RNA–Protein interactions for RNA: ENST00000596496.1

CCDC94-202, Transcript of Coiled-coil domain-containing protein 94, humanhuman

TSL 3

Gene CCDC94, Length 800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94-202ENST00000596496 NUP160Q12769 1436 aa17.11■□□□□ 0.33
CCDC94-202ENST00000596496 CEP170Q5SW79 1584 aa17.11■□□□□ 0.33
CCDC94-202ENST00000596496 LOC105371045A0A1W2PR82 267 aa17.08■□□□□ 0.32
CCDC94-202ENST00000596496 CARMIL1Q5VZK9 1371 aa17.07■□□□□ 0.32
CCDC94-202ENST00000596496 SHROOM2Q13796 1616 aa17.05■□□□□ 0.32
CCDC94-202ENST00000596496 RAPGEF2Q9Y4G8 1499 aa17.05■□□□□ 0.32
CCDC94-202ENST00000596496 GOLGA3Q08378 1498 aa17■□□□□ 0.31
CCDC94-202ENST00000596496 ERCC6L2Q5T890 1561 aa17■□□□□ 0.31
CCDC94-202ENST00000596496 CYB5RLQ6IPT4 315 aa16.99■□□□□ 0.31
CCDC94-202ENST00000596496 TNIKQ9UKE5 1360 aa16.93■□□□□ 0.3
CCDC94-202ENST00000596496 CTTNBP2Q8WZ74 1663 aa16.91■□□□□ 0.3
CCDC94-202ENST00000596496 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
CCDC94-202ENST00000596496 KIAA0586Q9BVV6 1533 aa16.86■□□□□ 0.29
CCDC94-202ENST00000596496 UBTFP17480 764 aaKnown RBP16.85■□□□□ 0.29
CCDC94-202ENST00000596496 PRG4Q92954 1404 aaPredicted RBP16.83■□□□□ 0.28
CCDC94-202ENST00000596496 JPH4Q96JJ6 628 aa16.83■□□□□ 0.28
CCDC94-202ENST00000596496 CEP162Q5TB80 1403 aa16.77■□□□□ 0.27
CCDC94-202ENST00000596496 IQGAP2Q13576 1575 aa16.76■□□□□ 0.27
CCDC94-202ENST00000596496 UGGT2Q9NYU1 1516 aa16.72■□□□□ 0.27
CCDC94-202ENST00000596496 SAMD9Q5K651 1589 aa16.72■□□□□ 0.27
CCDC94-202ENST00000596496 ARHGAP35Q9NRY4 1499 aa16.71■□□□□ 0.27
CCDC94-202ENST00000596496 ADCY10Q96PN6 1610 aa16.7■□□□□ 0.26
CCDC94-202ENST00000596496 CLIP1P30622 1438 aa16.7■□□□□ 0.26
CCDC94-202ENST00000596496 DISP1Q96F81 1524 aa16.68■□□□□ 0.26
CCDC94-202ENST00000596496 EFCAB5A4FU69 1503 aa16.66■□□□□ 0.26
CCDC94-202ENST00000596496 KIF13AQ9H1H9 1805 aa16.66■□□□□ 0.26
CCDC94-202ENST00000596496 TRHP20396 242 aaPredicted RBP16.62■□□□□ 0.25
CCDC94-202ENST00000596496 KIAA0556O60303 1618 aa16.62■□□□□ 0.25
CCDC94-202ENST00000596496 MAPKBP1O60336 1514 aa16.61■□□□□ 0.25
CCDC94-202ENST00000596496 RANGAP1P46060 587 aaPredicted RBP16.61■□□□□ 0.25
CCDC94-202ENST00000596496 CARMIL2Q6F5E8 1435 aa16.61■□□□□ 0.25
CCDC94-202ENST00000596496 PTPRGP23470 1445 aa16.59■□□□□ 0.25
CCDC94-202ENST00000596496 FHOD3Q2V2M9 1422 aa16.56■□□□□ 0.24
CCDC94-202ENST00000596496 UHRF1BP1LA0JNW5 1464 aa16.55■□□□□ 0.24
CCDC94-202ENST00000596496 P3H3Q8IVL6 736 aa16.55■□□□□ 0.24
CCDC94-202ENST00000596496 VPS8Q8N3P4 1428 aa16.53■□□□□ 0.24
CCDC94-202ENST00000596496 DIP2BQ9P265 1576 aa16.53■□□□□ 0.24
CCDC94-202ENST00000596496 ABCC2Q92887 1545 aa16.52■□□□□ 0.24
CCDC94-202ENST00000596496 ABCC10Q5T3U5 1492 aa16.52■□□□□ 0.23
CCDC94-202ENST00000596496 UACAQ9BZF9 1416 aa16.51■□□□□ 0.23
CCDC94-202ENST00000596496 LRRIQ1Q96JM4 1722 aa16.5■□□□□ 0.23
CCDC94-202ENST00000596496 KDM5BQ9UGL1 1544 aa16.48■□□□□ 0.23
CCDC94-202ENST00000596496 ABCA8O94911 1581 aa16.47■□□□□ 0.23
CCDC94-202ENST00000596496 FMN1Q68DA7 1419 aa16.46■□□□□ 0.23
CCDC94-202ENST00000596496 ZCCHC11Q5TAX3 1644 aaKnown RBP16.46■□□□□ 0.23
CCDC94-202ENST00000596496 PCF11O94913 1555 aaKnown RBP16.46■□□□□ 0.23
CCDC94-202ENST00000596496 NPM1P06748 294 aaKnown RBP eCLIP16.45■□□□□ 0.22
CCDC94-202ENST00000596496 CASKIN1Q8WXD9 1431 aa16.44■□□□□ 0.22
CCDC94-202ENST00000596496 PLB1Q6P1J6 1458 aa16.43■□□□□ 0.22
CCDC94-202ENST00000596496 TTBK1Q5TCY1 1321 aaPredicted RBP16.43■□□□□ 0.22
CCDC94-202ENST00000596496 RAPGEF6Q8TEU7 1601 aa16.42■□□□□ 0.22
CCDC94-202ENST00000596496 GLI2P10070 1586 aa16.42■□□□□ 0.22
CCDC94-202ENST00000596496 ASXL2Q76L83 1435 aa16.41■□□□□ 0.22
CCDC94-202ENST00000596496 FYCO1Q9BQS8 1478 aa16.41■□□□□ 0.22
CCDC94-202ENST00000596496 PPRC1Q5VV67 1664 aaKnown RBP16.4■□□□□ 0.22
CCDC94-202ENST00000596496 TSPOAP1O95153 1857 aa16.39■□□□□ 0.22
CCDC94-202ENST00000596496 FAM69CQ0P6D2 419 aa16.39■□□□□ 0.21
CCDC94-202ENST00000596496 MAP3K1Q13233 1512 aa16.39■□□□□ 0.21
CCDC94-202ENST00000596496 CFAP43Q8NDM7 1665 aa16.37■□□□□ 0.21
CCDC94-202ENST00000596496 HECW1Q76N89 1606 aa16.36■□□□□ 0.21
CCDC94-202ENST00000596496 NUP153P49790 1475 aaKnown RBP16.35■□□□□ 0.21
CCDC94-202ENST00000596496 MAP3K4Q9Y6R4 1608 aa16.35■□□□□ 0.21
CCDC94-202ENST00000596496 EPRSP07814 1512 aaKnown RBP16.35■□□□□ 0.21
CCDC94-202ENST00000596496 TIAM1Q13009 1591 aa16.34■□□□□ 0.21
CCDC94-202ENST00000596496 WDR7Q9Y4E6 1490 aa16.31■□□□□ 0.2
CCDC94-202ENST00000596496 ATP10BO94823 1461 aa16.29■□□□□ 0.2
CCDC94-202ENST00000596496 KANK4Q5T7N3 995 aaPredicted RBP16.28■□□□□ 0.2
CCDC94-202ENST00000596496 CDK13Q14004 1512 aaKnown RBP16.28■□□□□ 0.2
CCDC94-202ENST00000596496 CCDC18Q5T9S5 1454 aa16.28■□□□□ 0.2
CCDC94-202ENST00000596496 MAGI3Q5TCQ9 1506 aa16.27■□□□□ 0.2
CCDC94-202ENST00000596496 KDM6BO15054 1643 aa16.27■□□□□ 0.19
CCDC94-202ENST00000596496 LRRC9Q6ZRR7 1453 aa16.25■□□□□ 0.19
CCDC94-202ENST00000596496 ATP1B4Q9UN42 357 aaPredicted RBP16.24■□□□□ 0.19
CCDC94-202ENST00000596496 APLP2Q06481 763 aa16.21■□□□□ 0.19
CCDC94-202ENST00000596496 PPARGC1BQ86YN6 1023 aaKnown RBP16.21■□□□□ 0.19
CCDC94-202ENST00000596496 COL17A1Q9UMD9 1497 aaPredicted RBP16.19■□□□□ 0.18
CCDC94-202ENST00000596496 ABCA9Q8IUA7 1624 aa16.19■□□□□ 0.18
CCDC94-202ENST00000596496 TEX14Q8IWB6 1497 aa16.17■□□□□ 0.18
CCDC94-202ENST00000596496 ARID3CA6NKF2 412 aa16.17■□□□□ 0.18
CCDC94-202ENST00000596496 EHBP1L1Q8N3D4 1523 aa16.17■□□□□ 0.18
CCDC94-202ENST00000596496 SUPT6HQ7KZ85 1726 aaKnown RBP16.15■□□□□ 0.18
CCDC94-202ENST00000596496 TROQ12816 1431 aaPredicted RBP16.14■□□□□ 0.17
CCDC94-202ENST00000596496 CD109Q6YHK3 1445 aa16.14■□□□□ 0.17
CCDC94-202ENST00000596496 KIF14Q15058 1648 aa16.12■□□□□ 0.17
CCDC94-202ENST00000596496 MTUS2Q5JR59 1369 aa16.12■□□□□ 0.17
CCDC94-202ENST00000596496 KCNH8Q96L42 1107 aa16.11■□□□□ 0.17
CCDC94-202ENST00000596496 PLEKHD1A6NEE1 506 aa16.1■□□□□ 0.17
CCDC94-202ENST00000596496 CDK11AQ9UQ88 783 aaPredicted RBP16.1■□□□□ 0.17
CCDC94-202ENST00000596496 NCOA2Q15596 1464 aa16.09■□□□□ 0.17
CCDC94-202ENST00000596496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.16
CCDC94-202ENST00000596496 HNRNPUL2Q1KMD3 747 aaKnown RBP16.08■□□□□ 0.16
CCDC94-202ENST00000596496 PHLDB1Q86UU1 1377 aa16.07■□□□□ 0.16
CCDC94-202ENST00000596496 CDC42BPAQ5VT25 1732 aa16.07■□□□□ 0.16
CCDC94-202ENST00000596496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.06■□□□□ 0.16
CCDC94-202ENST00000596496 TTC37Q6PGP7 1564 aa16.05■□□□□ 0.16
CCDC94-202ENST00000596496 ARAP3Q8WWN8 1544 aa16.05■□□□□ 0.16
CCDC94-202ENST00000596496 CDC42BPBQ9Y5S2 1711 aa16.04■□□□□ 0.16
CCDC94-202ENST00000596496 RRBP1Q9P2E9 1410 aaKnown RBP16.03■□□□□ 0.16
CCDC94-202ENST00000596496 NEO1Q92859 1461 aa16.02■□□□□ 0.15
CCDC94-202ENST00000596496 FRMPD1Q5SYB0 1578 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms