RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 KIAA0586Q9BVV6 1533 aa22.61■■□□□ 1.21
LIG1-212ENST00000596549 CARMIL1Q5VZK9 1371 aa22.57■■□□□ 1.2
LIG1-212ENST00000596549 JPH4Q96JJ6 628 aa22.55■■□□□ 1.2
LIG1-212ENST00000596549 IQGAP2Q13576 1575 aa22.53■■□□□ 1.2
LIG1-212ENST00000596549 TRHP20396 242 aaPredicted RBP22.52■■□□□ 1.2
LIG1-212ENST00000596549 ADCY10Q96PN6 1610 aa22.5■■□□□ 1.19
LIG1-212ENST00000596549 KIF13AQ9H1H9 1805 aa22.49■■□□□ 1.19
LIG1-212ENST00000596549 CTTNBP2Q8WZ74 1663 aa22.49■■□□□ 1.19
LIG1-212ENST00000596549 RAPGEF2Q9Y4G8 1499 aa22.46■■□□□ 1.19
LIG1-212ENST00000596549 MAPKBP1O60336 1514 aa22.37■■□□□ 1.17
LIG1-212ENST00000596549 DISP1Q96F81 1524 aa22.37■■□□□ 1.17
LIG1-212ENST00000596549 UGGT2Q9NYU1 1516 aa22.36■■□□□ 1.17
LIG1-212ENST00000596549 KIAA0556O60303 1618 aa22.35■■□□□ 1.17
LIG1-212ENST00000596549 PRXQ9BXM0 1461 aa22.34■■□□□ 1.17
LIG1-212ENST00000596549 DIP2BQ9P265 1576 aa22.33■■□□□ 1.16
LIG1-212ENST00000596549 CARMIL2Q6F5E8 1435 aa22.31■■□□□ 1.16
LIG1-212ENST00000596549 TNIKQ9UKE5 1360 aa22.28■■□□□ 1.16
LIG1-212ENST00000596549 PTPRGP23470 1445 aa22.26■■□□□ 1.15
LIG1-212ENST00000596549 ABCC10Q5T3U5 1492 aa22.25■■□□□ 1.15
LIG1-212ENST00000596549 ABCC2Q92887 1545 aa22.22■■□□□ 1.15
LIG1-212ENST00000596549 UHRF1BP1LA0JNW5 1464 aa22.21■■□□□ 1.15
LIG1-212ENST00000596549 ZCCHC11Q5TAX3 1644 aaKnown RBP22.18■■□□□ 1.14
LIG1-212ENST00000596549 TTBK1Q5TCY1 1321 aaPredicted RBP22.17■■□□□ 1.14
LIG1-212ENST00000596549 UACAQ9BZF9 1416 aa22.16■■□□□ 1.14
LIG1-212ENST00000596549 TSPOAP1O95153 1857 aa22.15■■□□□ 1.14
LIG1-212ENST00000596549 EEA1Q15075 1411 aa22.14■■□□□ 1.13
LIG1-212ENST00000596549 NPM1P06748 294 aaKnown RBP eCLIP22.13■■□□□ 1.13
LIG1-212ENST00000596549 KDM5BQ9UGL1 1544 aa22.12■■□□□ 1.13
LIG1-212ENST00000596549 GOLGA3Q08378 1498 aa22.12■■□□□ 1.13
LIG1-212ENST00000596549 ABCA8O94911 1581 aa22.11■■□□□ 1.13
LIG1-212ENST00000596549 SAMD9Q5K651 1589 aa22.11■■□□□ 1.13
LIG1-212ENST00000596549 PPRC1Q5VV67 1664 aaKnown RBP22.11■■□□□ 1.13
LIG1-212ENST00000596549 KIF21BO75037 1637 aa22.09■■□□□ 1.13
LIG1-212ENST00000596549 PLB1Q6P1J6 1458 aa22.09■■□□□ 1.13
LIG1-212ENST00000596549 ASXL2Q76L83 1435 aa22.08■■□□□ 1.13
LIG1-212ENST00000596549 FAM69CQ0P6D2 419 aa22.07■■□□□ 1.12
LIG1-212ENST00000596549 CSRNP3Q8WYN3 585 aa22.07■■□□□ 1.12
LIG1-212ENST00000596549 GLI2P10070 1586 aa22.07■■□□□ 1.12
LIG1-212ENST00000596549 MAP3K4Q9Y6R4 1608 aa22.03■■□□□ 1.12
LIG1-212ENST00000596549 KDM6BO15054 1643 aa22.02■■□□□ 1.11
LIG1-212ENST00000596549 EPRSP07814 1512 aaKnown RBP21.99■■□□□ 1.11
LIG1-212ENST00000596549 WDR7Q9Y4E6 1490 aa21.95■■□□□ 1.1
LIG1-212ENST00000596549 RAPGEF6Q8TEU7 1601 aa21.94■■□□□ 1.1
LIG1-212ENST00000596549 CHIC1Q5VXU3 224 aa21.93■■□□□ 1.1
LIG1-212ENST00000596549 FAM9AQ8IZU1 332 aaPredicted RBP21.93■■□□□ 1.1
LIG1-212ENST00000596549 CFAP43Q8NDM7 1665 aa21.9■■□□□ 1.1
LIG1-212ENST00000596549 EFCAB5A4FU69 1503 aa21.88■■□□□ 1.09
LIG1-212ENST00000596549 P3H3Q8IVL6 736 aa21.86■■□□□ 1.09
LIG1-212ENST00000596549 FHOD3Q2V2M9 1422 aa21.85■■□□□ 1.09
LIG1-212ENST00000596549 ATP10BO94823 1461 aa21.82■■□□□ 1.08
LIG1-212ENST00000596549 NUP153P49790 1475 aaKnown RBP21.8■■□□□ 1.08
LIG1-212ENST00000596549 TEX14Q8IWB6 1497 aa21.79■■□□□ 1.08
LIG1-212ENST00000596549 AEBP2Q6ZN18 517 aaPredicted RBP21.78■■□□□ 1.08
LIG1-212ENST00000596549 ABCA9Q8IUA7 1624 aa21.77■■□□□ 1.08
LIG1-212ENST00000596549 COL17A1Q9UMD9 1497 aaPredicted RBP21.77■■□□□ 1.07
LIG1-212ENST00000596549 MAGI3Q5TCQ9 1506 aa21.75■■□□□ 1.07
LIG1-212ENST00000596549 RANGAP1P46060 587 aaPredicted RBP21.74■■□□□ 1.07
LIG1-212ENST00000596549 ARID3CA6NKF2 412 aa21.73■■□□□ 1.07
LIG1-212ENST00000596549 ARHGAP35Q9NRY4 1499 aa21.71■■□□□ 1.07
LIG1-212ENST00000596549 CD109Q6YHK3 1445 aa21.7■■□□□ 1.06
LIG1-212ENST00000596549 EHMT2Q96KQ7 1210 aa21.68■■□□□ 1.06
LIG1-212ENST00000596549 LRRIQ1Q96JM4 1722 aa21.68■■□□□ 1.06
LIG1-212ENST00000596549 CDK13Q14004 1512 aaKnown RBP21.65■■□□□ 1.06
LIG1-212ENST00000596549 KCNH8Q96L42 1107 aa21.65■■□□□ 1.06
LIG1-212ENST00000596549 HECW1Q76N89 1606 aa21.65■■□□□ 1.06
LIG1-212ENST00000596549 UBTFP17480 764 aaKnown RBP21.61■■□□□ 1.05
LIG1-212ENST00000596549 TTC37Q6PGP7 1564 aa21.61■■□□□ 1.05
LIG1-212ENST00000596549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.58■■□□□ 1.04
LIG1-212ENST00000596549 FMN1Q68DA7 1419 aa21.57■■□□□ 1.04
LIG1-212ENST00000596549 FRMPD1Q5SYB0 1578 aa21.57■■□□□ 1.04
LIG1-212ENST00000596549 ARAP3Q8WWN8 1544 aa21.56■■□□□ 1.04
LIG1-212ENST00000596549 PCF11O94913 1555 aaKnown RBP21.56■■□□□ 1.04
LIG1-212ENST00000596549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.53■■□□□ 1.04
LIG1-212ENST00000596549 HNRNPUL2Q1KMD3 747 aaKnown RBP21.53■■□□□ 1.04
LIG1-212ENST00000596549 CFAP74Q9C0B2 1584 aa21.53■■□□□ 1.04
LIG1-212ENST00000596549 ADGRL1O94910 1474 aa21.52■■□□□ 1.03
LIG1-212ENST00000596549 NEO1Q92859 1461 aa21.52■■□□□ 1.03
LIG1-212ENST00000596549 KDM4FA0A1W2PPD8 638 aa21.51■■□□□ 1.03
LIG1-212ENST00000596549 RICTORQ6R327 1708 aa21.5■■□□□ 1.03
LIG1-212ENST00000596549 KIF14Q15058 1648 aa21.5■■□□□ 1.03
LIG1-212ENST00000596549 MYO5CQ9NQX4 1742 aa21.49■■□□□ 1.03
LIG1-212ENST00000596549 PLEKHD1A6NEE1 506 aa21.44■■□□□ 1.02
LIG1-212ENST00000596549 PHLDB1Q86UU1 1377 aa21.43■■□□□ 1.02
LIG1-212ENST00000596549 FANCAO15360 1455 aa21.42■■□□□ 1.02
LIG1-212ENST00000596549 ARHGEF40Q8TER5 1519 aa21.39■■□□□ 1.02
LIG1-212ENST00000596549 CASKIN1Q8WXD9 1431 aa21.39■■□□□ 1.02
LIG1-212ENST00000596549 FYCO1Q9BQS8 1478 aa21.39■■□□□ 1.01
LIG1-212ENST00000596549 CLIP1P30622 1438 aa21.38■■□□□ 1.01
LIG1-212ENST00000596549 CCDC18Q5T9S5 1454 aa21.38■■□□□ 1.01
LIG1-212ENST00000596549 TROQ12816 1431 aaPredicted RBP21.38■■□□□ 1.01
LIG1-212ENST00000596549 ZMYM4Q5VZL5 1548 aa21.37■■□□□ 1.01
LIG1-212ENST00000596549 AKNAQ7Z591 1439 aa21.37■■□□□ 1.01
LIG1-212ENST00000596549 CDC42BPBQ9Y5S2 1711 aa21.36■■□□□ 1.01
LIG1-212ENST00000596549 PREX2Q70Z35 1606 aa21.35■■□□□ 1.01
LIG1-212ENST00000596549 SIGLEC1Q9BZZ2 1709 aa21.35■■□□□ 1.01
LIG1-212ENST00000596549 ATP1B4Q9UN42 357 aaPredicted RBP21.34■■□□□ 1.01
LIG1-212ENST00000596549 DENND4BO75064 1496 aaPredicted RBP21.33■■□□□ 1.01
LIG1-212ENST00000596549 PLCH2O75038 1416 aa21.33■■□□□ 1.01
LIG1-212ENST00000596549 RAPGEF3O95398 923 aa21.33■■□□□ 1.01
LIG1-212ENST00000596549 CDC42BPAQ5VT25 1732 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms