RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 SENP3-EIF4A1A0A087X0R7 540 aa19.92■□□□□ 0.78
CIRBP-242ENST00000593093 MSH5O43196 834 aa19.92■□□□□ 0.78
CIRBP-242ENST00000593093 NBR1Q14596 966 aa19.9■□□□□ 0.78
CIRBP-242ENST00000593093 KIF21BO75037 1637 aa19.89■□□□□ 0.77
CIRBP-242ENST00000593093 NCAPD3P42695 1498 aa19.87■□□□□ 0.77
CIRBP-242ENST00000593093 DNAJC5BQ9UF47 199 aa19.86■□□□□ 0.77
CIRBP-242ENST00000593093 CCDC136Q96JN2 1154 aa19.85■□□□□ 0.77
CIRBP-242ENST00000593093 FAM9BQ8IZU0 186 aa19.82■□□□□ 0.76
CIRBP-242ENST00000593093 POLR3GLQ9BT43 218 aa19.81■□□□□ 0.76
CIRBP-242ENST00000593093 B4GALNT3Q6L9W6 998 aa19.8■□□□□ 0.76
CIRBP-242ENST00000593093 PPP1R15AO75807 674 aaPredicted RBP19.78■□□□□ 0.76
CIRBP-242ENST00000593093 TONSLQ96HA7 1378 aa19.75■□□□□ 0.75
CIRBP-242ENST00000593093 ARAP1Q96P48 1450 aa19.72■□□□□ 0.75
CIRBP-242ENST00000593093 CADPSQ9ULU8 1353 aa19.71■□□□□ 0.75
CIRBP-242ENST00000593093 DEKP35659 375 aaKnown RBP19.71■□□□□ 0.75
CIRBP-242ENST00000593093 CCER2I3L3R5 266 aa19.7■□□□□ 0.74
CIRBP-242ENST00000593093 CUX1P39880 1505 aa19.7■□□□□ 0.74
CIRBP-242ENST00000593093 KIF27Q86VH2 1401 aa19.7■□□□□ 0.74
CIRBP-242ENST00000593093 CC2D2AQ9P2K1 1620 aa19.7■□□□□ 0.74
CIRBP-242ENST00000593093 SETD5Q9C0A6 1442 aa19.69■□□□□ 0.74
CIRBP-242ENST00000593093 CUX2O14529 1486 aa19.69■□□□□ 0.74
CIRBP-242ENST00000593093 HMGXB3Q12766 1538 aa19.69■□□□□ 0.74
CIRBP-242ENST00000593093 CFTRP13569 1480 aa19.67■□□□□ 0.74
CIRBP-242ENST00000593093 WDR97A6NE52 1622 aa19.66■□□□□ 0.74
CIRBP-242ENST00000593093 SALL2Q9Y467 1007 aaPredicted RBP19.66■□□□□ 0.74
CIRBP-242ENST00000593093 NESP48681 1621 aa19.66■□□□□ 0.74
CIRBP-242ENST00000593093 TOP2BQ02880 1626 aa19.65■□□□□ 0.74
CIRBP-242ENST00000593093 CHIC2Q9UKJ5 165 aa19.63■□□□□ 0.73
CIRBP-242ENST00000593093 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.62■□□□□ 0.73
CIRBP-242ENST00000593093 RRBP1Q9P2E9 1410 aaKnown RBP19.62■□□□□ 0.73
CIRBP-242ENST00000593093 MRS2Q9HD23 443 aa19.61■□□□□ 0.73
CIRBP-242ENST00000593093 RTN4Q9NQC3 1192 aaKnown RBP19.6■□□□□ 0.73
CIRBP-242ENST00000593093 NPM2Q86SE8 214 aaKnown RBP19.6■□□□□ 0.73
CIRBP-242ENST00000593093 ARID3CA6NKF2 412 aa19.58■□□□□ 0.72
CIRBP-242ENST00000593093 RTL5Q5HYW3 569 aaPredicted RBP19.58■□□□□ 0.72
CIRBP-242ENST00000593093 PPP4R2Q9NY27 417 aa19.58■□□□□ 0.72
CIRBP-242ENST00000593093 CCDC184Q52MB2 194 aa19.57■□□□□ 0.72
CIRBP-242ENST00000593093 PHLDB1Q86UU1 1377 aa19.55■□□□□ 0.72
CIRBP-242ENST00000593093 FANCIQ9NVI1 1328 aa19.55■□□□□ 0.72
CIRBP-242ENST00000593093 RRP7BPQ9NSQ0 103 aa19.55■□□□□ 0.72
CIRBP-242ENST00000593093 FANCD2Q9BXW9 1451 aa19.53■□□□□ 0.72
CIRBP-242ENST00000593093 RAD54L2Q9Y4B4 1467 aa19.53■□□□□ 0.72
CIRBP-242ENST00000593093 FGD5Q6ZNL6 1462 aa19.53■□□□□ 0.72
CIRBP-242ENST00000593093 CARMIL1Q5VZK9 1371 aa19.52■□□□□ 0.72
CIRBP-242ENST00000593093 HSPA5P11021 654 aaKnown RBP19.51■□□□□ 0.71
CIRBP-242ENST00000593093 ZNF326Q5BKZ1 582 aaKnown RBP19.51■□□□□ 0.71
CIRBP-242ENST00000593093 NOP58Q9Y2X3 529 aaKnown RBP19.51■□□□□ 0.71
CIRBP-242ENST00000593093 MAPKBP1O60336 1514 aa19.51■□□□□ 0.71
CIRBP-242ENST00000593093 PAK3O75914 559 aaPredicted RBP19.5■□□□□ 0.71
CIRBP-242ENST00000593093 IGF1RP08069 1367 aa19.5■□□□□ 0.71
CIRBP-242ENST00000593093 TDRD9Q8NDG6 1382 aaKnown RBP19.49■□□□□ 0.71
CIRBP-242ENST00000593093 FOXD1Q16676 465 aa19.48■□□□□ 0.71
CIRBP-242ENST00000593093 ARHGAP35Q9NRY4 1499 aa19.47■□□□□ 0.71
CIRBP-242ENST00000593093 PRXQ9BXM0 1461 aa19.47■□□□□ 0.71
CIRBP-242ENST00000593093 ANP32AP39687 249 aaKnown RBP19.46■□□□□ 0.71
CIRBP-242ENST00000593093 EIF5BO60841 1220 aaKnown RBP19.45■□□□□ 0.7
CIRBP-242ENST00000593093 EIF4G2P78344 907 aaKnown RBP eCLIP19.44■□□□□ 0.7
CIRBP-242ENST00000593093 BIVM-ERCC5R4GMW8 1640 aa19.44■□□□□ 0.7
CIRBP-242ENST00000593093 TIMELESSQ9UNS1 1208 aa19.43■□□□□ 0.7
CIRBP-242ENST00000593093 ZBTB47Q9UFB7 747 aaPredicted RBP19.42■□□□□ 0.7
CIRBP-242ENST00000593093 WASHC2AQ641Q2 1341 aa19.39■□□□□ 0.69
CIRBP-242ENST00000593093 LAS1LQ9Y4W2 734 aaKnown RBP19.39■□□□□ 0.69
CIRBP-242ENST00000593093 MTUS2Q5JR59 1369 aa19.35■□□□□ 0.69
CIRBP-242ENST00000593093 MYT1LQ9UL68 1186 aa19.33■□□□□ 0.69
CIRBP-242ENST00000593093 FBLN2P98095 1184 aa19.32■□□□□ 0.68
CIRBP-242ENST00000593093 FHOD3Q2V2M9 1422 aa19.32■□□□□ 0.68
CIRBP-242ENST00000593093 LRRC9Q6ZRR7 1453 aa19.31■□□□□ 0.68
CIRBP-242ENST00000593093 PRKRIP1Q9H875 184 aaPredicted RBP19.3■□□□□ 0.68
CIRBP-242ENST00000593093 C11orf95C9JLR9 678 aaPredicted RBP19.29■□□□□ 0.68
CIRBP-242ENST00000593093 POLA1P09884 1462 aaPredicted RBP19.29■□□□□ 0.68
CIRBP-242ENST00000593093 ERICH3Q5RHP9 1530 aa19.29■□□□□ 0.68
CIRBP-242ENST00000593093 L3MBTL2Q969R5 705 aa19.28■□□□□ 0.68
CIRBP-242ENST00000593093 TOPBP1Q92547 1522 aa19.28■□□□□ 0.68
CIRBP-242ENST00000593093 IL27Q8NEV9 243 aa19.27■□□□□ 0.68
CIRBP-242ENST00000593093 UBE2Q2Q8WVN8 375 aa19.24■□□□□ 0.67
CIRBP-242ENST00000593093 IPO9Q96P70 1041 aaKnown RBP19.23■□□□□ 0.67
CIRBP-242ENST00000593093 NEFMP07197 916 aa19.22■□□□□ 0.67
CIRBP-242ENST00000593093 PDS5BQ9NTI5 1447 aa19.21■□□□□ 0.67
CIRBP-242ENST00000593093 TMC1Q8TDI8 760 aa19.21■□□□□ 0.67
CIRBP-242ENST00000593093 ERICH6BQ5W0A0 696 aa19.21■□□□□ 0.67
CIRBP-242ENST00000593093 AKNAQ7Z591 1439 aa19.21■□□□□ 0.67
CIRBP-242ENST00000593093 CCDC18Q5T9S5 1454 aa19.21■□□□□ 0.67
CIRBP-242ENST00000593093 FHAD1B1AJZ9 1412 aa19.2■□□□□ 0.66
CIRBP-242ENST00000593093 TIAM1Q13009 1591 aa19.19■□□□□ 0.66
CIRBP-242ENST00000593093 URB2Q14146 1524 aaKnown RBP19.18■□□□□ 0.66
CIRBP-242ENST00000593093 ZBED9Q6R2W3 1325 aa19.17■□□□□ 0.66
CIRBP-242ENST00000593093 MPHOSPH9Q99550 1183 aa19.14■□□□□ 0.66
CIRBP-242ENST00000593093 DNMBPQ6XZF7 1577 aa19.14■□□□□ 0.65
CIRBP-242ENST00000593093 AQRO60306 1485 aaKnown RBP eCLIP19.14■□□□□ 0.652e-10■■■■■ 31.7
CIRBP-242ENST00000593093 SLC4A1APQ9BWU0 796 aaKnown RBP19.13■□□□□ 0.65
CIRBP-242ENST00000593093 DAXXQ9UER7 740 aaPredicted RBP19.13■□□□□ 0.65
CIRBP-242ENST00000593093 NUDCQ9Y266 331 aa19.11■□□□□ 0.65
CIRBP-242ENST00000593093 KDM2AQ9Y2K7 1162 aa19.1■□□□□ 0.65
CIRBP-242ENST00000593093 NBPF8Q3BBV2 869 aa19.1■□□□□ 0.65
CIRBP-242ENST00000593093 SKAP1Q86WV1 359 aa19.1■□□□□ 0.65
CIRBP-242ENST00000593093 GAPVD1Q14C86 1478 aa19.1■□□□□ 0.65
CIRBP-242ENST00000593093 PTPRKQ15262 1439 aa19.09■□□□□ 0.65
CIRBP-242ENST00000593093 FGD6Q6ZV73 1430 aa19.09■□□□□ 0.65
CIRBP-242ENST00000593093 UACAQ9BZF9 1416 aa19.08■□□□□ 0.65
CIRBP-242ENST00000593093 KIF7Q2M1P5 1343 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms