RNA–Protein interactions for RNA: ENST00000593101.5

PRKCSH-219, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-219ENST00000593101 CEP170Q5SW79 1584 aa25.16■■□□□ 1.62
PRKCSH-219ENST00000593101 KIAA0586Q9BVV6 1533 aa25.12■■□□□ 1.61
PRKCSH-219ENST00000593101 TNIKQ9UKE5 1360 aa25.08■■□□□ 1.61
PRKCSH-219ENST00000593101 CTTNBP2Q8WZ74 1663 aa25.08■■□□□ 1.61
PRKCSH-219ENST00000593101 RANGAP1P46060 587 aaPredicted RBP25.06■■□□□ 1.6
PRKCSH-219ENST00000593101 JPH4Q96JJ6 628 aa25.05■■□□□ 1.6
PRKCSH-219ENST00000593101 IQGAP2Q13576 1575 aa25.03■■□□□ 1.6
PRKCSH-219ENST00000593101 CLASP1Q7Z460 1538 aa25.02■■□□□ 1.6
PRKCSH-219ENST00000593101 UGGT2Q9NYU1 1516 aa24.91■■□□□ 1.58
PRKCSH-219ENST00000593101 PRG4Q92954 1404 aaPredicted RBP24.9■■□□□ 1.58
PRKCSH-219ENST00000593101 SHROOM2Q13796 1616 aa24.89■■□□□ 1.57
PRKCSH-219ENST00000593101 P3H3Q8IVL6 736 aa24.88■■□□□ 1.57
PRKCSH-219ENST00000593101 CARMIL2Q6F5E8 1435 aa24.87■■□□□ 1.57
PRKCSH-219ENST00000593101 CEP162Q5TB80 1403 aa24.86■■□□□ 1.57
PRKCSH-219ENST00000593101 CLIP1P30622 1438 aa24.86■■□□□ 1.57
PRKCSH-219ENST00000593101 DISP1Q96F81 1524 aa24.81■■□□□ 1.56
PRKCSH-219ENST00000593101 EFCAB5A4FU69 1503 aa24.8■■□□□ 1.56
PRKCSH-219ENST00000593101 ARHGAP35Q9NRY4 1499 aa24.78■■□□□ 1.56
PRKCSH-219ENST00000593101 TTBK1Q5TCY1 1321 aaPredicted RBP24.78■■□□□ 1.56
PRKCSH-219ENST00000593101 SAMD9Q5K651 1589 aa24.77■■□□□ 1.56
PRKCSH-219ENST00000593101 KIAA0556O60303 1618 aa24.77■■□□□ 1.56
PRKCSH-219ENST00000593101 ERCC6L2Q5T890 1561 aa24.76■■□□□ 1.55
PRKCSH-219ENST00000593101 DNAJC5Q9H3Z4 198 aa24.73■■□□□ 1.55
PRKCSH-219ENST00000593101 ARHGEF11O15085 1522 aa24.72■■□□□ 1.55
PRKCSH-219ENST00000593101 FHOD3Q2V2M9 1422 aa24.72■■□□□ 1.55
PRKCSH-219ENST00000593101 PTPRGP23470 1445 aa24.69■■□□□ 1.54
PRKCSH-219ENST00000593101 RIMBP3CA6NJZ7 1639 aa24.67■■□□□ 1.54
PRKCSH-219ENST00000593101 RIMBP3BA6NNM3 1639 aa24.67■■□□□ 1.54
PRKCSH-219ENST00000593101 RIMBP3Q9UFD9 1639 aa24.67■■□□□ 1.54
PRKCSH-219ENST00000593101 ARAP1Q96P48 1450 aa24.66■■□□□ 1.54
PRKCSH-219ENST00000593101 FMN1Q68DA7 1419 aa24.61■■□□□ 1.53
PRKCSH-219ENST00000593101 CYB5RLQ6IPT4 315 aa24.6■■□□□ 1.53
PRKCSH-219ENST00000593101 ATP1B4Q9UN42 357 aaPredicted RBP24.57■■□□□ 1.52
PRKCSH-219ENST00000593101 UACAQ9BZF9 1416 aa24.52■■□□□ 1.52
PRKCSH-219ENST00000593101 VPS8Q8N3P4 1428 aa24.52■■□□□ 1.52
PRKCSH-219ENST00000593101 PLB1Q6P1J6 1458 aa24.51■■□□□ 1.51
PRKCSH-219ENST00000593101 RAPGEF6Q8TEU7 1601 aa24.46■■□□□ 1.51
PRKCSH-219ENST00000593101 ABCA8O94911 1581 aa24.46■■□□□ 1.51
PRKCSH-219ENST00000593101 CASKIN1Q8WXD9 1431 aa24.46■■□□□ 1.51
PRKCSH-219ENST00000593101 ARID3CA6NKF2 412 aa24.43■■□□□ 1.5
PRKCSH-219ENST00000593101 NPM1P06748 294 aaKnown RBP eCLIP24.42■■□□□ 1.5
PRKCSH-219ENST00000593101 UHRF1BP1LA0JNW5 1464 aa24.42■■□□□ 1.5
PRKCSH-219ENST00000593101 PCF11O94913 1555 aaKnown RBP24.42■■□□□ 1.5
PRKCSH-219ENST00000593101 ABCC2Q92887 1545 aa24.41■■□□□ 1.5
PRKCSH-219ENST00000593101 FYCO1Q9BQS8 1478 aa24.41■■□□□ 1.5
PRKCSH-219ENST00000593101 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.41■■□□□ 1.5
PRKCSH-219ENST00000593101 HNRNPUL2Q1KMD3 747 aaKnown RBP24.41■■□□□ 1.5
PRKCSH-219ENST00000593101 APLP2Q06481 763 aa24.4■■□□□ 1.5
PRKCSH-219ENST00000593101 HECW1Q76N89 1606 aa24.39■■□□□ 1.49
PRKCSH-219ENST00000593101 ADCY10Q96PN6 1610 aa24.38■■□□□ 1.49
PRKCSH-219ENST00000593101 NUP153P49790 1475 aaKnown RBP24.38■■□□□ 1.49
PRKCSH-219ENST00000593101 ATP10BO94823 1461 aa24.32■■□□□ 1.48
PRKCSH-219ENST00000593101 EPRSP07814 1512 aaKnown RBP24.32■■□□□ 1.48
PRKCSH-219ENST00000593101 CCDC18Q5T9S5 1454 aa24.3■■□□□ 1.48
PRKCSH-219ENST00000593101 KDM5BQ9UGL1 1544 aa24.3■■□□□ 1.48
PRKCSH-219ENST00000593101 CDK11AQ9UQ88 783 aaPredicted RBP24.29■■□□□ 1.48
PRKCSH-219ENST00000593101 CDK13Q14004 1512 aaKnown RBP24.27■■□□□ 1.48
PRKCSH-219ENST00000593101 ZCCHC11Q5TAX3 1644 aaKnown RBP24.26■■□□□ 1.47
PRKCSH-219ENST00000593101 PLEKHD1A6NEE1 506 aa24.26■■□□□ 1.47
PRKCSH-219ENST00000593101 LRRIQ1Q96JM4 1722 aa24.26■■□□□ 1.47
PRKCSH-219ENST00000593101 MAP3K1Q13233 1512 aa24.21■■□□□ 1.47
PRKCSH-219ENST00000593101 TIAM1Q13009 1591 aa24.2■■□□□ 1.47
PRKCSH-219ENST00000593101 KANK4Q5T7N3 995 aaPredicted RBP24.17■■□□□ 1.46
PRKCSH-219ENST00000593101 KCNH8Q96L42 1107 aa24.17■■□□□ 1.46
PRKCSH-219ENST00000593101 MTUS2Q5JR59 1369 aa24.16■■□□□ 1.46
PRKCSH-219ENST00000593101 CFAP43Q8NDM7 1665 aa24.16■■□□□ 1.46
PRKCSH-219ENST00000593101 ASXL2Q76L83 1435 aa24.16■■□□□ 1.46
PRKCSH-219ENST00000593101 PPARGC1BQ86YN6 1023 aaKnown RBP24.15■■□□□ 1.46
PRKCSH-219ENST00000593101 LRRC9Q6ZRR7 1453 aa24.12■■□□□ 1.45
PRKCSH-219ENST00000593101 TROQ12816 1431 aaPredicted RBP24.1■■□□□ 1.45
PRKCSH-219ENST00000593101 MAPKBP1O60336 1514 aa24.1■■□□□ 1.45
PRKCSH-219ENST00000593101 WDR7Q9Y4E6 1490 aa24.1■■□□□ 1.45
PRKCSH-219ENST00000593101 MAGI3Q5TCQ9 1506 aa24.09■■□□□ 1.45
PRKCSH-219ENST00000593101 EHBP1L1Q8N3D4 1523 aa24.05■■□□□ 1.44
PRKCSH-219ENST00000593101 FAM69CQ0P6D2 419 aa24■■□□□ 1.43
PRKCSH-219ENST00000593101 KIF14Q15058 1648 aa23.99■■□□□ 1.43
PRKCSH-219ENST00000593101 SUPT6HQ7KZ85 1726 aaKnown RBP23.98■■□□□ 1.43
PRKCSH-219ENST00000593101 ABCC10Q5T3U5 1492 aa23.96■■□□□ 1.43
PRKCSH-219ENST00000593101 NCOA2Q15596 1464 aa23.95■■□□□ 1.42
PRKCSH-219ENST00000593101 TRHP20396 242 aaPredicted RBP23.95■■□□□ 1.42
PRKCSH-219ENST00000593101 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.93■■□□□ 1.422e-23■□□□□ 8.5
PRKCSH-219ENST00000593101 CCNB3Q8WWL7 1395 aa23.92■■□□□ 1.42
PRKCSH-219ENST00000593101 GLI2P10070 1586 aa23.9■■□□□ 1.42
PRKCSH-219ENST00000593101 DIP2BQ9P265 1576 aa23.9■■□□□ 1.42
PRKCSH-219ENST00000593101 ABCA9Q8IUA7 1624 aa23.88■■□□□ 1.41
PRKCSH-219ENST00000593101 CD109Q6YHK3 1445 aa23.87■■□□□ 1.41
PRKCSH-219ENST00000593101 TTC37Q6PGP7 1564 aa23.86■■□□□ 1.41
PRKCSH-219ENST00000593101 PHLDB1Q86UU1 1377 aa23.86■■□□□ 1.41
PRKCSH-219ENST00000593101 CFDP1Q9UEE9 299 aaPredicted RBP23.85■■□□□ 1.41
PRKCSH-219ENST00000593101 GPATCH8Q9UKJ3 1502 aaKnown RBP23.84■■□□□ 1.41
PRKCSH-219ENST00000593101 KIF13AQ9H1H9 1805 aa23.83■■□□□ 1.41
PRKCSH-219ENST00000593101 PLCH2O75038 1416 aa23.83■■□□□ 1.4
PRKCSH-219ENST00000593101 MYOM3Q5VTT5 1437 aa23.82■■□□□ 1.4
PRKCSH-219ENST00000593101 EFCAB2Q5VUJ9 269 aa23.81■■□□□ 1.4
PRKCSH-219ENST00000593101 ZNF777Q9ULD5 760 aaPredicted RBP23.81■■□□□ 1.4
PRKCSH-219ENST00000593101 MYO5CQ9NQX4 1742 aa23.81■■□□□ 1.4
PRKCSH-219ENST00000593101 MAP3K4Q9Y6R4 1608 aa23.8■■□□□ 1.4
PRKCSH-219ENST00000593101 CDC42BPAQ5VT25 1732 aa23.79■■□□□ 1.4
PRKCSH-219ENST00000593101 ITSN2Q9NZM3 1697 aa23.78■■□□□ 1.4
PRKCSH-219ENST00000593101 ARHGAP5Q13017 1502 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms