RNA–Protein interactions for RNA: ENST00000598278.5

SMIM7-216, Transcript of small integral membrane protein 7, humanhuman

TSL 3

Gene SMIM7, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-216ENST00000598278 CEP170Q5SW79 1584 aa18.62■□□□□ 0.57
SMIM7-216ENST00000598278 TNIKQ9UKE5 1360 aa18.61■□□□□ 0.57
SMIM7-216ENST00000598278 OSCARQ8IYS5 282 aa18.61■□□□□ 0.57
SMIM7-216ENST00000598278 KIAA0586Q9BVV6 1533 aa18.6■□□□□ 0.57
SMIM7-216ENST00000598278 IQGAP2Q13576 1575 aa18.57■□□□□ 0.56
SMIM7-216ENST00000598278 CLASP1Q7Z460 1538 aa18.53■□□□□ 0.56
SMIM7-216ENST00000598278 JPH4Q96JJ6 628 aa18.48■□□□□ 0.55
SMIM7-216ENST00000598278 UGGT2Q9NYU1 1516 aa18.47■□□□□ 0.55
SMIM7-216ENST00000598278 SHROOM2Q13796 1616 aa18.45■□□□□ 0.54
SMIM7-216ENST00000598278 RANGAP1P46060 587 aaPredicted RBP18.45■□□□□ 0.54
SMIM7-216ENST00000598278 CEP162Q5TB80 1403 aa18.44■□□□□ 0.54
SMIM7-216ENST00000598278 CLIP1P30622 1438 aa18.43■□□□□ 0.54
SMIM7-216ENST00000598278 EFCAB5A4FU69 1503 aa18.43■□□□□ 0.54
SMIM7-216ENST00000598278 CARMIL2Q6F5E8 1435 aa18.41■□□□□ 0.54
SMIM7-216ENST00000598278 PRG4Q92954 1404 aaPredicted RBP18.4■□□□□ 0.54
SMIM7-216ENST00000598278 SAMD9Q5K651 1589 aa18.39■□□□□ 0.53
SMIM7-216ENST00000598278 KIAA0556O60303 1618 aa18.37■□□□□ 0.53
SMIM7-216ENST00000598278 DISP1Q96F81 1524 aa18.36■□□□□ 0.53
SMIM7-216ENST00000598278 ARHGAP35Q9NRY4 1499 aa18.36■□□□□ 0.53
SMIM7-216ENST00000598278 P3H3Q8IVL6 736 aa18.33■□□□□ 0.52
SMIM7-216ENST00000598278 FHOD3Q2V2M9 1422 aa18.3■□□□□ 0.52
SMIM7-216ENST00000598278 ERCC6L2Q5T890 1561 aa18.28■□□□□ 0.52
SMIM7-216ENST00000598278 ARAP1Q96P48 1450 aa18.27■□□□□ 0.52
SMIM7-216ENST00000598278 FMN1Q68DA7 1419 aa18.26■□□□□ 0.51
SMIM7-216ENST00000598278 ARHGEF11O15085 1522 aa18.26■□□□□ 0.51
SMIM7-216ENST00000598278 PTPRGP23470 1445 aa18.24■□□□□ 0.51
SMIM7-216ENST00000598278 RIMBP3CA6NJZ7 1639 aa18.23■□□□□ 0.51
SMIM7-216ENST00000598278 RIMBP3BA6NNM3 1639 aa18.23■□□□□ 0.51
SMIM7-216ENST00000598278 RIMBP3Q9UFD9 1639 aa18.23■□□□□ 0.51
SMIM7-216ENST00000598278 TTBK1Q5TCY1 1321 aaPredicted RBP18.22■□□□□ 0.51
SMIM7-216ENST00000598278 VPS8Q8N3P4 1428 aa18.2■□□□□ 0.5
SMIM7-216ENST00000598278 RAPGEF6Q8TEU7 1601 aa18.16■□□□□ 0.5
SMIM7-216ENST00000598278 DNAJC5Q9H3Z4 198 aa18.15■□□□□ 0.5
SMIM7-216ENST00000598278 CASKIN1Q8WXD9 1431 aa18.14■□□□□ 0.49
SMIM7-216ENST00000598278 UACAQ9BZF9 1416 aa18.14■□□□□ 0.49
SMIM7-216ENST00000598278 ABCA8O94911 1581 aa18.13■□□□□ 0.49
SMIM7-216ENST00000598278 FYCO1Q9BQS8 1478 aa18.13■□□□□ 0.49
SMIM7-216ENST00000598278 PCF11O94913 1555 aaKnown RBP18.13■□□□□ 0.49
SMIM7-216ENST00000598278 HECW1Q76N89 1606 aa18.12■□□□□ 0.49
SMIM7-216ENST00000598278 PLB1Q6P1J6 1458 aa18.12■□□□□ 0.49
SMIM7-216ENST00000598278 ATP1B4Q9UN42 357 aaPredicted RBP18.11■□□□□ 0.49
SMIM7-216ENST00000598278 ABCC2Q92887 1545 aa18.09■□□□□ 0.49
SMIM7-216ENST00000598278 UHRF1BP1LA0JNW5 1464 aa18.09■□□□□ 0.49
SMIM7-216ENST00000598278 APLP2Q06481 763 aa18.08■□□□□ 0.48
SMIM7-216ENST00000598278 CYB5RLQ6IPT4 315 aa18.08■□□□□ 0.48
SMIM7-216ENST00000598278 NUP153P49790 1475 aaKnown RBP18.05■□□□□ 0.48
SMIM7-216ENST00000598278 CCDC18Q5T9S5 1454 aa18.05■□□□□ 0.48
SMIM7-216ENST00000598278 ADCY10Q96PN6 1610 aa18.05■□□□□ 0.48
SMIM7-216ENST00000598278 EPRSP07814 1512 aaKnown RBP18.02■□□□□ 0.47
SMIM7-216ENST00000598278 LRRIQ1Q96JM4 1722 aa18.01■□□□□ 0.47
SMIM7-216ENST00000598278 NPM1P06748 294 aaKnown RBP eCLIP18.01■□□□□ 0.47
SMIM7-216ENST00000598278 MAP3K1Q13233 1512 aa18■□□□□ 0.47
SMIM7-216ENST00000598278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
SMIM7-216ENST00000598278 HNRNPUL2Q1KMD3 747 aaKnown RBP18■□□□□ 0.47
SMIM7-216ENST00000598278 KDM5BQ9UGL1 1544 aa17.99■□□□□ 0.47
SMIM7-216ENST00000598278 CFAP43Q8NDM7 1665 aa17.99■□□□□ 0.47
SMIM7-216ENST00000598278 ARID3CA6NKF2 412 aa17.98■□□□□ 0.47
SMIM7-216ENST00000598278 CDK11AQ9UQ88 783 aaPredicted RBP17.98■□□□□ 0.47
SMIM7-216ENST00000598278 ATP10BO94823 1461 aa17.98■□□□□ 0.47
SMIM7-216ENST00000598278 ZCCHC11Q5TAX3 1644 aaKnown RBP17.98■□□□□ 0.47
SMIM7-216ENST00000598278 TIAM1Q13009 1591 aa17.97■□□□□ 0.47
SMIM7-216ENST00000598278 CDK13Q14004 1512 aaKnown RBP17.97■□□□□ 0.47
SMIM7-216ENST00000598278 PLEKHD1A6NEE1 506 aa17.93■□□□□ 0.46
SMIM7-216ENST00000598278 MTUS2Q5JR59 1369 aa17.91■□□□□ 0.46
SMIM7-216ENST00000598278 LRRC9Q6ZRR7 1453 aa17.88■□□□□ 0.45
SMIM7-216ENST00000598278 EHBP1L1Q8N3D4 1523 aa17.88■□□□□ 0.45
SMIM7-216ENST00000598278 TROQ12816 1431 aaPredicted RBP17.87■□□□□ 0.45
SMIM7-216ENST00000598278 MAPKBP1O60336 1514 aa17.86■□□□□ 0.45
SMIM7-216ENST00000598278 KANK4Q5T7N3 995 aaPredicted RBP17.85■□□□□ 0.45
SMIM7-216ENST00000598278 ASXL2Q76L83 1435 aa17.85■□□□□ 0.45
SMIM7-216ENST00000598278 WDR7Q9Y4E6 1490 aa17.84■□□□□ 0.45
SMIM7-216ENST00000598278 SUPT6HQ7KZ85 1726 aaKnown RBP17.84■□□□□ 0.45
SMIM7-216ENST00000598278 MAGI3Q5TCQ9 1506 aa17.83■□□□□ 0.45
SMIM7-216ENST00000598278 KIF14Q15058 1648 aa17.81■□□□□ 0.44
SMIM7-216ENST00000598278 PPARGC1BQ86YN6 1023 aaKnown RBP17.8■□□□□ 0.44
SMIM7-216ENST00000598278 KCNH8Q96L42 1107 aa17.79■□□□□ 0.44
SMIM7-216ENST00000598278 NCOA2Q15596 1464 aa17.75■□□□□ 0.43
SMIM7-216ENST00000598278 CCNB3Q8WWL7 1395 aa17.72■□□□□ 0.43
SMIM7-216ENST00000598278 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.72■□□□□ 0.43
SMIM7-216ENST00000598278 ABCA9Q8IUA7 1624 aa17.71■□□□□ 0.43
SMIM7-216ENST00000598278 ABCC10Q5T3U5 1492 aa17.7■□□□□ 0.42
SMIM7-216ENST00000598278 ITSN2Q9NZM3 1697 aa17.7■□□□□ 0.42
SMIM7-216ENST00000598278 GLI2P10070 1586 aa17.7■□□□□ 0.42
SMIM7-216ENST00000598278 TTC37Q6PGP7 1564 aa17.69■□□□□ 0.42
SMIM7-216ENST00000598278 DIP2BQ9P265 1576 aa17.69■□□□□ 0.42
SMIM7-216ENST00000598278 MYO5CQ9NQX4 1742 aa17.69■□□□□ 0.42
SMIM7-216ENST00000598278 CDC42BPAQ5VT25 1732 aa17.67■□□□□ 0.42
SMIM7-216ENST00000598278 FAM69CQ0P6D2 419 aa17.67■□□□□ 0.42
SMIM7-216ENST00000598278 PHLDB1Q86UU1 1377 aa17.66■□□□□ 0.42
SMIM7-216ENST00000598278 MYOM3Q5VTT5 1437 aa17.66■□□□□ 0.42
SMIM7-216ENST00000598278 KIF13AQ9H1H9 1805 aa17.65■□□□□ 0.42
SMIM7-216ENST00000598278 GPATCH8Q9UKJ3 1502 aaKnown RBP17.64■□□□□ 0.41
SMIM7-216ENST00000598278 PREX2Q70Z35 1606 aa17.64■□□□□ 0.41
SMIM7-216ENST00000598278 CD109Q6YHK3 1445 aa17.64■□□□□ 0.41
SMIM7-216ENST00000598278 MAP3K4Q9Y6R4 1608 aa17.63■□□□□ 0.41
SMIM7-216ENST00000598278 CDC42BPBQ9Y5S2 1711 aa17.63■□□□□ 0.41
SMIM7-216ENST00000598278 PLCH2O75038 1416 aa17.63■□□□□ 0.41
SMIM7-216ENST00000598278 MIA2Q96PC5 1412 aa17.63■□□□□ 0.41
SMIM7-216ENST00000598278 ARAP3Q8WWN8 1544 aa17.62■□□□□ 0.41
SMIM7-216ENST00000598278 CFDP1Q9UEE9 299 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms