RNA–Protein interactions for RNA: ENST00000595689.2

SSX4-201, Transcript of SSX family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4-201ENST00000595689 MSH5O43196 834 aa10.24□□□□□ -0.77
SSX4-201ENST00000595689 NUP160Q12769 1436 aa10.24□□□□□ -0.77
SSX4-201ENST00000595689 CYB5RLQ6IPT4 315 aa10.22□□□□□ -0.77
SSX4-201ENST00000595689 ERCC6L2Q5T890 1561 aa10.21□□□□□ -0.78
SSX4-201ENST00000595689 SHROOM2Q13796 1616 aa10.21□□□□□ -0.78
SSX4-201ENST00000595689 CUL7Q14999 1698 aa10.18□□□□□ -0.78
SSX4-201ENST00000595689 RUSC2Q8N2Y8 1516 aa10.18□□□□□ -0.78
SSX4-201ENST00000595689 KIF27Q86VH2 1401 aa10.17□□□□□ -0.78
SSX4-201ENST00000595689 IGF1RP08069 1367 aa10.15□□□□□ -0.78
SSX4-201ENST00000595689 PRG4Q92954 1404 aaPredicted RBP10.1□□□□□ -0.79
SSX4-201ENST00000595689 CARMIL1Q5VZK9 1371 aa10.09□□□□□ -0.79
SSX4-201ENST00000595689 KIAA0586Q9BVV6 1533 aa10.08□□□□□ -0.8
SSX4-201ENST00000595689 JPH4Q96JJ6 628 aa10.08□□□□□ -0.8
SSX4-201ENST00000595689 TRHP20396 242 aaPredicted RBP10.05□□□□□ -0.8
SSX4-201ENST00000595689 IQGAP2Q13576 1575 aa10.04□□□□□ -0.8
SSX4-201ENST00000595689 RAPGEF2Q9Y4G8 1499 aa10.04□□□□□ -0.8
SSX4-201ENST00000595689 ADCY10Q96PN6 1610 aa10.02□□□□□ -0.81
SSX4-201ENST00000595689 CTTNBP2Q8WZ74 1663 aa10.02□□□□□ -0.81
SSX4-201ENST00000595689 KIF13AQ9H1H9 1805 aa9.99□□□□□ -0.81
SSX4-201ENST00000595689 DISP1Q96F81 1524 aa9.98□□□□□ -0.81
SSX4-201ENST00000595689 PRXQ9BXM0 1461 aa9.98□□□□□ -0.81
SSX4-201ENST00000595689 UGGT2Q9NYU1 1516 aa9.97□□□□□ -0.81
SSX4-201ENST00000595689 KIAA0556O60303 1618 aa9.96□□□□□ -0.81
SSX4-201ENST00000595689 MAPKBP1O60336 1514 aa9.96□□□□□ -0.82
SSX4-201ENST00000595689 TNIKQ9UKE5 1360 aa9.95□□□□□ -0.82
SSX4-201ENST00000595689 CARMIL2Q6F5E8 1435 aa9.95□□□□□ -0.82
SSX4-201ENST00000595689 PTPRGP23470 1445 aa9.94□□□□□ -0.82
SSX4-201ENST00000595689 DIP2BQ9P265 1576 aa9.93□□□□□ -0.82
SSX4-201ENST00000595689 TTBK1Q5TCY1 1321 aaPredicted RBP9.92□□□□□ -0.82
SSX4-201ENST00000595689 ABCC10Q5T3U5 1492 aa9.91□□□□□ -0.82
SSX4-201ENST00000595689 ABCC2Q92887 1545 aa9.9□□□□□ -0.82
SSX4-201ENST00000595689 UHRF1BP1LA0JNW5 1464 aa9.9□□□□□ -0.83
SSX4-201ENST00000595689 EEA1Q15075 1411 aa9.89□□□□□ -0.83
SSX4-201ENST00000595689 UACAQ9BZF9 1416 aa9.89□□□□□ -0.83
SSX4-201ENST00000595689 ZCCHC11Q5TAX3 1644 aaKnown RBP9.89□□□□□ -0.83
SSX4-201ENST00000595689 NPM1P06748 294 aaKnown RBP eCLIP9.88□□□□□ -0.83
SSX4-201ENST00000595689 CSRNP3Q8WYN3 585 aa9.88□□□□□ -0.83
SSX4-201ENST00000595689 GOLGA3Q08378 1498 aa9.87□□□□□ -0.83
SSX4-201ENST00000595689 KIF21BO75037 1637 aa9.86□□□□□ -0.83
SSX4-201ENST00000595689 ABCA8O94911 1581 aa9.86□□□□□ -0.83
SSX4-201ENST00000595689 SAMD9Q5K651 1589 aa9.86□□□□□ -0.83
SSX4-201ENST00000595689 KDM5BQ9UGL1 1544 aa9.86□□□□□ -0.83
SSX4-201ENST00000595689 PLB1Q6P1J6 1458 aa9.85□□□□□ -0.83
SSX4-201ENST00000595689 TSPOAP1O95153 1857 aa9.85□□□□□ -0.83
SSX4-201ENST00000595689 ASXL2Q76L83 1435 aa9.85□□□□□ -0.83
SSX4-201ENST00000595689 FAM69CQ0P6D2 419 aa9.85□□□□□ -0.83
SSX4-201ENST00000595689 FAM9AQ8IZU1 332 aaPredicted RBP9.85□□□□□ -0.83
SSX4-201ENST00000595689 PPRC1Q5VV67 1664 aaKnown RBP9.83□□□□□ -0.84
SSX4-201ENST00000595689 GLI2P10070 1586 aa9.82□□□□□ -0.84
SSX4-201ENST00000595689 MAP3K4Q9Y6R4 1608 aa9.8□□□□□ -0.84
SSX4-201ENST00000595689 EPRSP07814 1512 aaKnown RBP9.8□□□□□ -0.84
SSX4-201ENST00000595689 KDM6BO15054 1643 aa9.79□□□□□ -0.84
SSX4-201ENST00000595689 P3H3Q8IVL6 736 aa9.79□□□□□ -0.84
SSX4-201ENST00000595689 WDR7Q9Y4E6 1490 aa9.79□□□□□ -0.84
SSX4-201ENST00000595689 RAPGEF6Q8TEU7 1601 aa9.78□□□□□ -0.84
SSX4-201ENST00000595689 FHOD3Q2V2M9 1422 aa9.77□□□□□ -0.85
SSX4-201ENST00000595689 RANGAP1P46060 587 aaPredicted RBP9.76□□□□□ -0.85
SSX4-201ENST00000595689 EFCAB5A4FU69 1503 aa9.76□□□□□ -0.85
SSX4-201ENST00000595689 EHMT2Q96KQ7 1210 aa9.75□□□□□ -0.85
SSX4-201ENST00000595689 CFAP43Q8NDM7 1665 aa9.74□□□□□ -0.85
SSX4-201ENST00000595689 ATP10BO94823 1461 aa9.74□□□□□ -0.85
SSX4-201ENST00000595689 ARID3CA6NKF2 412 aa9.73□□□□□ -0.85
SSX4-201ENST00000595689 NUP153P49790 1475 aaKnown RBP9.72□□□□□ -0.85
SSX4-201ENST00000595689 TEX14Q8IWB6 1497 aa9.71□□□□□ -0.86
SSX4-201ENST00000595689 COL17A1Q9UMD9 1497 aaPredicted RBP9.71□□□□□ -0.86
SSX4-201ENST00000595689 ARHGAP35Q9NRY4 1499 aa9.7□□□□□ -0.86
SSX4-201ENST00000595689 ABCA9Q8IUA7 1624 aa9.7□□□□□ -0.86
SSX4-201ENST00000595689 UBTFP17480 764 aaKnown RBP9.69□□□□□ -0.86
SSX4-201ENST00000595689 MAGI3Q5TCQ9 1506 aa9.69□□□□□ -0.86
SSX4-201ENST00000595689 KCNH8Q96L42 1107 aa9.69□□□□□ -0.86
SSX4-201ENST00000595689 CD109Q6YHK3 1445 aa9.68□□□□□ -0.86
SSX4-201ENST00000595689 CDK13Q14004 1512 aaKnown RBP9.66□□□□□ -0.86
SSX4-201ENST00000595689 LRRIQ1Q96JM4 1722 aa9.66□□□□□ -0.86
SSX4-201ENST00000595689 HECW1Q76N89 1606 aa9.66□□□□□ -0.86
SSX4-201ENST00000595689 POTEDQ86YR6 584 aa9.64□□□□□ -0.87
SSX4-201ENST00000595689 FMN1Q68DA7 1419 aa9.64□□□□□ -0.87
SSX4-201ENST00000595689 TTC37Q6PGP7 1564 aa9.63□□□□□ -0.87
SSX4-201ENST00000595689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.63□□□□□ -0.87
SSX4-201ENST00000595689 HNRNPUL2Q1KMD3 747 aaKnown RBP9.63□□□□□ -0.87
SSX4-201ENST00000595689 PCF11O94913 1555 aaKnown RBP9.63□□□□□ -0.87
SSX4-201ENST00000595689 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.62□□□□□ -0.87
SSX4-201ENST00000595689 FRMPD1Q5SYB0 1578 aa9.61□□□□□ -0.87
SSX4-201ENST00000595689 ARAP3Q8WWN8 1544 aa9.61□□□□□ -0.87
SSX4-201ENST00000595689 KDM4FA0A1W2PPD8 638 aa9.59□□□□□ -0.87
SSX4-201ENST00000595689 PLEKHD1A6NEE1 506 aa9.59□□□□□ -0.87
SSX4-201ENST00000595689 KIF14Q15058 1648 aa9.59□□□□□ -0.87
SSX4-201ENST00000595689 NEO1Q92859 1461 aa9.59□□□□□ -0.87
SSX4-201ENST00000595689 ADGRL1O94910 1474 aa9.58□□□□□ -0.88
SSX4-201ENST00000595689 CFAP74Q9C0B2 1584 aa9.58□□□□□ -0.88
SSX4-201ENST00000595689 ATP1B4Q9UN42 357 aaPredicted RBP9.57□□□□□ -0.88
SSX4-201ENST00000595689 CLIP1P30622 1438 aa9.56□□□□□ -0.88
SSX4-201ENST00000595689 RICTORQ6R327 1708 aa9.56□□□□□ -0.88
SSX4-201ENST00000595689 MYO5CQ9NQX4 1742 aa9.56□□□□□ -0.88
SSX4-201ENST00000595689 CASKIN1Q8WXD9 1431 aa9.56□□□□□ -0.88
SSX4-201ENST00000595689 FANCAO15360 1455 aa9.55□□□□□ -0.88
SSX4-201ENST00000595689 PHLDB1Q86UU1 1377 aa9.55□□□□□ -0.88
SSX4-201ENST00000595689 TROQ12816 1431 aaPredicted RBP9.55□□□□□ -0.88
SSX4-201ENST00000595689 SCAF1Q9H7N4 1312 aaKnown RBP9.55□□□□□ -0.88
SSX4-201ENST00000595689 FYCO1Q9BQS8 1478 aa9.54□□□□□ -0.88
SSX4-201ENST00000595689 AKNAQ7Z591 1439 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms