RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 CHMP7Q8WUX9 453 aaPredicted RBP29.22■■■□□ 2.27
HDAC5-212ENST00000593013 GRIN2AQ12879 1464 aa29.22■■■□□ 2.27
HDAC5-212ENST00000593013 CLIP1P30622 1438 aa29.21■■■□□ 2.27
HDAC5-212ENST00000593013 FBLN2P98095 1184 aa29.17■■■□□ 2.26
HDAC5-212ENST00000593013 VPS8Q8N3P4 1428 aa29.08■■■□□ 2.25
HDAC5-212ENST00000593013 NUP160Q12769 1436 aa29.07■■■□□ 2.24
HDAC5-212ENST00000593013 CEP170Q5SW79 1584 aa29.06■■■□□ 2.24
HDAC5-212ENST00000593013 CTTNBP2Q8WZ74 1663 aa29.01■■■□□ 2.23
HDAC5-212ENST00000593013 PPARGC1BQ86YN6 1023 aaKnown RBP29■■■□□ 2.23
HDAC5-212ENST00000593013 OSCARQ8IYS5 282 aa28.99■■■□□ 2.23
HDAC5-212ENST00000593013 KIAA0586Q9BVV6 1533 aa28.97■■■□□ 2.23
HDAC5-212ENST00000593013 ARAP1Q96P48 1450 aa28.91■■■□□ 2.22
HDAC5-212ENST00000593013 IQGAP2Q13576 1575 aa28.91■■■□□ 2.22
HDAC5-212ENST00000593013 CLASP1Q7Z460 1538 aa28.89■■■□□ 2.22
HDAC5-212ENST00000593013 ZEB1P37275 1124 aaPredicted RBP28.83■■■□□ 2.21
HDAC5-212ENST00000593013 UGGT2Q9NYU1 1516 aa28.79■■■□□ 2.2
HDAC5-212ENST00000593013 JPH4Q96JJ6 628 aa28.78■■■□□ 2.2
HDAC5-212ENST00000593013 ARHGAP35Q9NRY4 1499 aa28.78■■■□□ 2.2
HDAC5-212ENST00000593013 RANGAP1P46060 587 aaPredicted RBP28.77■■■□□ 2.2
HDAC5-212ENST00000593013 SHROOM2Q13796 1616 aa28.76■■■□□ 2.19
HDAC5-212ENST00000593013 DNAJC5Q9H3Z4 198 aa28.71■■■□□ 2.19
HDAC5-212ENST00000593013 SAMD9Q5K651 1589 aa28.7■■■□□ 2.19
HDAC5-212ENST00000593013 EFCAB5A4FU69 1503 aa28.69■■■□□ 2.18
HDAC5-212ENST00000593013 DISP1Q96F81 1524 aa28.69■■■□□ 2.18
HDAC5-212ENST00000593013 APLP2Q06481 763 aa28.65■■■□□ 2.18
HDAC5-212ENST00000593013 PRG4Q92954 1404 aaPredicted RBP28.64■■■□□ 2.18
HDAC5-212ENST00000593013 TTBK1Q5TCY1 1321 aaPredicted RBP28.63■■■□□ 2.17
HDAC5-212ENST00000593013 KIAA0556O60303 1618 aa28.62■■■□□ 2.17
HDAC5-212ENST00000593013 ARHGEF11O15085 1522 aa28.61■■■□□ 2.17
HDAC5-212ENST00000593013 P3H3Q8IVL6 736 aa28.59■■■□□ 2.17
HDAC5-212ENST00000593013 CARMIL2Q6F5E8 1435 aa28.59■■■□□ 2.17
HDAC5-212ENST00000593013 RIMBP3CA6NJZ7 1639 aa28.58■■■□□ 2.17
HDAC5-212ENST00000593013 RIMBP3BA6NNM3 1639 aa28.58■■■□□ 2.17
HDAC5-212ENST00000593013 RIMBP3Q9UFD9 1639 aa28.58■■■□□ 2.17
HDAC5-212ENST00000593013 ERCC6L2Q5T890 1561 aa28.58■■■□□ 2.17
HDAC5-212ENST00000593013 FHOD3Q2V2M9 1422 aa28.56■■■□□ 2.16
HDAC5-212ENST00000593013 MAP3K1Q13233 1512 aa28.53■■■□□ 2.16
HDAC5-212ENST00000593013 FMN1Q68DA7 1419 aa28.42■■■□□ 2.14
HDAC5-212ENST00000593013 TIAM1Q13009 1591 aa28.42■■■□□ 2.14
HDAC5-212ENST00000593013 PTPRGP23470 1445 aa28.4■■■□□ 2.14
HDAC5-212ENST00000593013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.39■■■□□ 2.14
HDAC5-212ENST00000593013 CFAP43Q8NDM7 1665 aa28.38■■■□□ 2.13
HDAC5-212ENST00000593013 KANK4Q5T7N3 995 aaPredicted RBP28.36■■■□□ 2.13
HDAC5-212ENST00000593013 PCF11O94913 1555 aaKnown RBP28.36■■■□□ 2.13
HDAC5-212ENST00000593013 CCER1Q8TC90 406 aaPredicted RBP28.35■■■□□ 2.13
HDAC5-212ENST00000593013 RRBP1Q9P2E9 1410 aaKnown RBP28.33■■■□□ 2.13
HDAC5-212ENST00000593013 FYCO1Q9BQS8 1478 aa28.31■■■□□ 2.12
HDAC5-212ENST00000593013 CASKIN1Q8WXD9 1431 aa28.3■■■□□ 2.12
HDAC5-212ENST00000593013 PLB1Q6P1J6 1458 aa28.3■■■□□ 2.12
HDAC5-212ENST00000593013 ABCA8O94911 1581 aa28.28■■■□□ 2.12
HDAC5-212ENST00000593013 RAPGEF6Q8TEU7 1601 aa28.25■■■□□ 2.11
HDAC5-212ENST00000593013 LRRC9Q6ZRR7 1453 aa28.25■■■□□ 2.11
HDAC5-212ENST00000593013 CYB5RLQ6IPT4 315 aa28.24■■■□□ 2.11
HDAC5-212ENST00000593013 UACAQ9BZF9 1416 aa28.23■■■□□ 2.11
HDAC5-212ENST00000593013 NUP153P49790 1475 aaKnown RBP28.2■■■□□ 2.1
HDAC5-212ENST00000593013 HECW1Q76N89 1606 aa28.18■■■□□ 2.1
HDAC5-212ENST00000593013 HNRNPUL2Q1KMD3 747 aaKnown RBP28.18■■■□□ 2.1
HDAC5-212ENST00000593013 UHRF1BP1LA0JNW5 1464 aa28.17■■■□□ 2.1
HDAC5-212ENST00000593013 LRRIQ1Q96JM4 1722 aa28.17■■■□□ 2.1
HDAC5-212ENST00000593013 ABCC2Q92887 1545 aa28.17■■■□□ 2.1
HDAC5-212ENST00000593013 ATP1B4Q9UN42 357 aaPredicted RBP28.15■■■□□ 2.1
HDAC5-212ENST00000593013 CCNB3Q8WWL7 1395 aa28.13■■■□□ 2.09
HDAC5-212ENST00000593013 ADCY10Q96PN6 1610 aa28.13■■■□□ 2.09
HDAC5-212ENST00000593013 EPRSP07814 1512 aaKnown RBP28.12■■■□□ 2.09
HDAC5-212ENST00000593013 CCDC18Q5T9S5 1454 aa28.07■■■□□ 2.08
HDAC5-212ENST00000593013 ATP10BO94823 1461 aa28.07■■■□□ 2.08
HDAC5-212ENST00000593013 CDK13Q14004 1512 aaKnown RBP28.06■■■□□ 2.08
HDAC5-212ENST00000593013 ARID3CA6NKF2 412 aa28.05■■■□□ 2.08
HDAC5-212ENST00000593013 KDM5BQ9UGL1 1544 aa28.04■■■□□ 2.08
HDAC5-212ENST00000593013 PHLDB1Q86UU1 1377 aa27.99■■■□□ 2.07
HDAC5-212ENST00000593013 ZCCHC11Q5TAX3 1644 aaKnown RBP27.98■■■□□ 2.07
HDAC5-212ENST00000593013 MAGI3Q5TCQ9 1506 aa27.93■■■□□ 2.06
HDAC5-212ENST00000593013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.9■■■□□ 2.06
HDAC5-212ENST00000593013 CLSPNQ9HAW4 1339 aa27.89■■■□□ 2.06
HDAC5-212ENST00000593013 CDK11AQ9UQ88 783 aaPredicted RBP27.89■■■□□ 2.05
HDAC5-212ENST00000593013 EHBP1L1Q8N3D4 1523 aa27.88■■■□□ 2.05
HDAC5-212ENST00000593013 NPM1P06748 294 aaKnown RBP eCLIP27.87■■■□□ 2.05
HDAC5-212ENST00000593013 MTUS2Q5JR59 1369 aa27.86■■■□□ 2.05
HDAC5-212ENST00000593013 DHX57Q6P158 1386 aaKnown RBP27.85■■■□□ 2.05
HDAC5-212ENST00000593013 PLEKHD1A6NEE1 506 aa27.84■■■□□ 2.05
HDAC5-212ENST00000593013 TROQ12816 1431 aaPredicted RBP27.84■■■□□ 2.05
HDAC5-212ENST00000593013 SUPT6HQ7KZ85 1726 aaKnown RBP27.83■■■□□ 2.05
HDAC5-212ENST00000593013 MAPKBP1O60336 1514 aa27.81■■■□□ 2.04
HDAC5-212ENST00000593013 ASXL2Q76L83 1435 aa27.8■■■□□ 2.04
HDAC5-212ENST00000593013 WDR7Q9Y4E6 1490 aa27.77■■■□□ 2.04
HDAC5-212ENST00000593013 FGD6Q6ZV73 1430 aa27.77■■■□□ 2.04
HDAC5-212ENST00000593013 NCOA2Q15596 1464 aa27.75■■■□□ 2.03
HDAC5-212ENST00000593013 KIF14Q15058 1648 aa27.73■■■□□ 2.03
HDAC5-212ENST00000593013 MYOM3Q5VTT5 1437 aa27.7■■■□□ 2.03
HDAC5-212ENST00000593013 SETD5Q9C0A6 1442 aa27.7■■■□□ 2.02
HDAC5-212ENST00000593013 RAB3GAP2Q9H2M9 1393 aa27.69■■■□□ 2.02
HDAC5-212ENST00000593013 KCNH8Q96L42 1107 aa27.67■■■□□ 2.02
HDAC5-212ENST00000593013 ABCC10Q5T3U5 1492 aa27.66■■■□□ 2.02
HDAC5-212ENST00000593013 FAM50AQ14320 339 aaKnown RBP27.65■■■□□ 2.02
HDAC5-212ENST00000593013 ITGAEP38570 1179 aa27.64■■■□□ 2.01
HDAC5-212ENST00000593013 DIP2BQ9P265 1576 aa27.63■■■□□ 2.01
HDAC5-212ENST00000593013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.63■■■□□ 2.01
HDAC5-212ENST00000593013 KIF13AQ9H1H9 1805 aa27.62■■■□□ 2.01
HDAC5-212ENST00000593013 PTPN23Q9H3S7 1636 aa27.6■■■□□ 2.01
HDAC5-212ENST00000593013 TTC37Q6PGP7 1564 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms