RNA–Protein interactions for RNA: ENST00000593337.5

IRF3-205, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-205ENST00000593337 SHROOM2Q13796 1616 aa30.76■■■□□ 2.52
IRF3-205ENST00000593337 CSRNP3Q8WYN3 585 aa30.69■■■□□ 2.5
IRF3-205ENST00000593337 KIAA0586Q9BVV6 1533 aa30.68■■■□□ 2.5
IRF3-205ENST00000593337 CTTNBP2Q8WZ74 1663 aa30.65■■■□□ 2.5
IRF3-205ENST00000593337 KIF21BO75037 1637 aa30.61■■■□□ 2.49
IRF3-205ENST00000593337 IQGAP2Q13576 1575 aa30.6■■■□□ 2.49
IRF3-205ENST00000593337 ERCC6L2Q5T890 1561 aa30.59■■■□□ 2.49
IRF3-205ENST00000593337 FAM9AQ8IZU1 332 aaPredicted RBP30.59■■■□□ 2.49
IRF3-205ENST00000593337 ARAP1Q96P48 1450 aa30.56■■■□□ 2.48
IRF3-205ENST00000593337 JPH4Q96JJ6 628 aa30.51■■■□□ 2.47
IRF3-205ENST00000593337 PRG4Q92954 1404 aaPredicted RBP30.49■■■□□ 2.47
IRF3-205ENST00000593337 UGGT2Q9NYU1 1516 aa30.43■■■□□ 2.46
IRF3-205ENST00000593337 GOLGA3Q08378 1498 aa30.36■■■□□ 2.45
IRF3-205ENST00000593337 DISP1Q96F81 1524 aa30.35■■■□□ 2.45
IRF3-205ENST00000593337 KIAA0556O60303 1618 aa30.33■■■□□ 2.45
IRF3-205ENST00000593337 CYB5RLQ6IPT4 315 aa30.32■■■□□ 2.44
IRF3-205ENST00000593337 CARMIL2Q6F5E8 1435 aa30.29■■■□□ 2.44
IRF3-205ENST00000593337 SAMD9Q5K651 1589 aa30.22■■■□□ 2.43
IRF3-205ENST00000593337 TNIKQ9UKE5 1360 aa30.19■■■□□ 2.42
IRF3-205ENST00000593337 EHMT2Q96KQ7 1210 aa30.15■■■□□ 2.42
IRF3-205ENST00000593337 PTPRGP23470 1445 aa30.13■■■□□ 2.41
IRF3-205ENST00000593337 ADCY10Q96PN6 1610 aa30.11■■■□□ 2.41
IRF3-205ENST00000593337 UBTFP17480 764 aaKnown RBP30.11■■■□□ 2.41
IRF3-205ENST00000593337 EFCAB5A4FU69 1503 aa30.08■■■□□ 2.41
IRF3-205ENST00000593337 UHRF1BP1LA0JNW5 1464 aa29.99■■■□□ 2.39
IRF3-205ENST00000593337 ABCC2Q92887 1545 aa29.98■■■□□ 2.39
IRF3-205ENST00000593337 TTBK1Q5TCY1 1321 aaPredicted RBP29.97■■■□□ 2.39
IRF3-205ENST00000593337 UACAQ9BZF9 1416 aa29.97■■■□□ 2.39
IRF3-205ENST00000593337 ABCA8O94911 1581 aa29.97■■■□□ 2.39
IRF3-205ENST00000593337 RANGAP1P46060 587 aaPredicted RBP29.95■■■□□ 2.39
IRF3-205ENST00000593337 FHOD3Q2V2M9 1422 aa29.95■■■□□ 2.38
IRF3-205ENST00000593337 ARHGAP35Q9NRY4 1499 aa29.94■■■□□ 2.38
IRF3-205ENST00000593337 P3H3Q8IVL6 736 aa29.94■■■□□ 2.38
IRF3-205ENST00000593337 PLB1Q6P1J6 1458 aa29.93■■■□□ 2.38
IRF3-205ENST00000593337 RAPGEF6Q8TEU7 1601 aa29.86■■■□□ 2.37
IRF3-205ENST00000593337 MAPKBP1O60336 1514 aa29.86■■■□□ 2.37
IRF3-205ENST00000593337 KDM5BQ9UGL1 1544 aa29.85■■■□□ 2.37
IRF3-205ENST00000593337 ZCCHC11Q5TAX3 1644 aaKnown RBP29.84■■■□□ 2.37
IRF3-205ENST00000593337 CLIP1P30622 1438 aa29.79■■■□□ 2.36
IRF3-205ENST00000593337 LOC105371045A0A1W2PR82 267 aa29.78■■■□□ 2.36
IRF3-205ENST00000593337 KIF13AQ9H1H9 1805 aa29.74■■■□□ 2.35
IRF3-205ENST00000593337 NPM1P06748 294 aaKnown RBP eCLIP29.74■■■□□ 2.35
IRF3-205ENST00000593337 CEP162Q5TB80 1403 aa29.73■■■□□ 2.35
IRF3-205ENST00000593337 FMN1Q68DA7 1419 aa29.72■■■□□ 2.35
IRF3-205ENST00000593337 NUP153P49790 1475 aaKnown RBP29.72■■■□□ 2.35
IRF3-205ENST00000593337 DIP2BQ9P265 1576 aa29.67■■■□□ 2.34
IRF3-205ENST00000593337 ASXL2Q76L83 1435 aa29.66■■■□□ 2.34
IRF3-205ENST00000593337 HECW1Q76N89 1606 aa29.65■■■□□ 2.34
IRF3-205ENST00000593337 ATP10BO94823 1461 aa29.65■■■□□ 2.34
IRF3-205ENST00000593337 ABCC10Q5T3U5 1492 aa29.64■■■□□ 2.34
IRF3-205ENST00000593337 PCF11O94913 1555 aaKnown RBP29.63■■■□□ 2.33
IRF3-205ENST00000593337 LRRIQ1Q96JM4 1722 aa29.62■■■□□ 2.33
IRF3-205ENST00000593337 TRHP20396 242 aaPredicted RBP29.58■■■□□ 2.33
IRF3-205ENST00000593337 WDR7Q9Y4E6 1490 aa29.58■■■□□ 2.33
IRF3-205ENST00000593337 CASKIN1Q8WXD9 1431 aa29.54■■■□□ 2.32
IRF3-205ENST00000593337 CDK13Q14004 1512 aaKnown RBP29.54■■■□□ 2.32
IRF3-205ENST00000593337 GLI2P10070 1586 aa29.53■■■□□ 2.32
IRF3-205ENST00000593337 ARID3CA6NKF2 412 aa29.53■■■□□ 2.32
IRF3-205ENST00000593337 EPRSP07814 1512 aaKnown RBP29.52■■■□□ 2.32
IRF3-205ENST00000593337 FYCO1Q9BQS8 1478 aa29.52■■■□□ 2.32
IRF3-205ENST00000593337 MAP3K4Q9Y6R4 1608 aa29.45■■■□□ 2.3
IRF3-205ENST00000593337 FAM69CQ0P6D2 419 aa29.44■■■□□ 2.3
IRF3-205ENST00000593337 TSPOAP1O95153 1857 aa29.42■■■□□ 2.3
IRF3-205ENST00000593337 CCDC18Q5T9S5 1454 aa29.42■■■□□ 2.3
IRF3-205ENST00000593337 PPRC1Q5VV67 1664 aaKnown RBP29.4■■■□□ 2.3
IRF3-205ENST00000593337 CFAP43Q8NDM7 1665 aa29.4■■■□□ 2.3
IRF3-205ENST00000593337 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.38■■■□□ 2.29
IRF3-205ENST00000593337 HNRNPUL2Q1KMD3 747 aaKnown RBP29.38■■■□□ 2.29
IRF3-205ENST00000593337 ATP1B4Q9UN42 357 aaPredicted RBP29.38■■■□□ 2.29
IRF3-205ENST00000593337 ABCA9Q8IUA7 1624 aa29.37■■■□□ 2.29
IRF3-205ENST00000593337 VPS8Q8N3P4 1428 aa29.37■■■□□ 2.29
IRF3-205ENST00000593337 PLEKHD1A6NEE1 506 aa29.3■■■□□ 2.28
IRF3-205ENST00000593337 KCNH8Q96L42 1107 aa29.3■■■□□ 2.28
IRF3-205ENST00000593337 MAGI3Q5TCQ9 1506 aa29.29■■■□□ 2.28
IRF3-205ENST00000593337 TROQ12816 1431 aaPredicted RBP29.27■■■□□ 2.28
IRF3-205ENST00000593337 KIF14Q15058 1648 aa29.26■■■□□ 2.27
IRF3-205ENST00000593337 TTC37Q6PGP7 1564 aa29.26■■■□□ 2.27
IRF3-205ENST00000593337 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.25■■■□□ 2.273e-7■□□□□ 11.1
IRF3-205ENST00000593337 CD109Q6YHK3 1445 aa29.22■■■□□ 2.27
IRF3-205ENST00000593337 CDK11AQ9UQ88 783 aaPredicted RBP29.22■■■□□ 2.27
IRF3-205ENST00000593337 TIAM1Q13009 1591 aa29.19■■■□□ 2.26
IRF3-205ENST00000593337 TEX14Q8IWB6 1497 aa29.18■■■□□ 2.26
IRF3-205ENST00000593337 MYO5CQ9NQX4 1742 aa29.14■■■□□ 2.26
IRF3-205ENST00000593337 EHBP1L1Q8N3D4 1523 aa29.13■■■□□ 2.25
IRF3-205ENST00000593337 MAP3K1Q13233 1512 aa29.12■■■□□ 2.25
IRF3-205ENST00000593337 KDM6BO15054 1643 aa29.09■■■□□ 2.25
IRF3-205ENST00000593337 CDC42BPAQ5VT25 1732 aa29.06■■■□□ 2.24
IRF3-205ENST00000593337 ARAP3Q8WWN8 1544 aa29.06■■■□□ 2.24
IRF3-205ENST00000593337 MTUS2Q5JR59 1369 aa29.06■■■□□ 2.24
IRF3-205ENST00000593337 CFAP74Q9C0B2 1584 aa29.05■■■□□ 2.24
IRF3-205ENST00000593337 CDC42BPBQ9Y5S2 1711 aa29.05■■■□□ 2.24
IRF3-205ENST00000593337 PREX2Q70Z35 1606 aa29.05■■■□□ 2.24
IRF3-205ENST00000593337 NEO1Q92859 1461 aa29.03■■■□□ 2.24
IRF3-205ENST00000593337 PLCH2O75038 1416 aa29.02■■■□□ 2.24
IRF3-205ENST00000593337 LRRC9Q6ZRR7 1453 aa29.01■■■□□ 2.23
IRF3-205ENST00000593337 SUPT6HQ7KZ85 1726 aaKnown RBP29■■■□□ 2.23
IRF3-205ENST00000593337 COL17A1Q9UMD9 1497 aaPredicted RBP28.99■■■□□ 2.23
IRF3-205ENST00000593337 FANCAO15360 1455 aa28.98■■■□□ 2.23
IRF3-205ENST00000593337 PHLDB1Q86UU1 1377 aa28.95■■■□□ 2.22
IRF3-205ENST00000593337 ARHGAP5Q13017 1502 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms