RNA–Protein interactions for RNA: ENST00000593404.5

SMIM7-210, Transcript of small integral membrane protein 7, humanhuman

TSL 2

Gene SMIM7, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-210ENST00000593404 FBXO3Q9UK99 471 aa10□□□□□ -0.81
SMIM7-210ENST00000593404 KDM4FA0A1W2PPD8 638 aa9.98□□□□□ -0.81
SMIM7-210ENST00000593404 SOCS7O14512 581 aa9.97□□□□□ -0.81
SMIM7-210ENST00000593404 RBM42Q9BTD8 480 aaKnown RBP9.95□□□□□ -0.82
SMIM7-210ENST00000593404 LMTK3Q96Q04 1460 aa9.95□□□□□ -0.82
SMIM7-210ENST00000593404 ZCCHC6Q5VYS8 1495 aaKnown RBP9.94□□□□□ -0.82
SMIM7-210ENST00000593404 ILDR2Q71H61 639 aa9.93□□□□□ -0.82
SMIM7-210ENST00000593404 FBXO41Q8TF61 875 aa9.93□□□□□ -0.82
SMIM7-210ENST00000593404 POTEHQ6S545 545 aa9.87□□□□□ -0.83
SMIM7-210ENST00000593404 ERCC6L2Q5T890 1561 aa9.86□□□□□ -0.83
SMIM7-210ENST00000593404 AKT1S1Q96B36 256 aa9.86□□□□□ -0.83
SMIM7-210ENST00000593404 RSF1Q96T23 1441 aaPredicted RBP9.85□□□□□ -0.83
SMIM7-210ENST00000593404 RTN4Q9NQC3 1192 aaKnown RBP9.85□□□□□ -0.83
SMIM7-210ENST00000593404 SMARCA4P51532 1647 aa9.85□□□□□ -0.83
SMIM7-210ENST00000593404 CADPSQ9ULU8 1353 aa9.84□□□□□ -0.83
SMIM7-210ENST00000593404 VASPP50552 380 aaPredicted RBP9.83□□□□□ -0.84
SMIM7-210ENST00000593404 AMER1Q5JTC6 1135 aaPredicted RBP9.83□□□□□ -0.84
SMIM7-210ENST00000593404 STAG3Q9UJ98 1225 aa9.83□□□□□ -0.84
SMIM7-210ENST00000593404 BAZ1BQ9UIG0 1483 aaKnown RBP9.83□□□□□ -0.84
SMIM7-210ENST00000593404 CHD1O14646 1710 aa9.82□□□□□ -0.84
SMIM7-210ENST00000593404 ZNF608Q9ULD9 1512 aaPredicted RBP9.8□□□□□ -0.84
SMIM7-210ENST00000593404 HECW2Q9P2P5 1572 aa9.8□□□□□ -0.84
SMIM7-210ENST00000593404 CEP164Q9UPV0 1460 aa9.79□□□□□ -0.84
SMIM7-210ENST00000593404 KIF13AQ9H1H9 1805 aa9.76□□□□□ -0.85
SMIM7-210ENST00000593404 URB2Q14146 1524 aaKnown RBP9.76□□□□□ -0.85
SMIM7-210ENST00000593404 SPDYE1Q8NFV5 336 aaPredicted RBP9.75□□□□□ -0.85
SMIM7-210ENST00000593404 REM2Q8IYK8 340 aaPredicted RBP9.74□□□□□ -0.85
SMIM7-210ENST00000593404 PEG3Q9GZU2 1588 aa9.72□□□□□ -0.85
SMIM7-210ENST00000593404 FANCD2Q9BXW9 1451 aa9.72□□□□□ -0.85
SMIM7-210ENST00000593404 IFNLR1Q8IU57 520 aaPredicted RBP9.69□□□□□ -0.86
SMIM7-210ENST00000593404 MIER1Q8N108 512 aa9.68□□□□□ -0.86
SMIM7-210ENST00000593404 PLCD3Q8N3E9 789 aa9.68□□□□□ -0.86
SMIM7-210ENST00000593404 CLEC11AQ9Y240 323 aa9.68□□□□□ -0.86
SMIM7-210ENST00000593404 DISP3Q9P2K9 1392 aa9.67□□□□□ -0.86
SMIM7-210ENST00000593404 CLASP1Q7Z460 1538 aa9.66□□□□□ -0.86
SMIM7-210ENST00000593404 EIF4G3O43432 1585 aaKnown RBP9.66□□□□□ -0.86
SMIM7-210ENST00000593404 SYNJ2O15056 1496 aa9.66□□□□□ -0.86
SMIM7-210ENST00000593404 PLEKHG5O94827 1062 aa9.65□□□□□ -0.86
SMIM7-210ENST00000593404 PITPNM1O00562 1244 aa9.63□□□□□ -0.87
SMIM7-210ENST00000593404 PRR29P0C7W0 189 aa9.63□□□□□ -0.87
SMIM7-210ENST00000593404 KLHL34Q8N239 644 aa9.63□□□□□ -0.87
SMIM7-210ENST00000593404 IFT140Q96RY7 1462 aa9.63□□□□□ -0.87
SMIM7-210ENST00000593404 DAXXQ9UER7 740 aaPredicted RBP9.61□□□□□ -0.87
SMIM7-210ENST00000593404 GAPVD1Q14C86 1478 aa9.6□□□□□ -0.87
SMIM7-210ENST00000593404 ZBTB47Q9UFB7 747 aaPredicted RBP9.59□□□□□ -0.87
SMIM7-210ENST00000593404 ADGRL1O94910 1474 aa9.59□□□□□ -0.87
SMIM7-210ENST00000593404 SPOCK2Q92563 424 aa9.58□□□□□ -0.88
SMIM7-210ENST00000593404 AQRO60306 1485 aaKnown RBP eCLIP9.56□□□□□ -0.88
SMIM7-210ENST00000593404 KDM6BO15054 1643 aa9.55□□□□□ -0.88
SMIM7-210ENST00000593404 CFTRP13569 1480 aa9.53□□□□□ -0.88
SMIM7-210ENST00000593404 CREBZFQ9NS37 354 aa9.53□□□□□ -0.88
SMIM7-210ENST00000593404 TARBP1Q13395 1621 aaKnown RBP9.49□□□□□ -0.89
SMIM7-210ENST00000593404 SYNJ1O43426 1573 aa9.48□□□□□ -0.89
SMIM7-210ENST00000593404 SPATA31D1Q6ZQQ2 1576 aa9.48□□□□□ -0.89
SMIM7-210ENST00000593404 MROH2BQ7Z745 1585 aa9.48□□□□□ -0.89
SMIM7-210ENST00000593404 ABCC10Q5T3U5 1492 aa9.46□□□□□ -0.9
SMIM7-210ENST00000593404 MNX1P50219 401 aaPredicted RBP9.45□□□□□ -0.9
SMIM7-210ENST00000593404 FAM69CQ0P6D2 419 aa9.45□□□□□ -0.9
SMIM7-210ENST00000593404 CHRDL2Q6WN34 429 aa9.45□□□□□ -0.9
SMIM7-210ENST00000593404 TSPOAP1O95153 1857 aa9.45□□□□□ -0.9
SMIM7-210ENST00000593404 TOPBP1Q92547 1522 aa9.44□□□□□ -0.9
SMIM7-210ENST00000593404 FXR2P51116 673 aaKnown RBP eCLIP9.43□□□□□ -0.9
SMIM7-210ENST00000593404 PKD2Q13563 968 aa9.43□□□□□ -0.9
SMIM7-210ENST00000593404 DIP2BQ9P265 1576 aa9.41□□□□□ -0.9
SMIM7-210ENST00000593404 NPM1P06748 294 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMIM7-210ENST00000593404 PRKAR2AP13861 404 aaKnown RBP9.4□□□□□ -0.9
SMIM7-210ENST00000593404 NUBP1P53384 320 aa9.4□□□□□ -0.9
SMIM7-210ENST00000593404 CHADLQ6NUI6 762 aa9.4□□□□□ -0.9
SMIM7-210ENST00000593404 CIZ1Q9ULV3 898 aaPredicted RBP9.39□□□□□ -0.91
SMIM7-210ENST00000593404 SNAPC4Q5SXM2 1469 aa9.39□□□□□ -0.91
SMIM7-210ENST00000593404 PRDM2Q13029 1718 aa9.39□□□□□ -0.91
SMIM7-210ENST00000593404 CHMP7Q8WUX9 453 aaPredicted RBP9.38□□□□□ -0.91
SMIM7-210ENST00000593404 GSE1Q14687 1217 aa9.37□□□□□ -0.91
SMIM7-210ENST00000593404 PIP4P2Q8N4L2 257 aa9.37□□□□□ -0.91
SMIM7-210ENST00000593404 ECM2O94769 699 aaPredicted RBP9.36□□□□□ -0.91
SMIM7-210ENST00000593404 CERKQ8TCT0 537 aa9.36□□□□□ -0.91
SMIM7-210ENST00000593404 FARP1Q9Y4F1 1045 aaPredicted RBP9.36□□□□□ -0.91
SMIM7-210ENST00000593404 FAM212AQ96EL1 285 aa9.34□□□□□ -0.91
SMIM7-210ENST00000593404 TDRD9Q8NDG6 1382 aaKnown RBP9.34□□□□□ -0.91
SMIM7-210ENST00000593404 DCAF8Q5TAQ9 597 aa9.33□□□□□ -0.92
SMIM7-210ENST00000593404 WIZO95785 1651 aa9.32□□□□□ -0.92
SMIM7-210ENST00000593404 MAPKBP1O60336 1514 aa9.32□□□□□ -0.92
SMIM7-210ENST00000593404 RASEFQ8IZ41 740 aa9.31□□□□□ -0.92
SMIM7-210ENST00000593404 MAGI1Q96QZ7 1491 aaPredicted RBP9.31□□□□□ -0.92
SMIM7-210ENST00000593404 COL17A1Q9UMD9 1497 aaPredicted RBP9.31□□□□□ -0.92
SMIM7-210ENST00000593404 CEP170Q5SW79 1584 aa9.31□□□□□ -0.92
SMIM7-210ENST00000593404 PPRC1Q5VV67 1664 aaKnown RBP9.3□□□□□ -0.92
SMIM7-210ENST00000593404 ABCC8Q09428 1581 aa9.3□□□□□ -0.92
SMIM7-210ENST00000593404 DNMBPQ6XZF7 1577 aa9.3□□□□□ -0.92
SMIM7-210ENST00000593404 POLA1P09884 1462 aaPredicted RBP9.28□□□□□ -0.92
SMIM7-210ENST00000593404 RAD54L2Q9Y4B4 1467 aa9.28□□□□□ -0.92
SMIM7-210ENST00000593404 TOP2BQ02880 1626 aa9.27□□□□□ -0.92
SMIM7-210ENST00000593404 SHROOM2Q13796 1616 aa9.27□□□□□ -0.93
SMIM7-210ENST00000593404 RGL2O15211 777 aa9.25□□□□□ -0.93
SMIM7-210ENST00000593404 ARXQ96QS3 562 aa9.24□□□□□ -0.93
SMIM7-210ENST00000593404 TSPYL2Q9H2G4 693 aaPredicted RBP9.23□□□□□ -0.93
SMIM7-210ENST00000593404 CHRM1P11229 460 aaPredicted RBP9.22□□□□□ -0.93
SMIM7-210ENST00000593404 PELP1Q8IZL8 1130 aaKnown RBP9.22□□□□□ -0.93
SMIM7-210ENST00000593404 WDR97A6NE52 1622 aa9.22□□□□□ -0.93
SMIM7-210ENST00000593404 GRIN2BQ13224 1484 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms