RNA–Protein interactions for RNA: ENST00000593209.5

GHDC-212, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-212ENST00000593209 CHMP7Q8WUX9 453 aaPredicted RBP29.64■■■□□ 2.34
GHDC-212ENST00000593209 PPARGC1BQ86YN6 1023 aaKnown RBP29.58■■■□□ 2.33
GHDC-212ENST00000593209 FHAD1B1AJZ9 1412 aa29.58■■■□□ 2.33
GHDC-212ENST00000593209 OSCARQ8IYS5 282 aa29.57■■■□□ 2.32
GHDC-212ENST00000593209 VPS8Q8N3P4 1428 aa29.55■■■□□ 2.32
GHDC-212ENST00000593209 ARAP1Q96P48 1450 aa29.53■■■□□ 2.32
GHDC-212ENST00000593209 GRIN2AQ12879 1464 aa29.52■■■□□ 2.32
GHDC-212ENST00000593209 RANGAP1P46060 587 aaPredicted RBP29.43■■■□□ 2.3
GHDC-212ENST00000593209 DNAJC5Q9H3Z4 198 aa29.43■■■□□ 2.3
GHDC-212ENST00000593209 ARHGAP35Q9NRY4 1499 aa29.42■■■□□ 2.3
GHDC-212ENST00000593209 CEP170Q5SW79 1584 aa29.41■■■□□ 2.3
GHDC-212ENST00000593209 HRCP23327 699 aa29.4■■■□□ 2.3
GHDC-212ENST00000593209 CTTNBP2Q8WZ74 1663 aa29.39■■■□□ 2.3
GHDC-212ENST00000593209 CLASP1Q7Z460 1538 aa29.35■■■□□ 2.29
GHDC-212ENST00000593209 NUP160Q12769 1436 aa29.34■■■□□ 2.29
GHDC-212ENST00000593209 TTBK1Q5TCY1 1321 aaPredicted RBP29.25■■■□□ 2.27
GHDC-212ENST00000593209 KIAA0586Q9BVV6 1533 aa29.16■■■□□ 2.26
GHDC-212ENST00000593209 IQGAP2Q13576 1575 aa29.15■■■□□ 2.26
GHDC-212ENST00000593209 EFCAB5A4FU69 1503 aa29.14■■■□□ 2.26
GHDC-212ENST00000593209 ARHGEF11O15085 1522 aa29.13■■■□□ 2.25
GHDC-212ENST00000593209 RIMBP3CA6NJZ7 1639 aa29.13■■■□□ 2.25
GHDC-212ENST00000593209 RIMBP3BA6NNM3 1639 aa29.13■■■□□ 2.25
GHDC-212ENST00000593209 RIMBP3Q9UFD9 1639 aa29.13■■■□□ 2.25
GHDC-212ENST00000593209 SHROOM2Q13796 1616 aa29.1■■■□□ 2.25
GHDC-212ENST00000593209 ERCC6L2Q5T890 1561 aa29.09■■■□□ 2.25
GHDC-212ENST00000593209 JPH4Q96JJ6 628 aa29.08■■■□□ 2.25
GHDC-212ENST00000593209 SAMD9Q5K651 1589 aa29.08■■■□□ 2.25
GHDC-212ENST00000593209 PCF11O94913 1555 aaKnown RBP29.04■■■□□ 2.24
GHDC-212ENST00000593209 APLP2Q06481 763 aa29.03■■■□□ 2.24
GHDC-212ENST00000593209 PRG4Q92954 1404 aaPredicted RBP29.02■■■□□ 2.24
GHDC-212ENST00000593209 UGGT2Q9NYU1 1516 aa29.01■■■□□ 2.23
GHDC-212ENST00000593209 FHOD3Q2V2M9 1422 aa29■■■□□ 2.23
GHDC-212ENST00000593209 TIAM1Q13009 1591 aa28.98■■■□□ 2.23
GHDC-212ENST00000593209 CFAP43Q8NDM7 1665 aa28.98■■■□□ 2.23
GHDC-212ENST00000593209 MAP3K1Q13233 1512 aa28.97■■■□□ 2.23
GHDC-212ENST00000593209 P3H3Q8IVL6 736 aa28.97■■■□□ 2.23
GHDC-212ENST00000593209 KANK4Q5T7N3 995 aaPredicted RBP28.96■■■□□ 2.23
GHDC-212ENST00000593209 DISP1Q96F81 1524 aa28.92■■■□□ 2.22
GHDC-212ENST00000593209 CYB5RLQ6IPT4 315 aa28.9■■■□□ 2.22
GHDC-212ENST00000593209 FYCO1Q9BQS8 1478 aa28.87■■■□□ 2.21
GHDC-212ENST00000593209 KIAA0556O60303 1618 aa28.87■■■□□ 2.21
GHDC-212ENST00000593209 LRRIQ1Q96JM4 1722 aa28.85■■■□□ 2.21
GHDC-212ENST00000593209 CASKIN1Q8WXD9 1431 aa28.84■■■□□ 2.21
GHDC-212ENST00000593209 CARMIL2Q6F5E8 1435 aa28.81■■■□□ 2.2
GHDC-212ENST00000593209 FMN1Q68DA7 1419 aa28.79■■■□□ 2.2
GHDC-212ENST00000593209 LRRC9Q6ZRR7 1453 aa28.79■■■□□ 2.2
GHDC-212ENST00000593209 RRBP1Q9P2E9 1410 aaKnown RBP28.75■■■□□ 2.19
GHDC-212ENST00000593209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.69■■■□□ 2.18
GHDC-212ENST00000593209 ZEB1P37275 1124 aaPredicted RBP28.69■■■□□ 2.18
GHDC-212ENST00000593209 PTPRGP23470 1445 aa28.69■■■□□ 2.18
GHDC-212ENST00000593209 HNRNPUL2Q1KMD3 747 aaKnown RBP28.62■■■□□ 2.17
GHDC-212ENST00000593209 HECW1Q76N89 1606 aa28.57■■■□□ 2.16
GHDC-212ENST00000593209 PHLDB1Q86UU1 1377 aa28.57■■■□□ 2.16
GHDC-212ENST00000593209 CCNB3Q8WWL7 1395 aa28.56■■■□□ 2.16
GHDC-212ENST00000593209 ATP1B4Q9UN42 357 aaPredicted RBP28.56■■■□□ 2.16
GHDC-212ENST00000593209 ADCY10Q96PN6 1610 aa28.56■■■□□ 2.16
GHDC-212ENST00000593209 PLB1Q6P1J6 1458 aa28.55■■■□□ 2.16
GHDC-212ENST00000593209 CCER1Q8TC90 406 aaPredicted RBP28.54■■■□□ 2.16
GHDC-212ENST00000593209 RAPGEF6Q8TEU7 1601 aa28.53■■■□□ 2.16
GHDC-212ENST00000593209 ABCA8O94911 1581 aa28.5■■■□□ 2.15
GHDC-212ENST00000593209 UACAQ9BZF9 1416 aa28.5■■■□□ 2.15
GHDC-212ENST00000593209 MAGI3Q5TCQ9 1506 aa28.49■■■□□ 2.15
GHDC-212ENST00000593209 CCDC18Q5T9S5 1454 aa28.47■■■□□ 2.15
GHDC-212ENST00000593209 EHBP1L1Q8N3D4 1523 aa28.46■■■□□ 2.15
GHDC-212ENST00000593209 NUP153P49790 1475 aaKnown RBP28.45■■■□□ 2.14
GHDC-212ENST00000593209 ABCC2Q92887 1545 aa28.45■■■□□ 2.14
GHDC-212ENST00000593209 EPRSP07814 1512 aaKnown RBP28.43■■■□□ 2.14
GHDC-212ENST00000593209 SUPT6HQ7KZ85 1726 aaKnown RBP28.43■■■□□ 2.14
GHDC-212ENST00000593209 ARID3CA6NKF2 412 aa28.41■■■□□ 2.14
GHDC-212ENST00000593209 CDK13Q14004 1512 aaKnown RBP28.4■■■□□ 2.14
GHDC-212ENST00000593209 UHRF1BP1LA0JNW5 1464 aa28.4■■■□□ 2.14
GHDC-212ENST00000593209 MTUS2Q5JR59 1369 aa28.38■■■□□ 2.13
GHDC-212ENST00000593209 NPM1P06748 294 aaKnown RBP eCLIP28.36■■■□□ 2.13
GHDC-212ENST00000593209 NCOA2Q15596 1464 aa28.35■■■□□ 2.13
GHDC-212ENST00000593209 ZCCHC11Q5TAX3 1644 aaKnown RBP28.33■■■□□ 2.13
GHDC-212ENST00000593209 FGD6Q6ZV73 1430 aa28.3■■■□□ 2.12
GHDC-212ENST00000593209 ATP10BO94823 1461 aa28.3■■■□□ 2.12
GHDC-212ENST00000593209 KDM5BQ9UGL1 1544 aa28.29■■■□□ 2.12
GHDC-212ENST00000593209 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.27■■■□□ 2.12
GHDC-212ENST00000593209 MYOM3Q5VTT5 1437 aa28.25■■■□□ 2.11
GHDC-212ENST00000593209 MAPKBP1O60336 1514 aa28.22■■■□□ 2.11
GHDC-212ENST00000593209 TRHP20396 242 aaPredicted RBP28.21■■■□□ 2.11
GHDC-212ENST00000593209 ITGAEP38570 1179 aa28.21■■■□□ 2.11
GHDC-212ENST00000593209 ASXL2Q76L83 1435 aa28.2■■■□□ 2.1
GHDC-212ENST00000593209 DHX57Q6P158 1386 aaKnown RBP28.19■■■□□ 2.1
GHDC-212ENST00000593209 PTPN23Q9H3S7 1636 aa28.19■■■□□ 2.1
GHDC-212ENST00000593209 FAM50AQ14320 339 aaKnown RBP28.19■■■□□ 2.1
GHDC-212ENST00000593209 CDK11AQ9UQ88 783 aaPredicted RBP28.14■■■□□ 2.1
GHDC-212ENST00000593209 TCOF1Q13428 1488 aaKnown RBP28.12■■■□□ 2.09
GHDC-212ENST00000593209 RAB3GAP2Q9H2M9 1393 aa28.12■■■□□ 2.09
GHDC-212ENST00000593209 KIF13AQ9H1H9 1805 aa28.11■■■□□ 2.09
GHDC-212ENST00000593209 PLEKHD1A6NEE1 506 aa28.1■■■□□ 2.09
GHDC-212ENST00000593209 TROQ12816 1431 aaPredicted RBP28.1■■■□□ 2.09
GHDC-212ENST00000593209 SETD5Q9C0A6 1442 aa28.09■■■□□ 2.09
GHDC-212ENST00000593209 WDR7Q9Y4E6 1490 aa28.08■■■□□ 2.09
GHDC-212ENST00000593209 DIP2BQ9P265 1576 aa28.08■■■□□ 2.09
GHDC-212ENST00000593209 PTPRKQ15262 1439 aa28.08■■■□□ 2.09
GHDC-212ENST00000593209 KCNH8Q96L42 1107 aa28.07■■■□□ 2.08
GHDC-212ENST00000593209 ABCC10Q5T3U5 1492 aa28.07■■■□□ 2.08
GHDC-212ENST00000593209 FAM69CQ0P6D2 419 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms