RNA–Protein interactions for RNA: ENST00000597057.1

EMP3-205, Transcript of epithelial membrane protein 3, humanhuman

TSL 2

Gene EMP3, Length 406 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-205ENST00000597057 RAPGEF2Q9Y4G8 1499 aa19.77■□□□□ 0.76
EMP3-205ENST00000597057 ARHGEF11O15085 1522 aa19.66■□□□□ 0.74
EMP3-205ENST00000597057 KIAA0586Q9BVV6 1533 aa19.66■□□□□ 0.74
EMP3-205ENST00000597057 KIF21BO75037 1637 aa19.62■□□□□ 0.73
EMP3-205ENST00000597057 SHROOM2Q13796 1616 aa19.61■□□□□ 0.73
EMP3-205ENST00000597057 TRHP20396 242 aaPredicted RBP19.59■□□□□ 0.73
EMP3-205ENST00000597057 JPH4Q96JJ6 628 aa19.59■□□□□ 0.73
EMP3-205ENST00000597057 AEBP2Q6ZN18 517 aaPredicted RBP19.58■□□□□ 0.72
EMP3-205ENST00000597057 IQGAP2Q13576 1575 aa19.57■□□□□ 0.72
EMP3-205ENST00000597057 ERCC6L2Q5T890 1561 aa19.54■□□□□ 0.72
EMP3-205ENST00000597057 PRG4Q92954 1404 aaPredicted RBP19.54■□□□□ 0.72
EMP3-205ENST00000597057 CYB5RLQ6IPT4 315 aa19.54■□□□□ 0.72
EMP3-205ENST00000597057 CTTNBP2Q8WZ74 1663 aa19.53■□□□□ 0.72
EMP3-205ENST00000597057 EHMT2Q96KQ7 1210 aa19.53■□□□□ 0.72
EMP3-205ENST00000597057 GOLGA3Q08378 1498 aa19.52■□□□□ 0.72
EMP3-205ENST00000597057 ARAP1Q96P48 1450 aa19.48■□□□□ 0.71
EMP3-205ENST00000597057 UGGT2Q9NYU1 1516 aa19.47■□□□□ 0.71
EMP3-205ENST00000597057 UBTFP17480 764 aaKnown RBP19.46■□□□□ 0.71
EMP3-205ENST00000597057 DISP1Q96F81 1524 aa19.45■□□□□ 0.7
EMP3-205ENST00000597057 CARMIL2Q6F5E8 1435 aa19.42■□□□□ 0.7
EMP3-205ENST00000597057 KIAA0556O60303 1618 aa19.38■□□□□ 0.69
EMP3-205ENST00000597057 RANGAP1P46060 587 aaPredicted RBP19.36■□□□□ 0.69
EMP3-205ENST00000597057 TNIKQ9UKE5 1360 aa19.35■□□□□ 0.69
EMP3-205ENST00000597057 SAMD9Q5K651 1589 aa19.33■□□□□ 0.69
EMP3-205ENST00000597057 PTPRGP23470 1445 aa19.33■□□□□ 0.68
EMP3-205ENST00000597057 LOC105371045A0A1W2PR82 267 aa19.32■□□□□ 0.68
EMP3-205ENST00000597057 P3H3Q8IVL6 736 aa19.31■□□□□ 0.68
EMP3-205ENST00000597057 TTBK1Q5TCY1 1321 aaPredicted RBP19.3■□□□□ 0.68
EMP3-205ENST00000597057 EFCAB5A4FU69 1503 aa19.27■□□□□ 0.68
EMP3-205ENST00000597057 ARHGAP35Q9NRY4 1499 aa19.24■□□□□ 0.67
EMP3-205ENST00000597057 FHOD3Q2V2M9 1422 aa19.24■□□□□ 0.67
EMP3-205ENST00000597057 ADCY10Q96PN6 1610 aa19.21■□□□□ 0.67
EMP3-205ENST00000597057 UACAQ9BZF9 1416 aa19.2■□□□□ 0.66
EMP3-205ENST00000597057 PLB1Q6P1J6 1458 aa19.19■□□□□ 0.66
EMP3-205ENST00000597057 CLIP1P30622 1438 aa19.18■□□□□ 0.66
EMP3-205ENST00000597057 UHRF1BP1LA0JNW5 1464 aa19.18■□□□□ 0.66
EMP3-205ENST00000597057 ABCC2Q92887 1545 aa19.16■□□□□ 0.66
EMP3-205ENST00000597057 ABCA8O94911 1581 aa19.16■□□□□ 0.66
EMP3-205ENST00000597057 CEP162Q5TB80 1403 aa19.16■□□□□ 0.66
EMP3-205ENST00000597057 FMN1Q68DA7 1419 aa19.09■□□□□ 0.65
EMP3-205ENST00000597057 NPM1P06748 294 aaKnown RBP eCLIP19.09■□□□□ 0.65
EMP3-205ENST00000597057 KDM5BQ9UGL1 1544 aa19.09■□□□□ 0.65
EMP3-205ENST00000597057 RAPGEF6Q8TEU7 1601 aa19.08■□□□□ 0.65
EMP3-205ENST00000597057 NUP153P49790 1475 aaKnown RBP19.05■□□□□ 0.64
EMP3-205ENST00000597057 ZCCHC11Q5TAX3 1644 aaKnown RBP19.03■□□□□ 0.64
EMP3-205ENST00000597057 ARID3CA6NKF2 412 aa19.03■□□□□ 0.64
EMP3-205ENST00000597057 MAPKBP1O60336 1514 aa19.03■□□□□ 0.64
EMP3-205ENST00000597057 ATP10BO94823 1461 aa19.02■□□□□ 0.63
EMP3-205ENST00000597057 ASXL2Q76L83 1435 aa18.99■□□□□ 0.63
EMP3-205ENST00000597057 CASKIN1Q8WXD9 1431 aa18.99■□□□□ 0.63
EMP3-205ENST00000597057 PCF11O94913 1555 aaKnown RBP18.98■□□□□ 0.63
EMP3-205ENST00000597057 ATP1B4Q9UN42 357 aaPredicted RBP18.97■□□□□ 0.63
EMP3-205ENST00000597057 HECW1Q76N89 1606 aa18.96■□□□□ 0.63
EMP3-205ENST00000597057 FYCO1Q9BQS8 1478 aa18.94■□□□□ 0.62
EMP3-205ENST00000597057 EPRSP07814 1512 aaKnown RBP18.94■□□□□ 0.62
EMP3-205ENST00000597057 CDK13Q14004 1512 aaKnown RBP18.94■□□□□ 0.62
EMP3-205ENST00000597057 ABCC10Q5T3U5 1492 aa18.93■□□□□ 0.62
EMP3-205ENST00000597057 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.93■□□□□ 0.62
EMP3-205ENST00000597057 HNRNPUL2Q1KMD3 747 aaKnown RBP18.93■□□□□ 0.62
EMP3-205ENST00000597057 WDR7Q9Y4E6 1490 aa18.92■□□□□ 0.62
EMP3-205ENST00000597057 LRRIQ1Q96JM4 1722 aa18.91■□□□□ 0.62
EMP3-205ENST00000597057 VPS8Q8N3P4 1428 aa18.91■□□□□ 0.62
EMP3-205ENST00000597057 DIP2BQ9P265 1576 aa18.89■□□□□ 0.62
EMP3-205ENST00000597057 FAM69CQ0P6D2 419 aa18.88■□□□□ 0.61
EMP3-205ENST00000597057 KIF13AQ9H1H9 1805 aa18.86■□□□□ 0.61
EMP3-205ENST00000597057 CCDC18Q5T9S5 1454 aa18.86■□□□□ 0.61
EMP3-205ENST00000597057 PLEKHD1A6NEE1 506 aa18.86■□□□□ 0.61
EMP3-205ENST00000597057 KCNH8Q96L42 1107 aa18.85■□□□□ 0.61
EMP3-205ENST00000597057 ILDR1Q86SU0 546 aaPredicted RBP18.84■□□□□ 0.61
EMP3-205ENST00000597057 GLI2P10070 1586 aa18.84■□□□□ 0.61
EMP3-205ENST00000597057 CDK11AQ9UQ88 783 aaPredicted RBP18.81■□□□□ 0.6
EMP3-205ENST00000597057 MAGI3Q5TCQ9 1506 aa18.79■□□□□ 0.6
EMP3-205ENST00000597057 TROQ12816 1431 aaPredicted RBP18.77■□□□□ 0.6
EMP3-205ENST00000597057 MAP3K4Q9Y6R4 1608 aa18.76■□□□□ 0.59
EMP3-205ENST00000597057 ABCA9Q8IUA7 1624 aa18.74■□□□□ 0.59
EMP3-205ENST00000597057 TIAM1Q13009 1591 aa18.73■□□□□ 0.59
EMP3-205ENST00000597057 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.73■□□□□ 0.59
EMP3-205ENST00000597057 CFAP43Q8NDM7 1665 aa18.73■□□□□ 0.59
EMP3-205ENST00000597057 CD109Q6YHK3 1445 aa18.72■□□□□ 0.59
EMP3-205ENST00000597057 KIF14Q15058 1648 aa18.71■□□□□ 0.59
EMP3-205ENST00000597057 MAP3K1Q13233 1512 aa18.71■□□□□ 0.59
EMP3-205ENST00000597057 TTC37Q6PGP7 1564 aa18.7■□□□□ 0.58
EMP3-205ENST00000597057 PPRC1Q5VV67 1664 aaKnown RBP18.69■□□□□ 0.58
EMP3-205ENST00000597057 MTUS2Q5JR59 1369 aa18.69■□□□□ 0.58
EMP3-205ENST00000597057 TSPOAP1O95153 1857 aa18.69■□□□□ 0.58
EMP3-205ENST00000597057 KANK4Q5T7N3 995 aaPredicted RBP18.67■□□□□ 0.58
EMP3-205ENST00000597057 LRRC9Q6ZRR7 1453 aa18.66■□□□□ 0.58
EMP3-205ENST00000597057 EHBP1L1Q8N3D4 1523 aa18.66■□□□□ 0.58
EMP3-205ENST00000597057 APLP2Q06481 763 aa18.65■□□□□ 0.58
EMP3-205ENST00000597057 TEX14Q8IWB6 1497 aa18.63■□□□□ 0.57
EMP3-205ENST00000597057 PLCH2O75038 1416 aa18.62■□□□□ 0.57
EMP3-205ENST00000597057 KDM4FA0A1W2PPD8 638 aa18.61■□□□□ 0.57
EMP3-205ENST00000597057 NCOA2Q15596 1464 aa18.58■□□□□ 0.56
EMP3-205ENST00000597057 MYO5CQ9NQX4 1742 aa18.57■□□□□ 0.56
EMP3-205ENST00000597057 ARAP3Q8WWN8 1544 aa18.57■□□□□ 0.56
EMP3-205ENST00000597057 GPATCH8Q9UKJ3 1502 aaKnown RBP18.57■□□□□ 0.56
EMP3-205ENST00000597057 FANCAO15360 1455 aa18.57■□□□□ 0.56
EMP3-205ENST00000597057 NEO1Q92859 1461 aa18.57■□□□□ 0.56
EMP3-205ENST00000597057 SUPT6HQ7KZ85 1726 aaKnown RBP18.57■□□□□ 0.56
EMP3-205ENST00000597057 CCNB3Q8WWL7 1395 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms