RNA–Protein interactions for RNA: ENST00000595369.1

SH2D3A-203, Transcript of SH2 domain containing 3A, humanhuman

TSL 2

Gene SH2D3A, Length 3,493 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-203ENST00000595369 SENP3-EIF4A1A0A087X0R7 540 aa12.92□□□□□ -0.34
SH2D3A-203ENST00000595369 ANP32EQ9BTT0 268 aa12.91□□□□□ -0.34
SH2D3A-203ENST00000595369 RAB3GAP2Q9H2M9 1393 aa12.89□□□□□ -0.35
SH2D3A-203ENST00000595369 CLSPNQ9HAW4 1339 aa12.89□□□□□ -0.35
SH2D3A-203ENST00000595369 WDR62O43379 1518 aa12.89□□□□□ -0.35
SH2D3A-203ENST00000595369 CCNB3Q8WWL7 1395 aa12.88□□□□□ -0.35
SH2D3A-203ENST00000595369 ARID3CA6NKF2 412 aa12.87□□□□□ -0.35
SH2D3A-203ENST00000595369 CFTRP13569 1480 aa12.84□□□□□ -0.35
SH2D3A-203ENST00000595369 KIF21AQ7Z4S6 1674 aa12.82□□□□□ -0.36
SH2D3A-203ENST00000595369 PHLDB1Q86UU1 1377 aa12.78□□□□□ -0.36
SH2D3A-203ENST00000595369 CHIC2Q9UKJ5 165 aa12.78□□□□□ -0.36
SH2D3A-203ENST00000595369 BCL11AQ9H165 835 aa12.78□□□□□ -0.36
SH2D3A-203ENST00000595369 PRXQ9BXM0 1461 aa12.78□□□□□ -0.36
SH2D3A-203ENST00000595369 ARHGAP35Q9NRY4 1499 aa12.78□□□□□ -0.36
SH2D3A-203ENST00000595369 RBM19Q9Y4C8 960 aaKnown RBP12.76□□□□□ -0.37
SH2D3A-203ENST00000595369 PDS5BQ9NTI5 1447 aa12.76□□□□□ -0.37
SH2D3A-203ENST00000595369 NEFLP07196 543 aa12.75□□□□□ -0.37
SH2D3A-203ENST00000595369 KIF27Q86VH2 1401 aa12.75□□□□□ -0.37
SH2D3A-203ENST00000595369 ANP32CO43423 234 aa12.74□□□□□ -0.37
SH2D3A-203ENST00000595369 RRBP1Q9P2E9 1410 aaKnown RBP12.74□□□□□ -0.37
SH2D3A-203ENST00000595369 PPP1R15AO75807 674 aaPredicted RBP12.74□□□□□ -0.37
SH2D3A-203ENST00000595369 MRC2Q9UBG0 1479 aa12.73□□□□□ -0.37
SH2D3A-203ENST00000595369 CUX1P39880 1505 aa12.73□□□□□ -0.37
SH2D3A-203ENST00000595369 CADPSQ9ULU8 1353 aa12.73□□□□□ -0.37
SH2D3A-203ENST00000595369 HNRNPUQ00839 825 aaKnown RBP eCLIP12.73□□□□□ -0.37
SH2D3A-203ENST00000595369 FOXD1Q16676 465 aa12.73□□□□□ -0.37
SH2D3A-203ENST00000595369 IGF1RP08069 1367 aa12.71□□□□□ -0.37
SH2D3A-203ENST00000595369 RRP7BPQ9NSQ0 103 aa12.71□□□□□ -0.37
SH2D3A-203ENST00000595369 SETD5Q9C0A6 1442 aa12.71□□□□□ -0.38
SH2D3A-203ENST00000595369 TOP2BQ02880 1626 aa12.7□□□□□ -0.38
SH2D3A-203ENST00000595369 MAPKBP1O60336 1514 aa12.7□□□□□ -0.38
SH2D3A-203ENST00000595369 CCDC184Q52MB2 194 aa12.7□□□□□ -0.38
SH2D3A-203ENST00000595369 POLR3GLQ9BT43 218 aa12.68□□□□□ -0.38
SH2D3A-203ENST00000595369 CARMIL1Q5VZK9 1371 aa12.68□□□□□ -0.38
SH2D3A-203ENST00000595369 FHOD3Q2V2M9 1422 aa12.68□□□□□ -0.38
SH2D3A-203ENST00000595369 FAM9BQ8IZU0 186 aa12.66□□□□□ -0.38
SH2D3A-203ENST00000595369 MSH5O43196 834 aa12.65□□□□□ -0.38
SH2D3A-203ENST00000595369 DNMBPQ6XZF7 1577 aa12.65□□□□□ -0.38
SH2D3A-203ENST00000595369 TONSLQ96HA7 1378 aa12.63□□□□□ -0.39
SH2D3A-203ENST00000595369 ABCA5Q8WWZ7 1642 aa12.62□□□□□ -0.39
SH2D3A-203ENST00000595369 ERICH3Q5RHP9 1530 aa12.61□□□□□ -0.39
SH2D3A-203ENST00000595369 B4GALNT3Q6L9W6 998 aa12.59□□□□□ -0.39
SH2D3A-203ENST00000595369 TARBP1Q13395 1621 aaKnown RBP12.59□□□□□ -0.39
SH2D3A-203ENST00000595369 LRRC9Q6ZRR7 1453 aa12.59□□□□□ -0.39
SH2D3A-203ENST00000595369 RAD54L2Q9Y4B4 1467 aa12.58□□□□□ -0.4
SH2D3A-203ENST00000595369 C11orf95C9JLR9 678 aaPredicted RBP12.57□□□□□ -0.4
SH2D3A-203ENST00000595369 ZNF326Q5BKZ1 582 aaKnown RBP12.57□□□□□ -0.4
SH2D3A-203ENST00000595369 HSPA5P11021 654 aaKnown RBP12.57□□□□□ -0.4
SH2D3A-203ENST00000595369 PHF23Q9BUL5 403 aaPredicted RBP12.57□□□□□ -0.4
SH2D3A-203ENST00000595369 CCER2I3L3R5 266 aa12.56□□□□□ -0.4
SH2D3A-203ENST00000595369 FANCD2Q9BXW9 1451 aa12.56□□□□□ -0.4
SH2D3A-203ENST00000595369 PTPRKQ15262 1439 aa12.55□□□□□ -0.4
SH2D3A-203ENST00000595369 ERCC6Q03468 1493 aa12.53□□□□□ -0.4
SH2D3A-203ENST00000595369 MTUS2Q5JR59 1369 aa12.53□□□□□ -0.4
SH2D3A-203ENST00000595369 WASHC2AQ641Q2 1341 aa12.53□□□□□ -0.4
SH2D3A-203ENST00000595369 ERICH6Q7L0X2 663 aa12.53□□□□□ -0.4
SH2D3A-203ENST00000595369 AQRO60306 1485 aaKnown RBP eCLIP12.53□□□□□ -0.4
SH2D3A-203ENST00000595369 FGD5Q6ZNL6 1462 aa12.53□□□□□ -0.4
SH2D3A-203ENST00000595369 TDRD9Q8NDG6 1382 aaKnown RBP12.52□□□□□ -0.4
SH2D3A-203ENST00000595369 CDK11AQ9UQ88 783 aaPredicted RBP12.52□□□□□ -0.4
SH2D3A-203ENST00000595369 TIAM1Q13009 1591 aa12.52□□□□□ -0.41
SH2D3A-203ENST00000595369 IFT140Q96RY7 1462 aa12.52□□□□□ -0.41
SH2D3A-203ENST00000595369 NESP48681 1621 aa12.51□□□□□ -0.41
SH2D3A-203ENST00000595369 SALL2Q9Y467 1007 aaPredicted RBP12.5□□□□□ -0.41
SH2D3A-203ENST00000595369 MRS2Q9HD23 443 aa12.49□□□□□ -0.41
SH2D3A-203ENST00000595369 L3MBTL2Q969R5 705 aa12.49□□□□□ -0.41
SH2D3A-203ENST00000595369 URB2Q14146 1524 aaKnown RBP12.49□□□□□ -0.41
SH2D3A-203ENST00000595369 SHROOM2Q13796 1616 aa12.48□□□□□ -0.41
SH2D3A-203ENST00000595369 NBR1Q14596 966 aa12.48□□□□□ -0.41
SH2D3A-203ENST00000595369 TIMELESSQ9UNS1 1208 aa12.48□□□□□ -0.41
SH2D3A-203ENST00000595369 SENP3Q9H4L4 574 aaPredicted RBP12.47□□□□□ -0.41
SH2D3A-203ENST00000595369 PCF11O94913 1555 aaKnown RBP12.46□□□□□ -0.42
SH2D3A-203ENST00000595369 TOPBP1Q92547 1522 aa12.45□□□□□ -0.42
SH2D3A-203ENST00000595369 CCDC18Q5T9S5 1454 aa12.44□□□□□ -0.42
SH2D3A-203ENST00000595369 ZNF644Q9H582 1327 aaPredicted RBP12.44□□□□□ -0.42
SH2D3A-203ENST00000595369 PBRM1Q86U86 1689 aa12.44□□□□□ -0.42
SH2D3A-203ENST00000595369 NBPF8Q3BBV2 869 aa12.43□□□□□ -0.42
SH2D3A-203ENST00000595369 EIF4G2P78344 907 aaKnown RBP eCLIP12.43□□□□□ -0.42
SH2D3A-203ENST00000595369 FHAD1B1AJZ9 1412 aa12.42□□□□□ -0.42
SH2D3A-203ENST00000595369 FGD6Q6ZV73 1430 aa12.42□□□□□ -0.42
SH2D3A-203ENST00000595369 ZNF777Q9ULD5 760 aaPredicted RBP12.42□□□□□ -0.42
SH2D3A-203ENST00000595369 MPHOSPH9Q99550 1183 aa12.41□□□□□ -0.42
SH2D3A-203ENST00000595369 FANCIQ9NVI1 1328 aa12.41□□□□□ -0.42
SH2D3A-203ENST00000595369 CUL7Q14999 1698 aa12.39□□□□□ -0.43
SH2D3A-203ENST00000595369 PAK3O75914 559 aaPredicted RBP12.39□□□□□ -0.43
SH2D3A-203ENST00000595369 PRKRIP1Q9H875 184 aaPredicted RBP12.39□□□□□ -0.43
SH2D3A-203ENST00000595369 EIF4G3O43432 1585 aaKnown RBP12.37□□□□□ -0.43
SH2D3A-203ENST00000595369 NAIPQ13075 1403 aa12.37□□□□□ -0.43
SH2D3A-203ENST00000595369 PPP4R2Q9NY27 417 aa12.37□□□□□ -0.43
SH2D3A-203ENST00000595369 KDM2AQ9Y2K7 1162 aa12.37□□□□□ -0.43
SH2D3A-203ENST00000595369 SLC4A1APQ9BWU0 796 aaKnown RBP12.36□□□□□ -0.43
SH2D3A-203ENST00000595369 NPM2Q86SE8 214 aaKnown RBP12.36□□□□□ -0.43
SH2D3A-203ENST00000595369 MAP3K1Q13233 1512 aa12.35□□□□□ -0.43
SH2D3A-203ENST00000595369 SKAP1Q86WV1 359 aa12.35□□□□□ -0.43
SH2D3A-203ENST00000595369 ABCA10Q8WWZ4 1543 aa12.34□□□□□ -0.43
SH2D3A-203ENST00000595369 UACAQ9BZF9 1416 aa12.34□□□□□ -0.43
SH2D3A-203ENST00000595369 DEKP35659 375 aaKnown RBP12.34□□□□□ -0.43
SH2D3A-203ENST00000595369 NCOA2Q15596 1464 aa12.33□□□□□ -0.44
SH2D3A-203ENST00000595369 AKNAQ7Z591 1439 aa12.33□□□□□ -0.44
SH2D3A-203ENST00000595369 CASKIN1Q8WXD9 1431 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms