ENST00000598923 KDM5BQ9UGL1 1544 aa31.2■■■□□ 2.59
SNRPA-205ENST00000598923 AEBP2Q6ZN18 517 aaPredicted RBP31.2■■■□□ 2.59
SNRPA-205ENST00000598923 GLI2P10070 1586 aa31.19■■■□□ 2.58
SNRPA-205ENST00000598923 KDM6BO15054 1643 aa31.17■■■□□ 2.58
SNRPA-205ENST00000598923 ZCCHC11Q5TAX3 1644 aaKnown RBP31.16■■■□□ 2.58
SNRPA-205ENST00000598923 CHIC1Q5VXU3 224 aa31.14■■■□□ 2.58
SNRPA-205ENST00000598923 PPRC1Q5VV67 1664 aaKnown RBP31.13■■■□□ 2.57
SNRPA-205ENST00000598923 GOLGA3Q08378 1498 aa31.13■■■□□ 2.57
SNRPA-205ENST00000598923 FAM9AQ8IZU1 332 aaPredicted RBP31.09■■■□□ 2.57
SNRPA-205ENST00000598923 CSRNP3Q8WYN3 585 aa31.08■■■□□ 2.57
SNRPA-205ENST00000598923 EPRSP07814 1512 aaKnown RBP31.06■■■□□ 2.56
SNRPA-205ENST00000598923 MAP3K4Q9Y6R4 1608 aa31.04■■■□□ 2.56
SNRPA-205ENST00000598923 ABCA8O94911 1581 aa31.03■■■□□ 2.56
SNRPA-205ENST00000598923 WDR7Q9Y4E6 1490 aa30.95■■■□□ 2.54
SNRPA-205ENST00000598923 EEA1Q15075 1411 aa30.92■■■□□ 2.54
SNRPA-205ENST00000598923 SAMD9Q5K651 1589 aa30.88■■■□□ 2.53
SNRPA-205ENST00000598923 TEX14Q8IWB6 1497 aa30.87■■■□□ 2.53
SNRPA-205ENST00000598923 COL17A1Q9UMD9 1497 aaPredicted RBP30.84■■■□□ 2.53
SNRPA-205ENST00000598923 CFAP43Q8NDM7 1665 aa30.82■■■□□ 2.52
SNRPA-205ENST00000598923 P3H3Q8IVL6 736 aa30.8■■■□□ 2.52
SNRPA-205ENST00000598923 KDM4FA0A1W2PPD8 638 aa30.78■■■□□ 2.52
SNRPA-205ENST00000598923 EHMT2Q96KQ7 1210 aa30.77■■■□□ 2.52
SNRPA-205ENST00000598923 MAGI3Q5TCQ9 1506 aa30.75■■■□□ 2.51
SNRPA-205ENST00000598923 ATP10BO94823 1461 aa30.75■■■□□ 2.51
SNRPA-205ENST00000598923 CD109Q6YHK3 1445 aa30.73■■■□□ 2.51
SNRPA-205ENST00000598923 KCNH8Q96L42 1107 aa30.73■■■□□ 2.51
SNRPA-205ENST00000598923 RAPGEF6Q8TEU7 1601 aa30.72■■■□□ 2.51
SNRPA-205ENST00000598923 KIF21BO75037 1637 aa30.71■■■□□ 2.51
SNRPA-205ENST00000598923 RANGAP1P46060 587 aaPredicted RBP30.7■■■□□ 2.51
SNRPA-205ENST00000598923 ARID3CA6NKF2 412 aa30.64■■■□□ 2.5
SNRPA-205ENST00000598923 ABCA9Q8IUA7 1624 aa30.61■■■□□ 2.49
SNRPA-205ENST00000598923 UBTFP17480 764 aaKnown RBP30.6■■■□□ 2.49
SNRPA-205ENST00000598923 FHOD3Q2V2M9 1422 aa30.59■■■□□ 2.49
SNRPA-205ENST00000598923 NUP153P49790 1475 aaKnown RBP30.58■■■□□ 2.49
SNRPA-205ENST00000598923 ADGRL1O94910 1474 aa30.57■■■□□ 2.48
SNRPA-205ENST00000598923 EFCAB5A4FU69 1503 aa30.56■■■□□ 2.48
SNRPA-205ENST00000598923 ARAP3Q8WWN8 1544 aa30.52■■■□□ 2.48
SNRPA-205ENST00000598923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.45■■■□□ 2.47
SNRPA-205ENST00000598923 HNRNPUL2Q1KMD3 747 aaKnown RBP30.45■■■□□ 2.47
SNRPA-205ENST00000598923 PHLDB1Q86UU1 1377 aa30.43■■■□□ 2.46
SNRPA-205ENST00000598923 NEO1Q92859 1461 aa30.39■■■□□ 2.46
SNRPA-205ENST00000598923 PLEKHD1A6NEE1 506 aa30.35■■■□□ 2.45
SNRPA-205ENST00000598923 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.3■■■□□ 2.44
SNRPA-205ENST00000598923 ARHGAP35Q9NRY4 1499 aa30.3■■■□□ 2.44
SNRPA-205ENST00000598923 FRMPD1Q5SYB0 1578 aa30.29■■■□□ 2.44
SNRPA-205ENST00000598923 CDK13Q14004 1512 aaKnown RBP30.28■■■□□ 2.44
SNRPA-205ENST00000598923 RAPGEF3O95398 923 aa30.26■■■□□ 2.43
SNRPA-205ENST00000598923 FMN1Q68DA7 1419 aa30.26■■■□□ 2.43
SNRPA-205ENST00000598923 TTC37Q6PGP7 1564 aa30.26■■■□□ 2.43
SNRPA-205ENST00000598923 HECW1Q76N89 1606 aa30.23■■■□□ 2.43
SNRPA-205ENST00000598923 CFAP74Q9C0B2 1584 aa30.23■■■□□ 2.43
SNRPA-205ENST00000598923 RICTORQ6R327 1708 aa30.22■■■□□ 2.43
SNRPA-205ENST00000598923 FANCAO15360 1455 aa30.19■■■□□ 2.42
SNRPA-205ENST00000598923 AKNAQ7Z591 1439 aa30.18■■■□□ 2.42
SNRPA-205ENST00000598923 DENND4BO75064 1496 aaPredicted RBP30.15■■■□□ 2.42
SNRPA-205ENST00000598923 ATP1B4Q9UN42 357 aaPredicted RBP30.15■■■□□ 2.42
SNRPA-205ENST00000598923 ADAMTSL3P82987 1691 aa30.14■■■□□ 2.42
SNRPA-205ENST00000598923 LRRIQ1Q96JM4 1722 aa30.13■■■□□ 2.41
SNRPA-205ENST00000598923 HECW2Q9P2P5 1572 aa30.13■■■□□ 2.41
SNRPA-205ENST00000598923 ARHGEF40Q8TER5 1519 aa30.1■■■□□ 2.41
SNRPA-205ENST00000598923 PLCH2O75038 1416 aa30.09■■■□□ 2.41
SNRPA-205ENST00000598923 BCORL1Q5H9F3 1711 aa30.09■■■□□ 2.41
SNRPA-205ENST00000598923 MYO5CQ9NQX4 1742 aa30.08■■■□□ 2.41
SNRPA-205ENST00000598923 ZMYM4Q5VZL5 1548 aa30.07■■■□□ 2.4
SNRPA-205ENST00000598923 KIF14Q15058 1648 aa30.05■■■□□ 2.4
SNRPA-205ENST00000598923 CDK11AQ9UQ88 783 aaPredicted RBP30.04■■■□□ 2.4
SNRPA-205ENST00000598923 TROQ12816 1431 aaPredicted RBP30.01■■■□□ 2.39
SNRPA-205ENST00000598923 PTPRMP28827 1452 aa29.99■■■□□ 2.39
SNRPA-205ENST00000598923 MADDQ8WXG6 1647 aa29.98■■■□□ 2.39
SNRPA-205ENST00000598923 PCF11O94913 1555 aaKnown RBP29.98■■■□□ 2.39
SNRPA-205ENST00000598923 LOC105371045A0A1W2PR82 267 aa29.97■■■□□ 2.39
SNRPA-205ENST00000598923 MAGI2Q86UL8 1455 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms