RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 CUL7Q14999 1698 aa28.83■■■□□ 2.21
LIG1-205ENST00000593425 KIF27Q86VH2 1401 aa28.81■■■□□ 2.2
LIG1-205ENST00000593425 IGF1RP08069 1367 aa28.81■■■□□ 2.2
LIG1-205ENST00000593425 KIAA0586Q9BVV6 1533 aa28.76■■■□□ 2.19
LIG1-205ENST00000593425 ADCY10Q96PN6 1610 aa28.73■■■□□ 2.19
LIG1-205ENST00000593425 MAPKBP1O60336 1514 aa28.69■■■□□ 2.18
LIG1-205ENST00000593425 AEBP2Q6ZN18 517 aaPredicted RBP28.67■■■□□ 2.18
LIG1-205ENST00000593425 ABCC10Q5T3U5 1492 aa28.66■■■□□ 2.18
LIG1-205ENST00000593425 DIP2BQ9P265 1576 aa28.63■■■□□ 2.17
LIG1-205ENST00000593425 CARMIL1Q5VZK9 1371 aa28.62■■■□□ 2.17
LIG1-205ENST00000593425 NPM1P06748 294 aaKnown RBP eCLIP28.61■■■□□ 2.17
LIG1-205ENST00000593425 FAM69CQ0P6D2 419 aa28.59■■■□□ 2.17
LIG1-205ENST00000593425 IQGAP2Q13576 1575 aa28.51■■■□□ 2.15
LIG1-205ENST00000593425 PTPRGP23470 1445 aa28.49■■■□□ 2.15
LIG1-205ENST00000593425 CARMIL2Q6F5E8 1435 aa28.45■■■□□ 2.15
LIG1-205ENST00000593425 TTBK1Q5TCY1 1321 aaPredicted RBP28.44■■■□□ 2.14
LIG1-205ENST00000593425 TSPOAP1O95153 1857 aa28.44■■■□□ 2.14
LIG1-205ENST00000593425 TNIKQ9UKE5 1360 aa28.44■■■□□ 2.14
LIG1-205ENST00000593425 KDM6BO15054 1643 aa28.4■■■□□ 2.14
LIG1-205ENST00000593425 ABCC2Q92887 1545 aa28.39■■■□□ 2.14
LIG1-205ENST00000593425 DISP1Q96F81 1524 aa28.38■■■□□ 2.13
LIG1-205ENST00000593425 RAPGEF2Q9Y4G8 1499 aa28.36■■■□□ 2.13
LIG1-205ENST00000593425 UHRF1BP1LA0JNW5 1464 aa28.33■■■□□ 2.13
LIG1-205ENST00000593425 UGGT2Q9NYU1 1516 aa28.32■■■□□ 2.12
LIG1-205ENST00000593425 ASXL2Q76L83 1435 aa28.3■■■□□ 2.12
LIG1-205ENST00000593425 UACAQ9BZF9 1416 aa28.29■■■□□ 2.12
LIG1-205ENST00000593425 KIAA0556O60303 1618 aa28.29■■■□□ 2.12
LIG1-205ENST00000593425 PPRC1Q5VV67 1664 aaKnown RBP28.28■■■□□ 2.12
LIG1-205ENST00000593425 PLB1Q6P1J6 1458 aa28.27■■■□□ 2.12
LIG1-205ENST00000593425 GLI2P10070 1586 aa28.26■■■□□ 2.11
LIG1-205ENST00000593425 CTTNBP2Q8WZ74 1663 aa28.23■■■□□ 2.11
LIG1-205ENST00000593425 KDM5BQ9UGL1 1544 aa28.22■■■□□ 2.11
LIG1-205ENST00000593425 ZCCHC11Q5TAX3 1644 aaKnown RBP28.21■■■□□ 2.11
LIG1-205ENST00000593425 EPRSP07814 1512 aaKnown RBP28.15■■■□□ 2.1
LIG1-205ENST00000593425 MAP3K4Q9Y6R4 1608 aa28.14■■■□□ 2.1
LIG1-205ENST00000593425 KDM4FA0A1W2PPD8 638 aa28.11■■■□□ 2.09
LIG1-205ENST00000593425 PRXQ9BXM0 1461 aa28.06■■■□□ 2.08
LIG1-205ENST00000593425 GOLGA3Q08378 1498 aa28.03■■■□□ 2.08
LIG1-205ENST00000593425 COL17A1Q9UMD9 1497 aaPredicted RBP28.03■■■□□ 2.08
LIG1-205ENST00000593425 ABCA8O94911 1581 aa28.02■■■□□ 2.08
LIG1-205ENST00000593425 WDR7Q9Y4E6 1490 aa28.02■■■□□ 2.08
LIG1-205ENST00000593425 TEX14Q8IWB6 1497 aa27.99■■■□□ 2.07
LIG1-205ENST00000593425 CFAP43Q8NDM7 1665 aa27.91■■■□□ 2.06
LIG1-205ENST00000593425 ADGRL1O94910 1474 aa27.9■■■□□ 2.06
LIG1-205ENST00000593425 MAGI3Q5TCQ9 1506 aa27.84■■■□□ 2.05
LIG1-205ENST00000593425 CD109Q6YHK3 1445 aa27.84■■■□□ 2.05
LIG1-205ENST00000593425 KCNH8Q96L42 1107 aa27.81■■■□□ 2.04
LIG1-205ENST00000593425 SAMD9Q5K651 1589 aa27.8■■■□□ 2.04
LIG1-205ENST00000593425 P3H3Q8IVL6 736 aa27.79■■■□□ 2.04
LIG1-205ENST00000593425 ARID3CA6NKF2 412 aa27.75■■■□□ 2.03
LIG1-205ENST00000593425 CSRNP3Q8WYN3 585 aa27.75■■■□□ 2.03
LIG1-205ENST00000593425 ATP10BO94823 1461 aa27.75■■■□□ 2.03
LIG1-205ENST00000593425 RAPGEF6Q8TEU7 1601 aa27.7■■■□□ 2.03
LIG1-205ENST00000593425 ABCA9Q8IUA7 1624 aa27.67■■■□□ 2.02
LIG1-205ENST00000593425 FAM9AQ8IZU1 332 aaPredicted RBP27.64■■■□□ 2.02
LIG1-205ENST00000593425 KIF21BO75037 1637 aa27.63■■■□□ 2.01
LIG1-205ENST00000593425 EEA1Q15075 1411 aa27.63■■■□□ 2.01
LIG1-205ENST00000593425 ARAP3Q8WWN8 1544 aa27.62■■■□□ 2.01
LIG1-205ENST00000593425 NUP153P49790 1475 aaKnown RBP27.58■■■□□ 2.01
LIG1-205ENST00000593425 HECW2Q9P2P5 1572 aa27.57■■■□□ 2
LIG1-205ENST00000593425 FHOD3Q2V2M9 1422 aa27.57■■■□□ 2
LIG1-205ENST00000593425 RANGAP1P46060 587 aaPredicted RBP27.55■■■□□ 2
LIG1-205ENST00000593425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.51■■□□□ 1.99
LIG1-205ENST00000593425 HNRNPUL2Q1KMD3 747 aaKnown RBP27.51■■□□□ 1.99
LIG1-205ENST00000593425 NEO1Q92859 1461 aa27.49■■□□□ 1.99
LIG1-205ENST00000593425 PHLDB1Q86UU1 1377 aa27.48■■□□□ 1.99
LIG1-205ENST00000593425 FRMPD1Q5SYB0 1578 aa27.48■■□□□ 1.99
LIG1-205ENST00000593425 EFCAB5A4FU69 1503 aa27.46■■□□□ 1.99
LIG1-205ENST00000593425 RAPGEF3O95398 923 aa27.44■■□□□ 1.98
LIG1-205ENST00000593425 ADAMTSL3P82987 1691 aa27.39■■□□□ 1.97
LIG1-205ENST00000593425 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.36■■□□□ 1.97
LIG1-205ENST00000593425 TTC37Q6PGP7 1564 aa27.35■■□□□ 1.97
LIG1-205ENST00000593425 ILDR1Q86SU0 546 aaPredicted RBP27.35■■□□□ 1.97
LIG1-205ENST00000593425 RICTORQ6R327 1708 aa27.34■■□□□ 1.97
LIG1-205ENST00000593425 PLEKHD1A6NEE1 506 aa27.34■■□□□ 1.97
LIG1-205ENST00000593425 BCORL1Q5H9F3 1711 aa27.33■■□□□ 1.97
LIG1-205ENST00000593425 CDK13Q14004 1512 aaKnown RBP27.32■■□□□ 1.96
LIG1-205ENST00000593425 CFAP74Q9C0B2 1584 aa27.32■■□□□ 1.96
LIG1-205ENST00000593425 ARHGEF40Q8TER5 1519 aa27.31■■□□□ 1.96
LIG1-205ENST00000593425 PTPRMP28827 1452 aa27.3■■□□□ 1.96
LIG1-205ENST00000593425 AKNAQ7Z591 1439 aa27.29■■□□□ 1.96
LIG1-205ENST00000593425 FANCAO15360 1455 aa27.29■■□□□ 1.96
LIG1-205ENST00000593425 DENND4BO75064 1496 aaPredicted RBP27.29■■□□□ 1.96
LIG1-205ENST00000593425 MADDQ8WXG6 1647 aa27.28■■□□□ 1.96
LIG1-205ENST00000593425 EHMT2Q96KQ7 1210 aa27.26■■□□□ 1.95
LIG1-205ENST00000593425 ZMYM4Q5VZL5 1548 aa27.21■■□□□ 1.95
LIG1-205ENST00000593425 ARHGAP35Q9NRY4 1499 aa27.21■■□□□ 1.95
LIG1-205ENST00000593425 HECW1Q76N89 1606 aa27.21■■□□□ 1.95
LIG1-205ENST00000593425 ARID4BQ4LE39 1312 aaPredicted RBP27.2■■□□□ 1.95
LIG1-205ENST00000593425 UBTFP17480 764 aaKnown RBP27.19■■□□□ 1.94
LIG1-205ENST00000593425 SIGLEC1Q9BZZ2 1709 aa27.19■■□□□ 1.94
LIG1-205ENST00000593425 RIMS1Q86UR5 1692 aaKnown RBP27.18■■□□□ 1.94
LIG1-205ENST00000593425 FMN1Q68DA7 1419 aa27.16■■□□□ 1.94
LIG1-205ENST00000593425 ZFYVE16Q7Z3T8 1539 aa27.16■■□□□ 1.94
LIG1-205ENST00000593425 CHIC1Q5VXU3 224 aa27.15■■□□□ 1.94
LIG1-205ENST00000593425 YEATS2Q9ULM3 1422 aa27.15■■□□□ 1.94
LIG1-205ENST00000593425 PLCH2O75038 1416 aa27.14■■□□□ 1.93
LIG1-205ENST00000593425 MYO5CQ9NQX4 1742 aa27.13■■□□□ 1.93
LIG1-205ENST00000593425 KIF14Q15058 1648 aa27.12■■□□□ 1.93
LIG1-205ENST00000593425 LRRIQ1Q96JM4 1722 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms