RNA–Protein interactions for RNA: ENST00000595452.1

TMEM38A-202, Transcript of transmembrane protein 38A, humanhuman

TSL 2

Gene TMEM38A, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-202ENST00000595452 RAPGEF2Q9Y4G8 1499 aa22.98■■□□□ 1.27
TMEM38A-202ENST00000595452 JPH4Q96JJ6 628 aa22.96■■□□□ 1.27
TMEM38A-202ENST00000595452 PRG4Q92954 1404 aaPredicted RBP22.96■■□□□ 1.27
TMEM38A-202ENST00000595452 ERCC6L2Q5T890 1561 aa22.93■■□□□ 1.26
TMEM38A-202ENST00000595452 IQGAP2Q13576 1575 aa22.92■■□□□ 1.26
TMEM38A-202ENST00000595452 EEA1Q15075 1411 aa22.91■■□□□ 1.26
TMEM38A-202ENST00000595452 CTTNBP2Q8WZ74 1663 aa22.87■■□□□ 1.25
TMEM38A-202ENST00000595452 CARMIL2Q6F5E8 1435 aa22.84■■□□□ 1.25
TMEM38A-202ENST00000595452 PRXQ9BXM0 1461 aa22.82■■□□□ 1.24
TMEM38A-202ENST00000595452 CSRNP3Q8WYN3 585 aa22.78■■□□□ 1.24
TMEM38A-202ENST00000595452 UGGT2Q9NYU1 1516 aa22.74■■□□□ 1.23
TMEM38A-202ENST00000595452 CHIC1Q5VXU3 224 aa22.74■■□□□ 1.23
TMEM38A-202ENST00000595452 TRHP20396 242 aaPredicted RBP22.73■■□□□ 1.23
TMEM38A-202ENST00000595452 TNIKQ9UKE5 1360 aa22.7■■□□□ 1.22
TMEM38A-202ENST00000595452 GOLGA3Q08378 1498 aa22.69■■□□□ 1.22
TMEM38A-202ENST00000595452 KIAA0556O60303 1618 aa22.68■■□□□ 1.22
TMEM38A-202ENST00000595452 PTPRGP23470 1445 aa22.68■■□□□ 1.22
TMEM38A-202ENST00000595452 NPM1P06748 294 aaKnown RBP eCLIP22.67■■□□□ 1.22
TMEM38A-202ENST00000595452 DISP1Q96F81 1524 aa22.66■■□□□ 1.22
TMEM38A-202ENST00000595452 KIF21BO75037 1637 aa22.65■■□□□ 1.22
TMEM38A-202ENST00000595452 FAM9AQ8IZU1 332 aaPredicted RBP22.64■■□□□ 1.21
TMEM38A-202ENST00000595452 ADCY10Q96PN6 1610 aa22.64■■□□□ 1.21
TMEM38A-202ENST00000595452 TTBK1Q5TCY1 1321 aaPredicted RBP22.6■■□□□ 1.21
TMEM38A-202ENST00000595452 MAPKBP1O60336 1514 aa22.57■■□□□ 1.2
TMEM38A-202ENST00000595452 UACAQ9BZF9 1416 aa22.54■■□□□ 1.2
TMEM38A-202ENST00000595452 UHRF1BP1LA0JNW5 1464 aa22.54■■□□□ 1.2
TMEM38A-202ENST00000595452 ABCC2Q92887 1545 aa22.52■■□□□ 1.2
TMEM38A-202ENST00000595452 SAMD9Q5K651 1589 aa22.48■■□□□ 1.19
TMEM38A-202ENST00000595452 KIF13AQ9H1H9 1805 aa22.47■■□□□ 1.19
TMEM38A-202ENST00000595452 EFCAB5A4FU69 1503 aa22.44■■□□□ 1.18
TMEM38A-202ENST00000595452 ABCC10Q5T3U5 1492 aa22.42■■□□□ 1.18
TMEM38A-202ENST00000595452 UBTFP17480 764 aaKnown RBP22.42■■□□□ 1.18
TMEM38A-202ENST00000595452 DIP2BQ9P265 1576 aa22.42■■□□□ 1.18
TMEM38A-202ENST00000595452 ZCCHC11Q5TAX3 1644 aaKnown RBP22.41■■□□□ 1.18
TMEM38A-202ENST00000595452 KDM5BQ9UGL1 1544 aa22.41■■□□□ 1.18
TMEM38A-202ENST00000595452 PLB1Q6P1J6 1458 aa22.4■■□□□ 1.18
TMEM38A-202ENST00000595452 ABCA8O94911 1581 aa22.39■■□□□ 1.18
TMEM38A-202ENST00000595452 FAM69CQ0P6D2 419 aa22.36■■□□□ 1.17
TMEM38A-202ENST00000595452 P3H3Q8IVL6 736 aa22.36■■□□□ 1.17
TMEM38A-202ENST00000595452 ASXL2Q76L83 1435 aa22.35■■□□□ 1.17
TMEM38A-202ENST00000595452 RANGAP1P46060 587 aaPredicted RBP22.35■■□□□ 1.17
TMEM38A-202ENST00000595452 EHMT2Q96KQ7 1210 aa22.33■■□□□ 1.17
TMEM38A-202ENST00000595452 RAPGEF6Q8TEU7 1601 aa22.32■■□□□ 1.16
TMEM38A-202ENST00000595452 FHOD3Q2V2M9 1422 aa22.29■■□□□ 1.16
TMEM38A-202ENST00000595452 GLI2P10070 1586 aa22.28■■□□□ 1.16
TMEM38A-202ENST00000595452 WDR7Q9Y4E6 1490 aa22.27■■□□□ 1.16
TMEM38A-202ENST00000595452 TSPOAP1O95153 1857 aa22.26■■□□□ 1.15
TMEM38A-202ENST00000595452 EPRSP07814 1512 aaKnown RBP22.22■■□□□ 1.15
TMEM38A-202ENST00000595452 FMN1Q68DA7 1419 aa22.21■■□□□ 1.15
TMEM38A-202ENST00000595452 MAP3K4Q9Y6R4 1608 aa22.18■■□□□ 1.14
TMEM38A-202ENST00000595452 ARHGAP35Q9NRY4 1499 aa22.17■■□□□ 1.14
TMEM38A-202ENST00000595452 ATP10BO94823 1461 aa22.16■■□□□ 1.14
TMEM38A-202ENST00000595452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.16■■□□□ 1.14
TMEM38A-202ENST00000595452 HNRNPUL2Q1KMD3 747 aaKnown RBP22.16■■□□□ 1.14
TMEM38A-202ENST00000595452 CFAP43Q8NDM7 1665 aa22.16■■□□□ 1.14
TMEM38A-202ENST00000595452 TEX14Q8IWB6 1497 aa22.15■■□□□ 1.14
TMEM38A-202ENST00000595452 HECW1Q76N89 1606 aa22.15■■□□□ 1.14
TMEM38A-202ENST00000595452 NUP153P49790 1475 aaKnown RBP22.15■■□□□ 1.14
TMEM38A-202ENST00000595452 KDM6BO15054 1643 aa22.14■■□□□ 1.14
TMEM38A-202ENST00000595452 ARID3CA6NKF2 412 aa22.13■■□□□ 1.13
TMEM38A-202ENST00000595452 PPRC1Q5VV67 1664 aaKnown RBP22.1■■□□□ 1.13
TMEM38A-202ENST00000595452 KCNH8Q96L42 1107 aa22.09■■□□□ 1.13
TMEM38A-202ENST00000595452 CLIP1P30622 1438 aa22.06■■□□□ 1.12
TMEM38A-202ENST00000595452 CD109Q6YHK3 1445 aa22.06■■□□□ 1.12
TMEM38A-202ENST00000595452 PLEKHD1A6NEE1 506 aa22.04■■□□□ 1.12
TMEM38A-202ENST00000595452 ATP1B4Q9UN42 357 aaPredicted RBP22.04■■□□□ 1.12
TMEM38A-202ENST00000595452 ABCA9Q8IUA7 1624 aa22.04■■□□□ 1.12
TMEM38A-202ENST00000595452 MAGI3Q5TCQ9 1506 aa22.03■■□□□ 1.12
TMEM38A-202ENST00000595452 CDK11AQ9UQ88 783 aaPredicted RBP22■■□□□ 1.11
TMEM38A-202ENST00000595452 CDK13Q14004 1512 aaKnown RBP22■■□□□ 1.11
TMEM38A-202ENST00000595452 PCF11O94913 1555 aaKnown RBP21.98■■□□□ 1.11
TMEM38A-202ENST00000595452 CCDC18Q5T9S5 1454 aa21.97■■□□□ 1.11
TMEM38A-202ENST00000595452 FYCO1Q9BQS8 1478 aa21.96■■□□□ 1.11
TMEM38A-202ENST00000595452 CASKIN1Q8WXD9 1431 aa21.96■■□□□ 1.11
TMEM38A-202ENST00000595452 CEP162Q5TB80 1403 aa21.93■■□□□ 1.1
TMEM38A-202ENST00000595452 CFAP74Q9C0B2 1584 aa21.92■■□□□ 1.1
TMEM38A-202ENST00000595452 PHLDB1Q86UU1 1377 aa21.91■■□□□ 1.1
TMEM38A-202ENST00000595452 LRRIQ1Q96JM4 1722 aa21.91■■□□□ 1.1
TMEM38A-202ENST00000595452 KIF14Q15058 1648 aa21.91■■□□□ 1.1
TMEM38A-202ENST00000595452 NEO1Q92859 1461 aa21.88■■□□□ 1.09
TMEM38A-202ENST00000595452 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.87■■□□□ 1.09
TMEM38A-202ENST00000595452 TTC37Q6PGP7 1564 aa21.86■■□□□ 1.09
TMEM38A-202ENST00000595452 MYO5CQ9NQX4 1742 aa21.86■■□□□ 1.09
TMEM38A-202ENST00000595452 TROQ12816 1431 aaPredicted RBP21.85■■□□□ 1.09
TMEM38A-202ENST00000595452 ARAP3Q8WWN8 1544 aa21.83■■□□□ 1.09
TMEM38A-202ENST00000595452 FANCAO15360 1455 aa21.8■■□□□ 1.08
TMEM38A-202ENST00000595452 COL17A1Q9UMD9 1497 aaPredicted RBP21.79■■□□□ 1.08
TMEM38A-202ENST00000595452 LOC105371045A0A1W2PR82 267 aa21.77■■□□□ 1.08
TMEM38A-202ENST00000595452 PLCH2O75038 1416 aa21.74■■□□□ 1.07
TMEM38A-202ENST00000595452 AKNAQ7Z591 1439 aa21.72■■□□□ 1.07
TMEM38A-202ENST00000595452 ARHGAP5Q13017 1502 aa21.71■■□□□ 1.07
TMEM38A-202ENST00000595452 AEBP2Q6ZN18 517 aaPredicted RBP21.71■■□□□ 1.07
TMEM38A-202ENST00000595452 DENND4BO75064 1496 aaPredicted RBP21.71■■□□□ 1.07
TMEM38A-202ENST00000595452 MTUS2Q5JR59 1369 aa21.7■■□□□ 1.06
TMEM38A-202ENST00000595452 PREX2Q70Z35 1606 aa21.69■■□□□ 1.06
TMEM38A-202ENST00000595452 EFCAB2Q5VUJ9 269 aa21.69■■□□□ 1.06
TMEM38A-202ENST00000595452 VPS8Q8N3P4 1428 aa21.69■■□□□ 1.06
TMEM38A-202ENST00000595452 ADGRL1O94910 1474 aa21.69■■□□□ 1.06
TMEM38A-202ENST00000595452 EHBP1L1Q8N3D4 1523 aa21.68■■□□□ 1.06
TMEM38A-202ENST00000595452 RICTORQ6R327 1708 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms