RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 IGF1RP08069 1367 aa18.76■□□□□ 0.59
SH2D3A-206ENST00000597254 LOC105371045A0A1W2PR82 267 aa18.73■□□□□ 0.59
SH2D3A-206ENST00000597254 ERCC6L2Q5T890 1561 aa18.68■□□□□ 0.58
SH2D3A-206ENST00000597254 EHMT2Q96KQ7 1210 aa18.67■□□□□ 0.58
SH2D3A-206ENST00000597254 SHROOM2Q13796 1616 aa18.67■□□□□ 0.58
SH2D3A-206ENST00000597254 CARMIL1Q5VZK9 1371 aa18.66■□□□□ 0.58
SH2D3A-206ENST00000597254 PRXQ9BXM0 1461 aa18.65■□□□□ 0.58
SH2D3A-206ENST00000597254 JPH4Q96JJ6 628 aa18.64■□□□□ 0.57
SH2D3A-206ENST00000597254 PRG4Q92954 1404 aaPredicted RBP18.63■□□□□ 0.57
SH2D3A-206ENST00000597254 KIF21BO75037 1637 aa18.62■□□□□ 0.57
SH2D3A-206ENST00000597254 CUL7Q14999 1698 aa18.59■□□□□ 0.57
SH2D3A-206ENST00000597254 GOLGA3Q08378 1498 aa18.58■□□□□ 0.57
SH2D3A-206ENST00000597254 RAPGEF2Q9Y4G8 1499 aa18.58■□□□□ 0.57
SH2D3A-206ENST00000597254 UBTFP17480 764 aaKnown RBP18.56■□□□□ 0.56
SH2D3A-206ENST00000597254 KIAA0586Q9BVV6 1533 aa18.54■□□□□ 0.56
SH2D3A-206ENST00000597254 TNIKQ9UKE5 1360 aa18.5■□□□□ 0.55
SH2D3A-206ENST00000597254 NPM1P06748 294 aaKnown RBP eCLIP18.46■□□□□ 0.55
SH2D3A-206ENST00000597254 CARMIL2Q6F5E8 1435 aa18.39■□□□□ 0.53
SH2D3A-206ENST00000597254 TTBK1Q5TCY1 1321 aaPredicted RBP18.37■□□□□ 0.53
SH2D3A-206ENST00000597254 PTPRGP23470 1445 aa18.37■□□□□ 0.53
SH2D3A-206ENST00000597254 IQGAP2Q13576 1575 aa18.36■□□□□ 0.53
SH2D3A-206ENST00000597254 ADCY10Q96PN6 1610 aa18.35■□□□□ 0.53
SH2D3A-206ENST00000597254 KIF13AQ9H1H9 1805 aa18.33■□□□□ 0.53
SH2D3A-206ENST00000597254 RANGAP1P46060 587 aaPredicted RBP18.33■□□□□ 0.52
SH2D3A-206ENST00000597254 FAM69CQ0P6D2 419 aa18.33■□□□□ 0.52
SH2D3A-206ENST00000597254 CTTNBP2Q8WZ74 1663 aa18.33■□□□□ 0.52
SH2D3A-206ENST00000597254 CEP162Q5TB80 1403 aa18.32■□□□□ 0.52
SH2D3A-206ENST00000597254 MAPKBP1O60336 1514 aa18.32■□□□□ 0.52
SH2D3A-206ENST00000597254 ABCC10Q5T3U5 1492 aa18.3■□□□□ 0.52
SH2D3A-206ENST00000597254 CLIP1P30622 1438 aa18.27■□□□□ 0.52
SH2D3A-206ENST00000597254 DISP1Q96F81 1524 aa18.24■□□□□ 0.51
SH2D3A-206ENST00000597254 UGGT2Q9NYU1 1516 aa18.24■□□□□ 0.51
SH2D3A-206ENST00000597254 DIP2BQ9P265 1576 aa18.24■□□□□ 0.51
SH2D3A-206ENST00000597254 ABCC2Q92887 1545 aa18.23■□□□□ 0.51
SH2D3A-206ENST00000597254 UACAQ9BZF9 1416 aa18.21■□□□□ 0.51
SH2D3A-206ENST00000597254 ARHGAP35Q9NRY4 1499 aa18.2■□□□□ 0.5
SH2D3A-206ENST00000597254 AEBP2Q6ZN18 517 aaPredicted RBP18.2■□□□□ 0.5
SH2D3A-206ENST00000597254 UHRF1BP1LA0JNW5 1464 aa18.2■□□□□ 0.5
SH2D3A-206ENST00000597254 P3H3Q8IVL6 736 aa18.18■□□□□ 0.5
SH2D3A-206ENST00000597254 KIAA0556O60303 1618 aa18.18■□□□□ 0.5
SH2D3A-206ENST00000597254 ASXL2Q76L83 1435 aa18.16■□□□□ 0.5
SH2D3A-206ENST00000597254 PLB1Q6P1J6 1458 aa18.16■□□□□ 0.5
SH2D3A-206ENST00000597254 EFCAB5A4FU69 1503 aa18.15■□□□□ 0.5
SH2D3A-206ENST00000597254 TSPOAP1O95153 1857 aa18.14■□□□□ 0.49
SH2D3A-206ENST00000597254 SAMD9Q5K651 1589 aa18.13■□□□□ 0.49
SH2D3A-206ENST00000597254 KDM5BQ9UGL1 1544 aa18.11■□□□□ 0.49
SH2D3A-206ENST00000597254 FHOD3Q2V2M9 1422 aa18.09■□□□□ 0.49
SH2D3A-206ENST00000597254 KDM6BO15054 1643 aa18.08■□□□□ 0.48
SH2D3A-206ENST00000597254 GLI2P10070 1586 aa18.07■□□□□ 0.48
SH2D3A-206ENST00000597254 VPS8Q8N3P4 1428 aa18.06■□□□□ 0.48
SH2D3A-206ENST00000597254 ZCCHC11Q5TAX3 1644 aaKnown RBP18.06■□□□□ 0.48
SH2D3A-206ENST00000597254 EPRSP07814 1512 aaKnown RBP18.03■□□□□ 0.48
SH2D3A-206ENST00000597254 ABCA8O94911 1581 aa18■□□□□ 0.47
SH2D3A-206ENST00000597254 FMN1Q68DA7 1419 aa18■□□□□ 0.47
SH2D3A-206ENST00000597254 WDR7Q9Y4E6 1490 aa18■□□□□ 0.47
SH2D3A-206ENST00000597254 PPRC1Q5VV67 1664 aaKnown RBP17.97■□□□□ 0.47
SH2D3A-206ENST00000597254 TEX14Q8IWB6 1497 aa17.96■□□□□ 0.47
SH2D3A-206ENST00000597254 KCNH8Q96L42 1107 aa17.96■□□□□ 0.47
SH2D3A-206ENST00000597254 MAP3K4Q9Y6R4 1608 aa17.96■□□□□ 0.47
SH2D3A-206ENST00000597254 ATP1B4Q9UN42 357 aaPredicted RBP17.95■□□□□ 0.46
SH2D3A-206ENST00000597254 CASKIN1Q8WXD9 1431 aa17.94■□□□□ 0.46
SH2D3A-206ENST00000597254 ARID3CA6NKF2 412 aa17.93■□□□□ 0.46
SH2D3A-206ENST00000597254 APLP2Q06481 763 aa17.93■□□□□ 0.46
SH2D3A-206ENST00000597254 PCF11O94913 1555 aaKnown RBP17.91■□□□□ 0.46
SH2D3A-206ENST00000597254 CD109Q6YHK3 1445 aa17.89■□□□□ 0.46
SH2D3A-206ENST00000597254 FYCO1Q9BQS8 1478 aa17.88■□□□□ 0.45
SH2D3A-206ENST00000597254 ATP10BO94823 1461 aa17.88■□□□□ 0.45
SH2D3A-206ENST00000597254 COL17A1Q9UMD9 1497 aaPredicted RBP17.87■□□□□ 0.45
SH2D3A-206ENST00000597254 CFAP43Q8NDM7 1665 aa17.87■□□□□ 0.45
SH2D3A-206ENST00000597254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.86■□□□□ 0.45
SH2D3A-206ENST00000597254 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
SH2D3A-206ENST00000597254 PPARGC1BQ86YN6 1023 aaKnown RBP17.86■□□□□ 0.45
SH2D3A-206ENST00000597254 RAPGEF6Q8TEU7 1601 aa17.86■□□□□ 0.45
SH2D3A-206ENST00000597254 KDM4FA0A1W2PPD8 638 aa17.85■□□□□ 0.45
SH2D3A-206ENST00000597254 MAGI3Q5TCQ9 1506 aa17.85■□□□□ 0.45
SH2D3A-206ENST00000597254 MAP3K1Q13233 1512 aa17.82■□□□□ 0.44
SH2D3A-206ENST00000597254 HECW1Q76N89 1606 aa17.82■□□□□ 0.44
SH2D3A-206ENST00000597254 KANK4Q5T7N3 995 aaPredicted RBP17.81■□□□□ 0.44
SH2D3A-206ENST00000597254 NUP153P49790 1475 aaKnown RBP17.81■□□□□ 0.44
SH2D3A-206ENST00000597254 LRRIQ1Q96JM4 1722 aa17.8■□□□□ 0.44
SH2D3A-206ENST00000597254 TIAM1Q13009 1591 aa17.79■□□□□ 0.44
SH2D3A-206ENST00000597254 CCDC18Q5T9S5 1454 aa17.78■□□□□ 0.44
SH2D3A-206ENST00000597254 PLEKHD1A6NEE1 506 aa17.75■□□□□ 0.43
SH2D3A-206ENST00000597254 CDK13Q14004 1512 aaKnown RBP17.74■□□□□ 0.43
SH2D3A-206ENST00000597254 ABCA9Q8IUA7 1624 aa17.74■□□□□ 0.43
SH2D3A-206ENST00000597254 ADGRL1O94910 1474 aa17.74■□□□□ 0.43
SH2D3A-206ENST00000597254 LRRC9Q6ZRR7 1453 aa17.73■□□□□ 0.43
SH2D3A-206ENST00000597254 PHLDB1Q86UU1 1377 aa17.72■□□□□ 0.43
SH2D3A-206ENST00000597254 CDK11AQ9UQ88 783 aaPredicted RBP17.71■□□□□ 0.43
SH2D3A-206ENST00000597254 ARAP3Q8WWN8 1544 aa17.71■□□□□ 0.43
SH2D3A-206ENST00000597254 MTUS2Q5JR59 1369 aa17.69■□□□□ 0.42
SH2D3A-206ENST00000597254 NEO1Q92859 1461 aa17.67■□□□□ 0.42
SH2D3A-206ENST00000597254 EHBP1L1Q8N3D4 1523 aa17.63■□□□□ 0.41
SH2D3A-206ENST00000597254 RAPGEF3O95398 923 aa17.63■□□□□ 0.41
SH2D3A-206ENST00000597254 TRIM26Q12899 539 aaPredicted RBP17.62■□□□□ 0.41
SH2D3A-206ENST00000597254 TROQ12816 1431 aaPredicted RBP17.62■□□□□ 0.41
SH2D3A-206ENST00000597254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.59■□□□□ 0.41
SH2D3A-206ENST00000597254 SUPT6HQ7KZ85 1726 aaKnown RBP17.58■□□□□ 0.4
SH2D3A-206ENST00000597254 FANCAO15360 1455 aa17.57■□□□□ 0.4
SH2D3A-206ENST00000597254 NCOA2Q15596 1464 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms