RNA–Protein interactions for RNA: ENST00000593174.5

CCDC130-212, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,783 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-212ENST00000593174 GRIN2AQ12879 1464 aa26.79■■□□□ 1.88
CCDC130-212ENST00000593174 FBLN2P98095 1184 aa26.77■■□□□ 1.88
CCDC130-212ENST00000593174 HRCP23327 699 aa26.68■■□□□ 1.86
CCDC130-212ENST00000593174 CHD1O14646 1710 aa26.64■■□□□ 1.85
CCDC130-212ENST00000593174 ARHGAP35Q9NRY4 1499 aa26.63■■□□□ 1.85
CCDC130-212ENST00000593174 IQGAP2Q13576 1575 aa26.62■■□□□ 1.85
CCDC130-212ENST00000593174 CEP170Q5SW79 1584 aa26.62■■□□□ 1.85
CCDC130-212ENST00000593174 KIAA0586Q9BVV6 1533 aa26.61■■□□□ 1.85
CCDC130-212ENST00000593174 NUP160Q12769 1436 aa26.59■■□□□ 1.85
CCDC130-212ENST00000593174 ARAP1Q96P48 1450 aa26.58■■□□□ 1.85
CCDC130-212ENST00000593174 PCGF6Q9BYE7 350 aa26.57■■□□□ 1.84
CCDC130-212ENST00000593174 EFCAB5A4FU69 1503 aa26.56■■□□□ 1.84
CCDC130-212ENST00000593174 P3H3Q8IVL6 736 aa26.53■■□□□ 1.84
CCDC130-212ENST00000593174 VPS8Q8N3P4 1428 aa26.52■■□□□ 1.84
CCDC130-212ENST00000593174 SAMD9Q5K651 1589 aa26.5■■□□□ 1.83
CCDC130-212ENST00000593174 UGGT2Q9NYU1 1516 aa26.48■■□□□ 1.83
CCDC130-212ENST00000593174 FHOD3Q2V2M9 1422 aa26.46■■□□□ 1.83
CCDC130-212ENST00000593174 JPH4Q96JJ6 628 aa26.41■■□□□ 1.82
CCDC130-212ENST00000593174 TRIM26Q12899 539 aaPredicted RBP26.37■■□□□ 1.81
CCDC130-212ENST00000593174 DISP1Q96F81 1524 aa26.36■■□□□ 1.81
CCDC130-212ENST00000593174 KIAA0556O60303 1618 aa26.35■■□□□ 1.81
CCDC130-212ENST00000593174 FMN1Q68DA7 1419 aa26.32■■□□□ 1.8
CCDC130-212ENST00000593174 CLASP1Q7Z460 1538 aa26.31■■□□□ 1.8
CCDC130-212ENST00000593174 CARMIL2Q6F5E8 1435 aa26.31■■□□□ 1.8
CCDC130-212ENST00000593174 APLP2Q06481 763 aa26.3■■□□□ 1.8
CCDC130-212ENST00000593174 PPARGC1BQ86YN6 1023 aaKnown RBP26.3■■□□□ 1.8
CCDC130-212ENST00000593174 SHROOM2Q13796 1616 aa26.27■■□□□ 1.8
CCDC130-212ENST00000593174 PRG4Q92954 1404 aaPredicted RBP26.26■■□□□ 1.79
CCDC130-212ENST00000593174 PCF11O94913 1555 aaKnown RBP26.26■■□□□ 1.79
CCDC130-212ENST00000593174 CASKIN1Q8WXD9 1431 aa26.23■■□□□ 1.79
CCDC130-212ENST00000593174 OSCARQ8IYS5 282 aa26.23■■□□□ 1.79
CCDC130-212ENST00000593174 ATP1B4Q9UN42 357 aaPredicted RBP26.23■■□□□ 1.79
CCDC130-212ENST00000593174 TTBK1Q5TCY1 1321 aaPredicted RBP26.22■■□□□ 1.79
CCDC130-212ENST00000593174 FYCO1Q9BQS8 1478 aa26.21■■□□□ 1.79
CCDC130-212ENST00000593174 ERCC6L2Q5T890 1561 aa26.11■■□□□ 1.77
CCDC130-212ENST00000593174 MAP3K1Q13233 1512 aa26.11■■□□□ 1.77
CCDC130-212ENST00000593174 TIAM1Q13009 1591 aa26.1■■□□□ 1.77
CCDC130-212ENST00000593174 HECW1Q76N89 1606 aa26.08■■□□□ 1.77
CCDC130-212ENST00000593174 KANK4Q5T7N3 995 aaPredicted RBP26.07■■□□□ 1.76
CCDC130-212ENST00000593174 PTPRGP23470 1445 aa26.07■■□□□ 1.76
CCDC130-212ENST00000593174 RAPGEF6Q8TEU7 1601 aa26.07■■□□□ 1.76
CCDC130-212ENST00000593174 CFAP43Q8NDM7 1665 aa26.07■■□□□ 1.76
CCDC130-212ENST00000593174 LRRIQ1Q96JM4 1722 aa26.07■■□□□ 1.76
CCDC130-212ENST00000593174 DNAJC5Q9H3Z4 198 aa26.05■■□□□ 1.76
CCDC130-212ENST00000593174 PLB1Q6P1J6 1458 aa26.03■■□□□ 1.76
CCDC130-212ENST00000593174 CCDC18Q5T9S5 1454 aa26■■□□□ 1.75
CCDC130-212ENST00000593174 ABCA8O94911 1581 aa25.99■■□□□ 1.75
CCDC130-212ENST00000593174 EPRSP07814 1512 aaKnown RBP25.99■■□□□ 1.75
CCDC130-212ENST00000593174 LRRC9Q6ZRR7 1453 aa25.99■■□□□ 1.75
CCDC130-212ENST00000593174 NUP153P49790 1475 aaKnown RBP25.98■■□□□ 1.75
CCDC130-212ENST00000593174 ARID3CA6NKF2 412 aa25.97■■□□□ 1.75
CCDC130-212ENST00000593174 ZEB1P37275 1124 aaPredicted RBP25.95■■□□□ 1.75
CCDC130-212ENST00000593174 CDK13Q14004 1512 aaKnown RBP25.94■■□□□ 1.74
CCDC130-212ENST00000593174 UACAQ9BZF9 1416 aa25.91■■□□□ 1.74
CCDC130-212ENST00000593174 MTUS2Q5JR59 1369 aa25.89■■□□□ 1.74
CCDC130-212ENST00000593174 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.88■■□□□ 1.73
CCDC130-212ENST00000593174 HNRNPUL2Q1KMD3 747 aaKnown RBP25.88■■□□□ 1.73
CCDC130-212ENST00000593174 MAGI3Q5TCQ9 1506 aa25.84■■□□□ 1.73
CCDC130-212ENST00000593174 EHBP1L1Q8N3D4 1523 aa25.83■■□□□ 1.73
CCDC130-212ENST00000593174 ABCC2Q92887 1545 aa25.83■■□□□ 1.73
CCDC130-212ENST00000593174 ATP10BO94823 1461 aa25.82■■□□□ 1.72
CCDC130-212ENST00000593174 CDK11AQ9UQ88 783 aaPredicted RBP25.82■■□□□ 1.72
CCDC130-212ENST00000593174 UHRF1BP1LA0JNW5 1464 aa25.78■■□□□ 1.72
CCDC130-212ENST00000593174 SUPT6HQ7KZ85 1726 aaKnown RBP25.77■■□□□ 1.72
CCDC130-212ENST00000593174 ARHGEF11O15085 1522 aa25.77■■□□□ 1.72
CCDC130-212ENST00000593174 PHLDB1Q86UU1 1377 aa25.73■■□□□ 1.71
CCDC130-212ENST00000593174 NCOA2Q15596 1464 aa25.72■■□□□ 1.71
CCDC130-212ENST00000593174 PLEKHD1A6NEE1 506 aa25.72■■□□□ 1.71
CCDC130-212ENST00000593174 TROQ12816 1431 aaPredicted RBP25.71■■□□□ 1.71
CCDC130-212ENST00000593174 ADCY10Q96PN6 1610 aa25.71■■□□□ 1.71
CCDC130-212ENST00000593174 RIMBP3CA6NJZ7 1639 aa25.68■■□□□ 1.7
CCDC130-212ENST00000593174 RIMBP3BA6NNM3 1639 aa25.68■■□□□ 1.7
CCDC130-212ENST00000593174 RIMBP3Q9UFD9 1639 aa25.68■■□□□ 1.7
CCDC130-212ENST00000593174 KDM5BQ9UGL1 1544 aa25.67■■□□□ 1.7
CCDC130-212ENST00000593174 ZCCHC11Q5TAX3 1644 aaKnown RBP25.67■■□□□ 1.7
CCDC130-212ENST00000593174 RRBP1Q9P2E9 1410 aaKnown RBP25.67■■□□□ 1.7
CCDC130-212ENST00000593174 CCNB3Q8WWL7 1395 aa25.63■■□□□ 1.69
CCDC130-212ENST00000593174 MYOM3Q5VTT5 1437 aa25.6■■□□□ 1.69
CCDC130-212ENST00000593174 KIF14Q15058 1648 aa25.6■■□□□ 1.69
CCDC130-212ENST00000593174 FGD6Q6ZV73 1430 aa25.57■■□□□ 1.68
CCDC130-212ENST00000593174 CYB5RLQ6IPT4 315 aa25.56■■□□□ 1.68
CCDC130-212ENST00000593174 NPM1P06748 294 aaKnown RBP eCLIP25.54■■□□□ 1.68
CCDC130-212ENST00000593174 FAM50AQ14320 339 aaKnown RBP25.54■■□□□ 1.68
CCDC130-212ENST00000593174 ABCC10Q5T3U5 1492 aa25.49■■□□□ 1.67
CCDC130-212ENST00000593174 KCNH8Q96L42 1107 aa25.49■■□□□ 1.67
CCDC130-212ENST00000593174 MIA2Q96PC5 1412 aa25.48■■□□□ 1.67
CCDC130-212ENST00000593174 PTPN23Q9H3S7 1636 aa25.47■■□□□ 1.67
CCDC130-212ENST00000593174 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.47■■□□□ 1.67
CCDC130-212ENST00000593174 ITSN2Q9NZM3 1697 aa25.47■■□□□ 1.67
CCDC130-212ENST00000593174 GPATCH8Q9UKJ3 1502 aaKnown RBP25.46■■□□□ 1.67
CCDC130-212ENST00000593174 ITGAEP38570 1179 aa25.45■■□□□ 1.66
CCDC130-212ENST00000593174 WDR7Q9Y4E6 1490 aa25.45■■□□□ 1.66
CCDC130-212ENST00000593174 ASXL2Q76L83 1435 aa25.44■■□□□ 1.66
CCDC130-212ENST00000593174 CDC42BPAQ5VT25 1732 aa25.44■■□□□ 1.66
CCDC130-212ENST00000593174 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.42■■□□□ 1.66
CCDC130-212ENST00000593174 TCOF1Q13428 1488 aaKnown RBP25.42■■□□□ 1.66
CCDC130-212ENST00000593174 CFDP1Q9UEE9 299 aaPredicted RBP25.41■■□□□ 1.66
CCDC130-212ENST00000593174 TTC37Q6PGP7 1564 aa25.4■■□□□ 1.66
CCDC130-212ENST00000593174 ZNF644Q9H582 1327 aaPredicted RBP25.35■■□□□ 1.65
CCDC130-212ENST00000593174 PREX2Q70Z35 1606 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms