RNA–Protein interactions for RNA: ENST00000597573.1

PDE4C-212, Transcript of phosphodiesterase 4C, humanhuman

TSL 2

Gene PDE4C, Length 603 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-212ENST00000597573 NUP160Q12769 1436 aa25.12■■□□□ 1.61
PDE4C-212ENST00000597573 CEP170Q5SW79 1584 aa25.1■■□□□ 1.61
PDE4C-212ENST00000597573 KIAA0586Q9BVV6 1533 aa25.06■■□□□ 1.6
PDE4C-212ENST00000597573 IQGAP2Q13576 1575 aa25.05■■□□□ 1.6
PDE4C-212ENST00000597573 CEP162Q5TB80 1403 aa25.03■■□□□ 1.6
PDE4C-212ENST00000597573 CLIP1P30622 1438 aa24.96■■□□□ 1.59
PDE4C-212ENST00000597573 CLASP1Q7Z460 1538 aa24.94■■□□□ 1.58
PDE4C-212ENST00000597573 UGGT2Q9NYU1 1516 aa24.93■■□□□ 1.58
PDE4C-212ENST00000597573 EFCAB5A4FU69 1503 aa24.91■■□□□ 1.58
PDE4C-212ENST00000597573 SAMD9Q5K651 1589 aa24.88■■□□□ 1.57
PDE4C-212ENST00000597573 ARHGAP35Q9NRY4 1499 aa24.88■■□□□ 1.57
PDE4C-212ENST00000597573 RANGAP1P46060 587 aaPredicted RBP24.87■■□□□ 1.57
PDE4C-212ENST00000597573 SHROOM2Q13796 1616 aa24.86■■□□□ 1.57
PDE4C-212ENST00000597573 OSCARQ8IYS5 282 aa24.84■■□□□ 1.57
PDE4C-212ENST00000597573 JPH4Q96JJ6 628 aa24.81■■□□□ 1.56
PDE4C-212ENST00000597573 ARAP1Q96P48 1450 aa24.8■■□□□ 1.56
PDE4C-212ENST00000597573 DISP1Q96F81 1524 aa24.8■■□□□ 1.56
PDE4C-212ENST00000597573 KIAA0556O60303 1618 aa24.79■■□□□ 1.56
PDE4C-212ENST00000597573 CARMIL2Q6F5E8 1435 aa24.75■■□□□ 1.55
PDE4C-212ENST00000597573 FHOD3Q2V2M9 1422 aa24.74■■□□□ 1.55
PDE4C-212ENST00000597573 PRG4Q92954 1404 aaPredicted RBP24.74■■□□□ 1.55
PDE4C-212ENST00000597573 VPS8Q8N3P4 1428 aa24.69■■□□□ 1.54
PDE4C-212ENST00000597573 P3H3Q8IVL6 736 aa24.69■■□□□ 1.54
PDE4C-212ENST00000597573 FMN1Q68DA7 1419 aa24.65■■□□□ 1.54
PDE4C-212ENST00000597573 ERCC6L2Q5T890 1561 aa24.64■■□□□ 1.54
PDE4C-212ENST00000597573 PCF11O94913 1555 aaKnown RBP24.57■■□□□ 1.52
PDE4C-212ENST00000597573 FYCO1Q9BQS8 1478 aa24.54■■□□□ 1.52
PDE4C-212ENST00000597573 CASKIN1Q8WXD9 1431 aa24.53■■□□□ 1.52
PDE4C-212ENST00000597573 PTPRGP23470 1445 aa24.52■■□□□ 1.52
PDE4C-212ENST00000597573 ARHGEF11O15085 1522 aa24.5■■□□□ 1.51
PDE4C-212ENST00000597573 RAPGEF6Q8TEU7 1601 aa24.49■■□□□ 1.51
PDE4C-212ENST00000597573 HECW1Q76N89 1606 aa24.48■■□□□ 1.51
PDE4C-212ENST00000597573 ABCA8O94911 1581 aa24.47■■□□□ 1.51
PDE4C-212ENST00000597573 TTBK1Q5TCY1 1321 aaPredicted RBP24.46■■□□□ 1.51
PDE4C-212ENST00000597573 PLB1Q6P1J6 1458 aa24.45■■□□□ 1.51
PDE4C-212ENST00000597573 RIMBP3CA6NJZ7 1639 aa24.42■■□□□ 1.5
PDE4C-212ENST00000597573 RIMBP3BA6NNM3 1639 aa24.42■■□□□ 1.5
PDE4C-212ENST00000597573 RIMBP3Q9UFD9 1639 aa24.42■■□□□ 1.5
PDE4C-212ENST00000597573 UACAQ9BZF9 1416 aa24.4■■□□□ 1.5
PDE4C-212ENST00000597573 MAP3K1Q13233 1512 aa24.4■■□□□ 1.5
PDE4C-212ENST00000597573 NUP153P49790 1475 aaKnown RBP24.39■■□□□ 1.5
PDE4C-212ENST00000597573 CFAP43Q8NDM7 1665 aa24.39■■□□□ 1.49
PDE4C-212ENST00000597573 LRRIQ1Q96JM4 1722 aa24.38■■□□□ 1.49
PDE4C-212ENST00000597573 CCDC18Q5T9S5 1454 aa24.38■■□□□ 1.49
PDE4C-212ENST00000597573 ABCC2Q92887 1545 aa24.37■■□□□ 1.49
PDE4C-212ENST00000597573 TIAM1Q13009 1591 aa24.37■■□□□ 1.49
PDE4C-212ENST00000597573 APLP2Q06481 763 aa24.36■■□□□ 1.49
PDE4C-212ENST00000597573 ATP1B4Q9UN42 357 aaPredicted RBP24.36■■□□□ 1.49
PDE4C-212ENST00000597573 UHRF1BP1LA0JNW5 1464 aa24.36■■□□□ 1.49
PDE4C-212ENST00000597573 EPRSP07814 1512 aaKnown RBP24.35■■□□□ 1.49
PDE4C-212ENST00000597573 CDK13Q14004 1512 aaKnown RBP24.3■■□□□ 1.48
PDE4C-212ENST00000597573 ADCY10Q96PN6 1610 aa24.29■■□□□ 1.48
PDE4C-212ENST00000597573 ATP10BO94823 1461 aa24.25■■□□□ 1.47
PDE4C-212ENST00000597573 KDM5BQ9UGL1 1544 aa24.24■■□□□ 1.47
PDE4C-212ENST00000597573 LRRC9Q6ZRR7 1453 aa24.23■■□□□ 1.47
PDE4C-212ENST00000597573 ARID3CA6NKF2 412 aa24.21■■□□□ 1.47
PDE4C-212ENST00000597573 ZCCHC11Q5TAX3 1644 aaKnown RBP24.2■■□□□ 1.46
PDE4C-212ENST00000597573 EHBP1L1Q8N3D4 1523 aa24.2■■□□□ 1.46
PDE4C-212ENST00000597573 KANK4Q5T7N3 995 aaPredicted RBP24.18■■□□□ 1.46
PDE4C-212ENST00000597573 MAGI3Q5TCQ9 1506 aa24.17■■□□□ 1.46
PDE4C-212ENST00000597573 MTUS2Q5JR59 1369 aa24.16■■□□□ 1.46
PDE4C-212ENST00000597573 CYB5RLQ6IPT4 315 aa24.16■■□□□ 1.46
PDE4C-212ENST00000597573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.15■■□□□ 1.46
PDE4C-212ENST00000597573 HNRNPUL2Q1KMD3 747 aaKnown RBP24.15■■□□□ 1.46
PDE4C-212ENST00000597573 CDK11AQ9UQ88 783 aaPredicted RBP24.15■■□□□ 1.46
PDE4C-212ENST00000597573 PPARGC1BQ86YN6 1023 aaKnown RBP24.14■■□□□ 1.45
PDE4C-212ENST00000597573 TROQ12816 1431 aaPredicted RBP24.12■■□□□ 1.45
PDE4C-212ENST00000597573 DNAJC5Q9H3Z4 198 aa24.1■■□□□ 1.45
PDE4C-212ENST00000597573 SUPT6HQ7KZ85 1726 aaKnown RBP24.09■■□□□ 1.45
PDE4C-212ENST00000597573 PLEKHD1A6NEE1 506 aa24.07■■□□□ 1.44
PDE4C-212ENST00000597573 NPM1P06748 294 aaKnown RBP eCLIP24.06■■□□□ 1.44
PDE4C-212ENST00000597573 KIF14Q15058 1648 aa24.02■■□□□ 1.44
PDE4C-212ENST00000597573 NCOA2Q15596 1464 aa24.02■■□□□ 1.44
PDE4C-212ENST00000597573 WDR7Q9Y4E6 1490 aa24.01■■□□□ 1.43
PDE4C-212ENST00000597573 ASXL2Q76L83 1435 aa24.01■■□□□ 1.43
PDE4C-212ENST00000597573 MAPKBP1O60336 1514 aa24■■□□□ 1.43
PDE4C-212ENST00000597573 PHLDB1Q86UU1 1377 aa23.95■■□□□ 1.42
PDE4C-212ENST00000597573 ABCC10Q5T3U5 1492 aa23.94■■□□□ 1.42
PDE4C-212ENST00000597573 MYOM3Q5VTT5 1437 aa23.91■■□□□ 1.42
PDE4C-212ENST00000597573 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.89■■□□□ 1.42
PDE4C-212ENST00000597573 TTC37Q6PGP7 1564 aa23.89■■□□□ 1.41
PDE4C-212ENST00000597573 CCNB3Q8WWL7 1395 aa23.89■■□□□ 1.41
PDE4C-212ENST00000597573 ITSN2Q9NZM3 1697 aa23.89■■□□□ 1.41
PDE4C-212ENST00000597573 RRBP1Q9P2E9 1410 aaKnown RBP23.87■■□□□ 1.41
PDE4C-212ENST00000597573 KCNH8Q96L42 1107 aa23.86■■□□□ 1.41
PDE4C-212ENST00000597573 FGD6Q6ZV73 1430 aa23.85■■□□□ 1.41
PDE4C-212ENST00000597573 ABCA9Q8IUA7 1624 aa23.85■■□□□ 1.41
PDE4C-212ENST00000597573 CDC42BPAQ5VT25 1732 aa23.85■■□□□ 1.41
PDE4C-212ENST00000597573 GPATCH8Q9UKJ3 1502 aaKnown RBP23.84■■□□□ 1.41
PDE4C-212ENST00000597573 TRIM26Q12899 539 aaPredicted RBP23.84■■□□□ 1.41
PDE4C-212ENST00000597573 PREX2Q70Z35 1606 aa23.83■■□□□ 1.41
PDE4C-212ENST00000597573 MIA2Q96PC5 1412 aa23.83■■□□□ 1.4
PDE4C-212ENST00000597573 MYO5CQ9NQX4 1742 aa23.82■■□□□ 1.4
PDE4C-212ENST00000597573 GLI2P10070 1586 aa23.79■■□□□ 1.4
PDE4C-212ENST00000597573 PTPN23Q9H3S7 1636 aa23.78■■□□□ 1.4
PDE4C-212ENST00000597573 DIP2BQ9P265 1576 aa23.78■■□□□ 1.4
PDE4C-212ENST00000597573 ARAP3Q8WWN8 1544 aa23.77■■□□□ 1.4
PDE4C-212ENST00000597573 CDC42BPBQ9Y5S2 1711 aa23.76■■□□□ 1.39
PDE4C-212ENST00000597573 TCOF1Q13428 1488 aaKnown RBP23.76■■□□□ 1.39
PDE4C-212ENST00000597573 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms