RNA–Protein interactions for RNA: ENST00000596411.1

SPTBN4-209, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 1,885 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-209ENST00000596411 DNAJC5BQ9UF47 199 aa34.26■■■■□ 3.07
SPTBN4-209ENST00000596411 ABCA5Q8WWZ7 1642 aa34.24■■■■□ 3.07
SPTBN4-209ENST00000596411 ZNF316A6NFI3 1004 aaPredicted RBP34.24■■■■□ 3.07
SPTBN4-209ENST00000596411 PDS5BQ9NTI5 1447 aa34.24■■■■□ 3.07
SPTBN4-209ENST00000596411 AQRO60306 1485 aaKnown RBP eCLIP34.2■■■■□ 3.07
SPTBN4-209ENST00000596411 LRRC9Q6ZRR7 1453 aa34.19■■■■□ 3.06
SPTBN4-209ENST00000596411 DHX57Q6P158 1386 aaKnown RBP34.18■■■■□ 3.06
SPTBN4-209ENST00000596411 PCF11O94913 1555 aaKnown RBP34.17■■■■□ 3.06
SPTBN4-209ENST00000596411 FYCO1Q9BQS8 1478 aa34.15■■■■□ 3.06
SPTBN4-209ENST00000596411 CASKIN1Q8WXD9 1431 aa34.07■■■■□ 3.04
SPTBN4-209ENST00000596411 KIF21AQ7Z4S6 1674 aa34.05■■■■□ 3.04
SPTBN4-209ENST00000596411 GAPVD1Q14C86 1478 aa34.02■■■■□ 3.04
SPTBN4-209ENST00000596411 SAMD9Q5K651 1589 aa34■■■■□ 3.03
SPTBN4-209ENST00000596411 TARBP1Q13395 1621 aaKnown RBP33.98■■■■□ 3.03
SPTBN4-209ENST00000596411 FHOD3Q2V2M9 1422 aa33.98■■■■□ 3.03
SPTBN4-209ENST00000596411 FMN1Q68DA7 1419 aa33.97■■■■□ 3.03
SPTBN4-209ENST00000596411 PHLDB1Q86UU1 1377 aa33.92■■■■□ 3.02
SPTBN4-209ENST00000596411 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.92■■■■□ 3.02
SPTBN4-209ENST00000596411 SNAPC4Q5SXM2 1469 aa33.9■■■■□ 3.02
SPTBN4-209ENST00000596411 THOC2Q8NI27 1593 aaKnown RBP33.88■■■■□ 3.01
SPTBN4-209ENST00000596411 TDRD9Q8NDG6 1382 aaKnown RBP33.87■■■■□ 3.01
SPTBN4-209ENST00000596411 RAB3GAP2Q9H2M9 1393 aa33.8■■■■□ 3
SPTBN4-209ENST00000596411 SCAF1Q9H7N4 1312 aaKnown RBP33.8■■■■□ 3
SPTBN4-209ENST00000596411 ACIN1Q9UKV3 1341 aaKnown RBP33.8■■■■□ 3
SPTBN4-209ENST00000596411 SETD5Q9C0A6 1442 aa33.79■■■■□ 3
SPTBN4-209ENST00000596411 PBRM1Q86U86 1689 aa33.78■■■■□ 3
SPTBN4-209ENST00000596411 P3H3Q8IVL6 736 aa33.76■■■□□ 2.99
SPTBN4-209ENST00000596411 MRC2Q9UBG0 1479 aa33.75■■■□□ 2.99
SPTBN4-209ENST00000596411 CENPBP07199 599 aaPredicted RBP33.75■■■□□ 2.99
SPTBN4-209ENST00000596411 GRIN2BQ13224 1484 aa33.73■■■□□ 2.99
SPTBN4-209ENST00000596411 MAPKBP1O60336 1514 aa33.72■■■□□ 2.99
SPTBN4-209ENST00000596411 ADAMTS12P58397 1594 aa33.69■■■□□ 2.98
SPTBN4-209ENST00000596411 LRRIQ1Q96JM4 1722 aa33.67■■■□□ 2.98
SPTBN4-209ENST00000596411 FGD6Q6ZV73 1430 aa33.62■■■□□ 2.97
SPTBN4-209ENST00000596411 NEUROD1Q13562 356 aa33.62■■■□□ 2.97
SPTBN4-209ENST00000596411 EHBP1L1Q8N3D4 1523 aa33.61■■■□□ 2.97
SPTBN4-209ENST00000596411 ITGAEP38570 1179 aa33.59■■■□□ 2.97
SPTBN4-209ENST00000596411 CCDC18Q5T9S5 1454 aa33.57■■■□□ 2.97
SPTBN4-209ENST00000596411 IQGAP2Q13576 1575 aa33.57■■■□□ 2.97
SPTBN4-209ENST00000596411 WDR62O43379 1518 aa33.57■■■□□ 2.96
SPTBN4-209ENST00000596411 SUPT6HQ7KZ85 1726 aaKnown RBP33.55■■■□□ 2.96
SPTBN4-209ENST00000596411 IFT140Q96RY7 1462 aa33.55■■■□□ 2.96
SPTBN4-209ENST00000596411 MTUS2Q5JR59 1369 aa33.55■■■□□ 2.96
SPTBN4-209ENST00000596411 FAM50AQ14320 339 aaKnown RBP33.54■■■□□ 2.96
SPTBN4-209ENST00000596411 ATP1B4Q9UN42 357 aaPredicted RBP33.54■■■□□ 2.96
SPTBN4-209ENST00000596411 ARHGEF11O15085 1522 aa33.53■■■□□ 2.96
SPTBN4-209ENST00000596411 HECW1Q76N89 1606 aa33.5■■■□□ 2.95
SPTBN4-209ENST00000596411 MIER1Q8N108 512 aa33.5■■■□□ 2.95
SPTBN4-209ENST00000596411 NCOA2Q15596 1464 aa33.49■■■□□ 2.95
SPTBN4-209ENST00000596411 MYOM3Q5VTT5 1437 aa33.48■■■□□ 2.95
SPTBN4-209ENST00000596411 UGGT2Q9NYU1 1516 aa33.47■■■□□ 2.95
SPTBN4-209ENST00000596411 TIMELESSQ9UNS1 1208 aa33.44■■■□□ 2.94
SPTBN4-209ENST00000596411 HFM1A2PYH4 1435 aa33.4■■■□□ 2.94
SPTBN4-209ENST00000596411 MAGI3Q5TCQ9 1506 aa33.36■■■□□ 2.93
SPTBN4-209ENST00000596411 TCOF1Q13428 1488 aaKnown RBP33.35■■■□□ 2.93
SPTBN4-209ENST00000596411 PTPN23Q9H3S7 1636 aa33.34■■■□□ 2.93
SPTBN4-209ENST00000596411 EPRSP07814 1512 aaKnown RBP33.31■■■□□ 2.92
SPTBN4-209ENST00000596411 KIAA0586Q9BVV6 1533 aa33.3■■■□□ 2.92
SPTBN4-209ENST00000596411 ZNF608Q9ULD9 1512 aaPredicted RBP33.29■■■□□ 2.92
SPTBN4-209ENST00000596411 PTPRKQ15262 1439 aa33.29■■■□□ 2.92
SPTBN4-209ENST00000596411 UACAQ9BZF9 1416 aa33.27■■■□□ 2.92
SPTBN4-209ENST00000596411 EIF4G3O43432 1585 aaKnown RBP33.25■■■□□ 2.91
SPTBN4-209ENST00000596411 AKNAQ7Z591 1439 aa33.24■■■□□ 2.91
SPTBN4-209ENST00000596411 KIAA0556O60303 1618 aa33.23■■■□□ 2.91
SPTBN4-209ENST00000596411 NAIPQ13075 1403 aa33.23■■■□□ 2.91
SPTBN4-209ENST00000596411 MIA2Q96PC5 1412 aa33.22■■■□□ 2.91
SPTBN4-209ENST00000596411 GTF3C3Q9Y5Q9 886 aa33.21■■■□□ 2.91
SPTBN4-209ENST00000596411 GRIN2AQ12879 1464 aa33.19■■■□□ 2.9
SPTBN4-209ENST00000596411 GCC2Q8IWJ2 1684 aa33.19■■■□□ 2.9
SPTBN4-209ENST00000596411 MAGI1Q96QZ7 1491 aaPredicted RBP33.17■■■□□ 2.9
SPTBN4-209ENST00000596411 DISP1Q96F81 1524 aa33.17■■■□□ 2.9
SPTBN4-209ENST00000596411 CDK13Q14004 1512 aaKnown RBP33.12■■■□□ 2.89
SPTBN4-209ENST00000596411 SIN3AQ96ST3 1273 aa33.1■■■□□ 2.89
SPTBN4-209ENST00000596411 PELP1Q8IZL8 1130 aaKnown RBP33.07■■■□□ 2.88
SPTBN4-209ENST00000596411 RAPGEF6Q8TEU7 1601 aa33.06■■■□□ 2.88
SPTBN4-209ENST00000596411 YTHDC1Q96MU7 727 aaKnown RBP33.06■■■□□ 2.88
SPTBN4-209ENST00000596411 PPP1R15AO75807 674 aaPredicted RBP33.03■■■□□ 2.88
SPTBN4-209ENST00000596411 ERCC6Q03468 1493 aa33.03■■■□□ 2.88
SPTBN4-209ENST00000596411 SYNJ2O15056 1496 aa33.02■■■□□ 2.88
SPTBN4-209ENST00000596411 NUP153P49790 1475 aaKnown RBP33.01■■■□□ 2.88
SPTBN4-209ENST00000596411 CEP170Q5SW79 1584 aa32.95■■■□□ 2.87
SPTBN4-209ENST00000596411 TONSLQ96HA7 1378 aa32.93■■■□□ 2.86
SPTBN4-209ENST00000596411 NUP160Q12769 1436 aa32.92■■■□□ 2.86
SPTBN4-209ENST00000596411 ROCK1Q13464 1354 aa32.91■■■□□ 2.86
SPTBN4-209ENST00000596411 DNMT1P26358 1616 aaKnown RBP32.91■■■□□ 2.86
SPTBN4-209ENST00000596411 KDM5BQ9UGL1 1544 aa32.87■■■□□ 2.85
SPTBN4-209ENST00000596411 ADCY10Q96PN6 1610 aa32.86■■■□□ 2.85
SPTBN4-209ENST00000596411 DENND4BO75064 1496 aaPredicted RBP32.83■■■□□ 2.85
SPTBN4-209ENST00000596411 DAPK1P53355 1430 aa32.83■■■□□ 2.85
SPTBN4-209ENST00000596411 CDK11AQ9UQ88 783 aaPredicted RBP32.83■■■□□ 2.85
SPTBN4-209ENST00000596411 TROQ12816 1431 aaPredicted RBP32.82■■■□□ 2.84
SPTBN4-209ENST00000596411 ITSN2Q9NZM3 1697 aa32.81■■■□□ 2.84
SPTBN4-209ENST00000596411 KDM6BO15054 1643 aa32.8■■■□□ 2.84
SPTBN4-209ENST00000596411 CARMIL2Q6F5E8 1435 aa32.78■■■□□ 2.84
SPTBN4-209ENST00000596411 CHMP7Q8WUX9 453 aaPredicted RBP32.76■■■□□ 2.83
SPTBN4-209ENST00000596411 ABCC5O15440 1437 aa32.75■■■□□ 2.83
SPTBN4-209ENST00000596411 RRP7BPQ9NSQ0 103 aa32.74■■■□□ 2.83
SPTBN4-209ENST00000596411 PLB1Q6P1J6 1458 aa32.68■■■□□ 2.82
SPTBN4-209ENST00000596411 CHIC2Q9UKJ5 165 aa32.67■■■□□ 2.82
SPTBN4-209ENST00000596411 ABCA8O94911 1581 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms