RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 CUL7Q14999 1698 aa31.13■■■□□ 2.57
CIRBP-243ENST00000593128 IGF1RP08069 1367 aa31.12■■■□□ 2.57
CIRBP-243ENST00000593128 KIAA0586Q9BVV6 1533 aa30.98■■■□□ 2.55
CIRBP-243ENST00000593128 CARMIL1Q5VZK9 1371 aa30.96■■■□□ 2.55
CIRBP-243ENST00000593128 NPM1P06748 294 aaKnown RBP eCLIP30.9■■■□□ 2.54
CIRBP-243ENST00000593128 TTBK1Q5TCY1 1321 aaPredicted RBP30.89■■■□□ 2.54
CIRBP-243ENST00000593128 KIF13AQ9H1H9 1805 aa30.86■■■□□ 2.53
CIRBP-243ENST00000593128 ADCY10Q96PN6 1610 aa30.84■■■□□ 2.53
CIRBP-243ENST00000593128 IQGAP2Q13576 1575 aa30.77■■■□□ 2.52
CIRBP-243ENST00000593128 FAM69CQ0P6D2 419 aa30.75■■■□□ 2.51
CIRBP-243ENST00000593128 PTPRGP23470 1445 aa30.73■■■□□ 2.51
CIRBP-243ENST00000593128 CARMIL2Q6F5E8 1435 aa30.73■■■□□ 2.51
CIRBP-243ENST00000593128 MAPKBP1O60336 1514 aa30.72■■■□□ 2.51
CIRBP-243ENST00000593128 RAPGEF2Q9Y4G8 1499 aa30.7■■■□□ 2.5
CIRBP-243ENST00000593128 ABCC10Q5T3U5 1492 aa30.68■■■□□ 2.5
CIRBP-243ENST00000593128 TNIKQ9UKE5 1360 aa30.66■■■□□ 2.5
CIRBP-243ENST00000593128 AEBP2Q6ZN18 517 aaPredicted RBP30.65■■■□□ 2.5
CIRBP-243ENST00000593128 DIP2BQ9P265 1576 aa30.65■■■□□ 2.5
CIRBP-243ENST00000593128 TSPOAP1O95153 1857 aa30.58■■■□□ 2.49
CIRBP-243ENST00000593128 DISP1Q96F81 1524 aa30.57■■■□□ 2.48
CIRBP-243ENST00000593128 ABCC2Q92887 1545 aa30.52■■■□□ 2.48
CIRBP-243ENST00000593128 UGGT2Q9NYU1 1516 aa30.52■■■□□ 2.48
CIRBP-243ENST00000593128 CTTNBP2Q8WZ74 1663 aa30.52■■■□□ 2.48
CIRBP-243ENST00000593128 UACAQ9BZF9 1416 aa30.48■■■□□ 2.47
CIRBP-243ENST00000593128 KIAA0556O60303 1618 aa30.48■■■□□ 2.47
CIRBP-243ENST00000593128 ASXL2Q76L83 1435 aa30.44■■■□□ 2.46
CIRBP-243ENST00000593128 UHRF1BP1LA0JNW5 1464 aa30.44■■■□□ 2.46
CIRBP-243ENST00000593128 KDM6BO15054 1643 aa30.42■■■□□ 2.46
CIRBP-243ENST00000593128 PLB1Q6P1J6 1458 aa30.38■■■□□ 2.45
CIRBP-243ENST00000593128 PRXQ9BXM0 1461 aa30.35■■■□□ 2.45
CIRBP-243ENST00000593128 ZCCHC11Q5TAX3 1644 aaKnown RBP30.35■■■□□ 2.45
CIRBP-243ENST00000593128 GOLGA3Q08378 1498 aa30.32■■■□□ 2.44
CIRBP-243ENST00000593128 KDM5BQ9UGL1 1544 aa30.31■■■□□ 2.44
CIRBP-243ENST00000593128 GLI2P10070 1586 aa30.28■■■□□ 2.44
CIRBP-243ENST00000593128 PPRC1Q5VV67 1664 aaKnown RBP30.24■■■□□ 2.43
CIRBP-243ENST00000593128 EPRSP07814 1512 aaKnown RBP30.23■■■□□ 2.43
CIRBP-243ENST00000593128 P3H3Q8IVL6 736 aa30.21■■■□□ 2.43
CIRBP-243ENST00000593128 CSRNP3Q8WYN3 585 aa30.21■■■□□ 2.43
CIRBP-243ENST00000593128 MAP3K4Q9Y6R4 1608 aa30.17■■■□□ 2.42
CIRBP-243ENST00000593128 ABCA8O94911 1581 aa30.16■■■□□ 2.42
CIRBP-243ENST00000593128 WDR7Q9Y4E6 1490 aa30.15■■■□□ 2.42
CIRBP-243ENST00000593128 FAM9AQ8IZU1 332 aaPredicted RBP30.14■■■□□ 2.42
CIRBP-243ENST00000593128 ARID3CA6NKF2 412 aa30.13■■■□□ 2.41
CIRBP-243ENST00000593128 RANGAP1P46060 587 aaPredicted RBP30.12■■■□□ 2.41
CIRBP-243ENST00000593128 KCNH8Q96L42 1107 aa30.11■■■□□ 2.41
CIRBP-243ENST00000593128 TEX14Q8IWB6 1497 aa30.08■■■□□ 2.41
CIRBP-243ENST00000593128 EEA1Q15075 1411 aa30.05■■■□□ 2.4
CIRBP-243ENST00000593128 SAMD9Q5K651 1589 aa30■■■□□ 2.39
CIRBP-243ENST00000593128 COL17A1Q9UMD9 1497 aaPredicted RBP29.99■■■□□ 2.39
CIRBP-243ENST00000593128 KDM4FA0A1W2PPD8 638 aa29.99■■■□□ 2.39
CIRBP-243ENST00000593128 CFAP43Q8NDM7 1665 aa29.98■■■□□ 2.39
CIRBP-243ENST00000593128 CD109Q6YHK3 1445 aa29.97■■■□□ 2.39
CIRBP-243ENST00000593128 EHMT2Q96KQ7 1210 aa29.93■■■□□ 2.38
CIRBP-243ENST00000593128 RAPGEF6Q8TEU7 1601 aa29.93■■■□□ 2.38
CIRBP-243ENST00000593128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.92■■■□□ 2.38
CIRBP-243ENST00000593128 HNRNPUL2Q1KMD3 747 aaKnown RBP29.92■■■□□ 2.38
CIRBP-243ENST00000593128 ATP10BO94823 1461 aa29.92■■■□□ 2.38
CIRBP-243ENST00000593128 FHOD3Q2V2M9 1422 aa29.88■■■□□ 2.37
CIRBP-243ENST00000593128 MAGI3Q5TCQ9 1506 aa29.87■■■□□ 2.37
CIRBP-243ENST00000593128 KIF21BO75037 1637 aa29.85■■■□□ 2.37
CIRBP-243ENST00000593128 ADGRL1O94910 1474 aa29.84■■■□□ 2.37
CIRBP-243ENST00000593128 NUP153P49790 1475 aaKnown RBP29.76■■■□□ 2.35
CIRBP-243ENST00000593128 CHIC1Q5VXU3 224 aa29.75■■■□□ 2.35
CIRBP-243ENST00000593128 ABCA9Q8IUA7 1624 aa29.74■■■□□ 2.35
CIRBP-243ENST00000593128 UBTFP17480 764 aaKnown RBP29.74■■■□□ 2.35
CIRBP-243ENST00000593128 EFCAB5A4FU69 1503 aa29.73■■■□□ 2.35
CIRBP-243ENST00000593128 ARAP3Q8WWN8 1544 aa29.63■■■□□ 2.33
CIRBP-243ENST00000593128 PLEKHD1A6NEE1 506 aa29.63■■■□□ 2.33
CIRBP-243ENST00000593128 ATP1B4Q9UN42 357 aaPredicted RBP29.62■■■□□ 2.33
CIRBP-243ENST00000593128 RAPGEF3O95398 923 aa29.57■■■□□ 2.32
CIRBP-243ENST00000593128 CDK13Q14004 1512 aaKnown RBP29.55■■■□□ 2.32
CIRBP-243ENST00000593128 NEO1Q92859 1461 aa29.55■■■□□ 2.32
CIRBP-243ENST00000593128 PHLDB1Q86UU1 1377 aa29.55■■■□□ 2.32
CIRBP-243ENST00000593128 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.5■■■□□ 2.31
CIRBP-243ENST00000593128 ARHGAP35Q9NRY4 1499 aa29.48■■■□□ 2.31
CIRBP-243ENST00000593128 TTC37Q6PGP7 1564 aa29.48■■■□□ 2.31
CIRBP-243ENST00000593128 FMN1Q68DA7 1419 aa29.47■■■□□ 2.31
CIRBP-243ENST00000593128 HECW1Q76N89 1606 aa29.46■■■□□ 2.31
CIRBP-243ENST00000593128 FRMPD1Q5SYB0 1578 aa29.46■■■□□ 2.31
CIRBP-243ENST00000593128 CFAP74Q9C0B2 1584 aa29.44■■■□□ 2.3
CIRBP-243ENST00000593128 FANCAO15360 1455 aa29.44■■■□□ 2.3
CIRBP-243ENST00000593128 AKNAQ7Z591 1439 aa29.42■■■□□ 2.3
CIRBP-243ENST00000593128 ARID4BQ4LE39 1312 aaPredicted RBP29.41■■■□□ 2.3
CIRBP-243ENST00000593128 DENND4BO75064 1496 aaPredicted RBP29.4■■■□□ 2.3
CIRBP-243ENST00000593128 HECW2Q9P2P5 1572 aa29.39■■■□□ 2.3
CIRBP-243ENST00000593128 RICTORQ6R327 1708 aa29.37■■■□□ 2.29
CIRBP-243ENST00000593128 CDK11AQ9UQ88 783 aaPredicted RBP29.34■■■□□ 2.29
CIRBP-243ENST00000593128 ARHGEF40Q8TER5 1519 aa29.3■■■□□ 2.28
CIRBP-243ENST00000593128 LRRIQ1Q96JM4 1722 aa29.3■■■□□ 2.28
CIRBP-243ENST00000593128 MYO5CQ9NQX4 1742 aa29.3■■■□□ 2.28
CIRBP-243ENST00000593128 ADAMTSL3P82987 1691 aa29.29■■■□□ 2.28
CIRBP-243ENST00000593128 KIF14Q15058 1648 aa29.29■■■□□ 2.28
CIRBP-243ENST00000593128 BCORL1Q5H9F3 1711 aa29.28■■■□□ 2.28
CIRBP-243ENST00000593128 PLCH2O75038 1416 aa29.27■■■□□ 2.28
CIRBP-243ENST00000593128 CLIP1P30622 1438 aa29.24■■■□□ 2.27
CIRBP-243ENST00000593128 SCAPERQ9BY12 1400 aa29.24■■■□□ 2.27
CIRBP-243ENST00000593128 MADDQ8WXG6 1647 aa29.23■■■□□ 2.27
CIRBP-243ENST00000593128 PTPRMP28827 1452 aa29.23■■■□□ 2.27
CIRBP-243ENST00000593128 PCF11O94913 1555 aaKnown RBP29.23■■■□□ 2.27
CIRBP-243ENST00000593128 ZFYVE16Q7Z3T8 1539 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms