RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 SHROOM2Q13796 1616 aa25.48■■□□□ 1.67
ERCC1-217ENST00000592905 JPH4Q96JJ6 628 aa25.46■■□□□ 1.67
ERCC1-217ENST00000592905 RAPGEF2Q9Y4G8 1499 aa25.44■■□□□ 1.66
ERCC1-217ENST00000592905 KIAA0586Q9BVV6 1533 aa25.42■■□□□ 1.66
ERCC1-217ENST00000592905 PRG4Q92954 1404 aaPredicted RBP25.41■■□□□ 1.66
ERCC1-217ENST00000592905 FAM9AQ8IZU1 332 aaPredicted RBP25.4■■□□□ 1.66
ERCC1-217ENST00000592905 CSRNP3Q8WYN3 585 aa25.36■■□□□ 1.65
ERCC1-217ENST00000592905 PRXQ9BXM0 1461 aa25.33■■□□□ 1.65
ERCC1-217ENST00000592905 IQGAP2Q13576 1575 aa25.3■■□□□ 1.64
ERCC1-217ENST00000592905 EEA1Q15075 1411 aa25.29■■□□□ 1.64
ERCC1-217ENST00000592905 CTTNBP2Q8WZ74 1663 aa25.23■■□□□ 1.63
ERCC1-217ENST00000592905 TTBK1Q5TCY1 1321 aaPredicted RBP25.2■■□□□ 1.62
ERCC1-217ENST00000592905 CARMIL2Q6F5E8 1435 aa25.15■■□□□ 1.62
ERCC1-217ENST00000592905 EHMT2Q96KQ7 1210 aa25.14■■□□□ 1.62
ERCC1-217ENST00000592905 DISP1Q96F81 1524 aa25.13■■□□□ 1.61
ERCC1-217ENST00000592905 UGGT2Q9NYU1 1516 aa25.13■■□□□ 1.61
ERCC1-217ENST00000592905 TRHP20396 242 aaPredicted RBP25.09■■□□□ 1.61
ERCC1-217ENST00000592905 PTPRGP23470 1445 aa25.09■■□□□ 1.61
ERCC1-217ENST00000592905 TNIKQ9UKE5 1360 aa25.08■■□□□ 1.61
ERCC1-217ENST00000592905 KIF21BO75037 1637 aa25.08■■□□□ 1.6
ERCC1-217ENST00000592905 KIAA0556O60303 1618 aa25.06■■□□□ 1.6
ERCC1-217ENST00000592905 RANGAP1P46060 587 aaPredicted RBP25.03■■□□□ 1.6
ERCC1-217ENST00000592905 ADCY10Q96PN6 1610 aa25.03■■□□□ 1.6
ERCC1-217ENST00000592905 P3H3Q8IVL6 736 aa24.99■■□□□ 1.59
ERCC1-217ENST00000592905 GOLGA3Q08378 1498 aa24.97■■□□□ 1.59
ERCC1-217ENST00000592905 NPM1P06748 294 aaKnown RBP eCLIP24.96■■□□□ 1.59
ERCC1-217ENST00000592905 UBTFP17480 764 aaKnown RBP24.96■■□□□ 1.59
ERCC1-217ENST00000592905 UACAQ9BZF9 1416 aa24.9■■□□□ 1.58
ERCC1-217ENST00000592905 SAMD9Q5K651 1589 aa24.88■■□□□ 1.57
ERCC1-217ENST00000592905 ABCC2Q92887 1545 aa24.85■■□□□ 1.57
ERCC1-217ENST00000592905 UHRF1BP1LA0JNW5 1464 aa24.84■■□□□ 1.57
ERCC1-217ENST00000592905 PLB1Q6P1J6 1458 aa24.84■■□□□ 1.57
ERCC1-217ENST00000592905 KIF13AQ9H1H9 1805 aa24.8■■□□□ 1.56
ERCC1-217ENST00000592905 MAPKBP1O60336 1514 aa24.8■■□□□ 1.56
ERCC1-217ENST00000592905 FHOD3Q2V2M9 1422 aa24.78■■□□□ 1.56
ERCC1-217ENST00000592905 ABCA8O94911 1581 aa24.78■■□□□ 1.56
ERCC1-217ENST00000592905 ZCCHC11Q5TAX3 1644 aaKnown RBP24.75■■□□□ 1.55
ERCC1-217ENST00000592905 FAM69CQ0P6D2 419 aa24.74■■□□□ 1.55
ERCC1-217ENST00000592905 KDM5BQ9UGL1 1544 aa24.74■■□□□ 1.55
ERCC1-217ENST00000592905 ARID3CA6NKF2 412 aa24.73■■□□□ 1.55
ERCC1-217ENST00000592905 EFCAB5A4FU69 1503 aa24.72■■□□□ 1.55
ERCC1-217ENST00000592905 ABCC10Q5T3U5 1492 aa24.72■■□□□ 1.55
ERCC1-217ENST00000592905 ASXL2Q76L83 1435 aa24.71■■□□□ 1.55
ERCC1-217ENST00000592905 DIP2BQ9P265 1576 aa24.7■■□□□ 1.54
ERCC1-217ENST00000592905 RAPGEF6Q8TEU7 1601 aa24.67■■□□□ 1.54
ERCC1-217ENST00000592905 ARHGAP35Q9NRY4 1499 aa24.66■■□□□ 1.54
ERCC1-217ENST00000592905 TSPOAP1O95153 1857 aa24.63■■□□□ 1.53
ERCC1-217ENST00000592905 ATP10BO94823 1461 aa24.6■■□□□ 1.53
ERCC1-217ENST00000592905 LOC105371045A0A1W2PR82 267 aa24.57■■□□□ 1.52
ERCC1-217ENST00000592905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.57■■□□□ 1.52
ERCC1-217ENST00000592905 HNRNPUL2Q1KMD3 747 aaKnown RBP24.57■■□□□ 1.52
ERCC1-217ENST00000592905 KCNH8Q96L42 1107 aa24.57■■□□□ 1.52
ERCC1-217ENST00000592905 NUP153P49790 1475 aaKnown RBP24.57■■□□□ 1.52
ERCC1-217ENST00000592905 EPRSP07814 1512 aaKnown RBP24.56■■□□□ 1.52
ERCC1-217ENST00000592905 WDR7Q9Y4E6 1490 aa24.56■■□□□ 1.52
ERCC1-217ENST00000592905 ATP1B4Q9UN42 357 aaPredicted RBP24.54■■□□□ 1.52
ERCC1-217ENST00000592905 GLI2P10070 1586 aa24.52■■□□□ 1.52
ERCC1-217ENST00000592905 CLIP1P30622 1438 aa24.51■■□□□ 1.51
ERCC1-217ENST00000592905 FMN1Q68DA7 1419 aa24.51■■□□□ 1.51
ERCC1-217ENST00000592905 PPRC1Q5VV67 1664 aaKnown RBP24.45■■□□□ 1.5
ERCC1-217ENST00000592905 MAP3K4Q9Y6R4 1608 aa24.45■■□□□ 1.5
ERCC1-217ENST00000592905 CDK13Q14004 1512 aaKnown RBP24.44■■□□□ 1.5
ERCC1-217ENST00000592905 HECW1Q76N89 1606 aa24.42■■□□□ 1.5
ERCC1-217ENST00000592905 PLEKHD1A6NEE1 506 aa24.4■■□□□ 1.5
ERCC1-217ENST00000592905 LRRIQ1Q96JM4 1722 aa24.39■■□□□ 1.5
ERCC1-217ENST00000592905 CEP162Q5TB80 1403 aa24.39■■□□□ 1.5
ERCC1-217ENST00000592905 PCF11O94913 1555 aaKnown RBP24.37■■□□□ 1.49
ERCC1-217ENST00000592905 CFAP43Q8NDM7 1665 aa24.37■■□□□ 1.49
ERCC1-217ENST00000592905 CD109Q6YHK3 1445 aa24.36■■□□□ 1.49
ERCC1-217ENST00000592905 CASKIN1Q8WXD9 1431 aa24.34■■□□□ 1.49
ERCC1-217ENST00000592905 KDM6BO15054 1643 aa24.32■■□□□ 1.48
ERCC1-217ENST00000592905 ABCA9Q8IUA7 1624 aa24.31■■□□□ 1.48
ERCC1-217ENST00000592905 TEX14Q8IWB6 1497 aa24.29■■□□□ 1.48
ERCC1-217ENST00000592905 MAGI3Q5TCQ9 1506 aa24.27■■□□□ 1.48
ERCC1-217ENST00000592905 FYCO1Q9BQS8 1478 aa24.26■■□□□ 1.47
ERCC1-217ENST00000592905 CDK11AQ9UQ88 783 aaPredicted RBP24.25■■□□□ 1.47
ERCC1-217ENST00000592905 COL17A1Q9UMD9 1497 aaPredicted RBP24.23■■□□□ 1.47
ERCC1-217ENST00000592905 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.23■■□□□ 1.47
ERCC1-217ENST00000592905 CCDC18Q5T9S5 1454 aa24.21■■□□□ 1.47
ERCC1-217ENST00000592905 TTC37Q6PGP7 1564 aa24.2■■□□□ 1.47
ERCC1-217ENST00000592905 KIF14Q15058 1648 aa24.19■■□□□ 1.46
ERCC1-217ENST00000592905 TROQ12816 1431 aaPredicted RBP24.18■■□□□ 1.46
ERCC1-217ENST00000592905 MYO5CQ9NQX4 1742 aa24.09■■□□□ 1.45
ERCC1-217ENST00000592905 NEO1Q92859 1461 aa24.08■■□□□ 1.45
ERCC1-217ENST00000592905 VPS8Q8N3P4 1428 aa24.08■■□□□ 1.44
ERCC1-217ENST00000592905 FANCAO15360 1455 aa24.07■■□□□ 1.44
ERCC1-217ENST00000592905 ARAP3Q8WWN8 1544 aa24.06■■□□□ 1.44
ERCC1-217ENST00000592905 PLCH2O75038 1416 aa24.06■■□□□ 1.44
ERCC1-217ENST00000592905 PHLDB1Q86UU1 1377 aa24.04■■□□□ 1.44
ERCC1-217ENST00000592905 AKNAQ7Z591 1439 aa24.04■■□□□ 1.44
ERCC1-217ENST00000592905 RAPGEF3O95398 923 aa24.04■■□□□ 1.44
ERCC1-217ENST00000592905 CFAP74Q9C0B2 1584 aa24.02■■□□□ 1.44
ERCC1-217ENST00000592905 MTUS2Q5JR59 1369 aa24.02■■□□□ 1.44
ERCC1-217ENST00000592905 CDC42BPBQ9Y5S2 1711 aa24.01■■□□□ 1.43
ERCC1-217ENST00000592905 EFCAB2Q5VUJ9 269 aa23.99■■□□□ 1.43
ERCC1-217ENST00000592905 ARHGAP5Q13017 1502 aa23.99■■□□□ 1.43
ERCC1-217ENST00000592905 CDC42BPAQ5VT25 1732 aa23.98■■□□□ 1.43
ERCC1-217ENST00000592905 TIAM1Q13009 1591 aa23.95■■□□□ 1.43
ERCC1-217ENST00000592905 PREX2Q70Z35 1606 aa23.95■■□□□ 1.42
ERCC1-217ENST00000592905 FRMPD1Q5SYB0 1578 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms