RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 IGF1RP08069 1367 aa18.92■□□□□ 0.62
USE1-203ENST00000593597 JPH4Q96JJ6 628 aa18.91■□□□□ 0.62
USE1-203ENST00000593597 ADCY10Q96PN6 1610 aa18.9■□□□□ 0.62
USE1-203ENST00000593597 KIF27Q86VH2 1401 aa18.87■□□□□ 0.61
USE1-203ENST00000593597 KIAA0586Q9BVV6 1533 aa18.86■□□□□ 0.61
USE1-203ENST00000593597 MAPKBP1O60336 1514 aa18.82■□□□□ 0.6
USE1-203ENST00000593597 DIP2BQ9P265 1576 aa18.81■□□□□ 0.6
USE1-203ENST00000593597 ABCC10Q5T3U5 1492 aa18.77■□□□□ 0.6
USE1-203ENST00000593597 CARMIL1Q5VZK9 1371 aa18.75■□□□□ 0.59
USE1-203ENST00000593597 IQGAP2Q13576 1575 aa18.72■□□□□ 0.59
USE1-203ENST00000593597 TSPOAP1O95153 1857 aa18.69■□□□□ 0.58
USE1-203ENST00000593597 DISP1Q96F81 1524 aa18.67■□□□□ 0.58
USE1-203ENST00000593597 FAM69CQ0P6D2 419 aa18.66■□□□□ 0.58
USE1-203ENST00000593597 PTPRGP23470 1445 aa18.64■□□□□ 0.57
USE1-203ENST00000593597 PPRC1Q5VV67 1664 aaKnown RBP18.63■□□□□ 0.57
USE1-203ENST00000593597 TNIKQ9UKE5 1360 aa18.62■□□□□ 0.57
USE1-203ENST00000593597 ABCC2Q92887 1545 aa18.62■□□□□ 0.57
USE1-203ENST00000593597 UGGT2Q9NYU1 1516 aa18.61■□□□□ 0.57
USE1-203ENST00000593597 NPM1P06748 294 aaKnown RBP eCLIP18.61■□□□□ 0.57
USE1-203ENST00000593597 KDM6BO15054 1643 aa18.6■□□□□ 0.57
USE1-203ENST00000593597 RAPGEF2Q9Y4G8 1499 aa18.6■□□□□ 0.57
USE1-203ENST00000593597 AEBP2Q6ZN18 517 aaPredicted RBP18.6■□□□□ 0.57
USE1-203ENST00000593597 CTTNBP2Q8WZ74 1663 aa18.6■□□□□ 0.57
USE1-203ENST00000593597 KIAA0556O60303 1618 aa18.6■□□□□ 0.57
USE1-203ENST00000593597 CARMIL2Q6F5E8 1435 aa18.59■□□□□ 0.57
USE1-203ENST00000593597 UHRF1BP1LA0JNW5 1464 aa18.58■□□□□ 0.57
USE1-203ENST00000593597 TTBK1Q5TCY1 1321 aaPredicted RBP18.57■□□□□ 0.56
USE1-203ENST00000593597 GLI2P10070 1586 aa18.55■□□□□ 0.56
USE1-203ENST00000593597 ZCCHC11Q5TAX3 1644 aaKnown RBP18.55■□□□□ 0.56
USE1-203ENST00000593597 ASXL2Q76L83 1435 aa18.55■□□□□ 0.56
USE1-203ENST00000593597 UACAQ9BZF9 1416 aa18.54■□□□□ 0.56
USE1-203ENST00000593597 KDM5BQ9UGL1 1544 aa18.52■□□□□ 0.56
USE1-203ENST00000593597 MAP3K4Q9Y6R4 1608 aa18.5■□□□□ 0.55
USE1-203ENST00000593597 PLB1Q6P1J6 1458 aa18.49■□□□□ 0.55
USE1-203ENST00000593597 EPRSP07814 1512 aaKnown RBP18.47■□□□□ 0.55
USE1-203ENST00000593597 PRXQ9BXM0 1461 aa18.46■□□□□ 0.54
USE1-203ENST00000593597 ABCA8O94911 1581 aa18.43■□□□□ 0.54
USE1-203ENST00000593597 COL17A1Q9UMD9 1497 aaPredicted RBP18.42■□□□□ 0.54
USE1-203ENST00000593597 KDM4FA0A1W2PPD8 638 aa18.4■□□□□ 0.54
USE1-203ENST00000593597 WDR7Q9Y4E6 1490 aa18.37■□□□□ 0.53
USE1-203ENST00000593597 GOLGA3Q08378 1498 aa18.35■□□□□ 0.53
USE1-203ENST00000593597 CFAP43Q8NDM7 1665 aa18.32■□□□□ 0.52
USE1-203ENST00000593597 SAMD9Q5K651 1589 aa18.31■□□□□ 0.52
USE1-203ENST00000593597 TEX14Q8IWB6 1497 aa18.29■□□□□ 0.52
USE1-203ENST00000593597 ADGRL1O94910 1474 aa18.27■□□□□ 0.52
USE1-203ENST00000593597 MAGI3Q5TCQ9 1506 aa18.25■□□□□ 0.51
USE1-203ENST00000593597 ATP10BO94823 1461 aa18.21■□□□□ 0.51
USE1-203ENST00000593597 CD109Q6YHK3 1445 aa18.21■□□□□ 0.51
USE1-203ENST00000593597 RAPGEF6Q8TEU7 1601 aa18.2■□□□□ 0.5
USE1-203ENST00000593597 P3H3Q8IVL6 736 aa18.19■□□□□ 0.5
USE1-203ENST00000593597 ABCA9Q8IUA7 1624 aa18.19■□□□□ 0.5
USE1-203ENST00000593597 CSRNP3Q8WYN3 585 aa18.17■□□□□ 0.5
USE1-203ENST00000593597 KCNH8Q96L42 1107 aa18.17■□□□□ 0.5
USE1-203ENST00000593597 ARID3CA6NKF2 412 aa18.16■□□□□ 0.5
USE1-203ENST00000593597 KIF21BO75037 1637 aa18.16■□□□□ 0.5
USE1-203ENST00000593597 NUP153P49790 1475 aaKnown RBP18.13■□□□□ 0.49
USE1-203ENST00000593597 EEA1Q15075 1411 aa18.12■□□□□ 0.49
USE1-203ENST00000593597 FHOD3Q2V2M9 1422 aa18.11■□□□□ 0.49
USE1-203ENST00000593597 ARAP3Q8WWN8 1544 aa18.11■□□□□ 0.49
USE1-203ENST00000593597 FRMPD1Q5SYB0 1578 aa18.1■□□□□ 0.49
USE1-203ENST00000593597 HECW2Q9P2P5 1572 aa18.08■□□□□ 0.48
USE1-203ENST00000593597 EFCAB5A4FU69 1503 aa18.03■□□□□ 0.48
USE1-203ENST00000593597 FAM9AQ8IZU1 332 aaPredicted RBP18.02■□□□□ 0.48
USE1-203ENST00000593597 RANGAP1P46060 587 aaPredicted RBP18.01■□□□□ 0.47
USE1-203ENST00000593597 NEO1Q92859 1461 aa18.01■□□□□ 0.47
USE1-203ENST00000593597 TTC37Q6PGP7 1564 aa18■□□□□ 0.47
USE1-203ENST00000593597 ADAMTSL3P82987 1691 aa18■□□□□ 0.47
USE1-203ENST00000593597 RICTORQ6R327 1708 aa18■□□□□ 0.47
USE1-203ENST00000593597 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.98■□□□□ 0.47
USE1-203ENST00000593597 CDK13Q14004 1512 aaKnown RBP17.98■□□□□ 0.47
USE1-203ENST00000593597 SIGLEC1Q9BZZ2 1709 aa17.96■□□□□ 0.47
USE1-203ENST00000593597 BCORL1Q5H9F3 1711 aa17.95■□□□□ 0.46
USE1-203ENST00000593597 PHLDB1Q86UU1 1377 aa17.95■□□□□ 0.46
USE1-203ENST00000593597 RAPGEF3O95398 923 aa17.95■□□□□ 0.46
USE1-203ENST00000593597 ARHGEF40Q8TER5 1519 aa17.94■□□□□ 0.46
USE1-203ENST00000593597 LRRIQ1Q96JM4 1722 aa17.94■□□□□ 0.46
USE1-203ENST00000593597 CFAP74Q9C0B2 1584 aa17.91■□□□□ 0.46
USE1-203ENST00000593597 MADDQ8WXG6 1647 aa17.91■□□□□ 0.46
USE1-203ENST00000593597 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.91■□□□□ 0.46
USE1-203ENST00000593597 HNRNPUL2Q1KMD3 747 aaKnown RBP17.91■□□□□ 0.46
USE1-203ENST00000593597 ARHGAP35Q9NRY4 1499 aa17.9■□□□□ 0.46
USE1-203ENST00000593597 AKNAQ7Z591 1439 aa17.88■□□□□ 0.45
USE1-203ENST00000593597 FANCAO15360 1455 aa17.88■□□□□ 0.45
USE1-203ENST00000593597 PTPRMP28827 1452 aa17.88■□□□□ 0.45
USE1-203ENST00000593597 ZMYM4Q5VZL5 1548 aa17.88■□□□□ 0.45
USE1-203ENST00000593597 HECW1Q76N89 1606 aa17.87■□□□□ 0.45
USE1-203ENST00000593597 DENND4BO75064 1496 aaPredicted RBP17.86■□□□□ 0.45
USE1-203ENST00000593597 KIF14Q15058 1648 aa17.86■□□□□ 0.45
USE1-203ENST00000593597 CHIC1Q5VXU3 224 aa17.85■□□□□ 0.45
USE1-203ENST00000593597 EHMT2Q96KQ7 1210 aa17.85■□□□□ 0.45
USE1-203ENST00000593597 MYO5CQ9NQX4 1742 aa17.84■□□□□ 0.45
USE1-203ENST00000593597 RIMS1Q86UR5 1692 aaKnown RBP17.84■□□□□ 0.45
USE1-203ENST00000593597 PLEKHD1A6NEE1 506 aa17.84■□□□□ 0.45
USE1-203ENST00000593597 ILDR1Q86SU0 546 aaPredicted RBP17.83■□□□□ 0.44
USE1-203ENST00000593597 YEATS2Q9ULM3 1422 aa17.81■□□□□ 0.44
USE1-203ENST00000593597 ZFYVE16Q7Z3T8 1539 aa17.8■□□□□ 0.44
USE1-203ENST00000593597 PLCH2O75038 1416 aa17.79■□□□□ 0.44
USE1-203ENST00000593597 FMN1Q68DA7 1419 aa17.79■□□□□ 0.44
USE1-203ENST00000593597 POGZQ7Z3K3 1410 aa17.78■□□□□ 0.44
USE1-203ENST00000593597 PCF11O94913 1555 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms