RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 KIF21AQ7Z4S6 1674 aa24.63■■□□□ 1.53
PRKCSH-217ENST00000592741 CFAP43Q8NDM7 1665 aa24.62■■□□□ 1.53
PRKCSH-217ENST00000592741 ZNF316A6NFI3 1004 aaPredicted RBP24.62■■□□□ 1.53
PRKCSH-217ENST00000592741 PCF11O94913 1555 aaKnown RBP24.62■■□□□ 1.53
PRKCSH-217ENST00000592741 CLSPNQ9HAW4 1339 aa24.61■■□□□ 1.53
PRKCSH-217ENST00000592741 LRRC9Q6ZRR7 1453 aa24.6■■□□□ 1.53
PRKCSH-217ENST00000592741 DNAJC5BQ9UF47 199 aa24.57■■□□□ 1.52
PRKCSH-217ENST00000592741 DHX57Q6P158 1386 aaKnown RBP24.57■■□□□ 1.52
PRKCSH-217ENST00000592741 GAPVD1Q14C86 1478 aa24.57■■□□□ 1.52
PRKCSH-217ENST00000592741 FHOD3Q2V2M9 1422 aa24.56■■□□□ 1.52
PRKCSH-217ENST00000592741 FYCO1Q9BQS8 1478 aa24.55■■□□□ 1.52
PRKCSH-217ENST00000592741 P3H3Q8IVL6 736 aa24.55■■□□□ 1.52
PRKCSH-217ENST00000592741 TDRD9Q8NDG6 1382 aaKnown RBP24.54■■□□□ 1.52
PRKCSH-217ENST00000592741 AQRO60306 1485 aaKnown RBP eCLIP24.53■■□□□ 1.521e-6■■■□□ 18.9
PRKCSH-217ENST00000592741 CASKIN1Q8WXD9 1431 aa24.51■■□□□ 1.51
PRKCSH-217ENST00000592741 TARBP1Q13395 1621 aaKnown RBP24.48■■□□□ 1.51
PRKCSH-217ENST00000592741 FMN1Q68DA7 1419 aa24.46■■□□□ 1.51
PRKCSH-217ENST00000592741 PHLDB1Q86UU1 1377 aa24.45■■□□□ 1.5
PRKCSH-217ENST00000592741 ATP1B4Q9UN42 357 aaPredicted RBP24.44■■□□□ 1.5
PRKCSH-217ENST00000592741 SAMD9Q5K651 1589 aa24.44■■□□□ 1.5
PRKCSH-217ENST00000592741 ITGAEP38570 1179 aa24.42■■□□□ 1.5
PRKCSH-217ENST00000592741 MRC2Q9UBG0 1479 aa24.38■■□□□ 1.49
PRKCSH-217ENST00000592741 SNAPC4Q5SXM2 1469 aa24.38■■□□□ 1.49
PRKCSH-217ENST00000592741 PBRM1Q86U86 1689 aa24.38■■□□□ 1.49
PRKCSH-217ENST00000592741 RAB3GAP2Q9H2M9 1393 aa24.35■■□□□ 1.49
PRKCSH-217ENST00000592741 SETD5Q9C0A6 1442 aa24.32■■□□□ 1.48
PRKCSH-217ENST00000592741 FAM50AQ14320 339 aaKnown RBP24.31■■□□□ 1.48
PRKCSH-217ENST00000592741 THOC2Q8NI27 1593 aaKnown RBP24.3■■□□□ 1.48
PRKCSH-217ENST00000592741 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.29■■□□□ 1.48
PRKCSH-217ENST00000592741 ADAMTS12P58397 1594 aa24.28■■□□□ 1.48
PRKCSH-217ENST00000592741 GRIN2BQ13224 1484 aa24.27■■□□□ 1.48
PRKCSH-217ENST00000592741 SCAF1Q9H7N4 1312 aaKnown RBP24.25■■□□□ 1.47
PRKCSH-217ENST00000592741 LRRIQ1Q96JM4 1722 aa24.24■■□□□ 1.47
PRKCSH-217ENST00000592741 CENPBP07199 599 aaPredicted RBP24.24■■□□□ 1.47
PRKCSH-217ENST00000592741 ACIN1Q9UKV3 1341 aaKnown RBP24.24■■□□□ 1.47
PRKCSH-217ENST00000592741 MTUS2Q5JR59 1369 aa24.24■■□□□ 1.47
PRKCSH-217ENST00000592741 MAPKBP1O60336 1514 aa24.21■■□□□ 1.47
PRKCSH-217ENST00000592741 IFT140Q96RY7 1462 aa24.21■■□□□ 1.47
PRKCSH-217ENST00000592741 IQGAP2Q13576 1575 aa24.21■■□□□ 1.47
PRKCSH-217ENST00000592741 FGD6Q6ZV73 1430 aa24.21■■□□□ 1.47
PRKCSH-217ENST00000592741 WDR62O43379 1518 aa24.2■■□□□ 1.47
PRKCSH-217ENST00000592741 EHBP1L1Q8N3D4 1523 aa24.17■■□□□ 1.46
PRKCSH-217ENST00000592741 SUPT6HQ7KZ85 1726 aaKnown RBP24.16■■□□□ 1.46
PRKCSH-217ENST00000592741 NEUROD1Q13562 356 aa24.16■■□□□ 1.46
PRKCSH-217ENST00000592741 CCDC18Q5T9S5 1454 aa24.15■■□□□ 1.46
PRKCSH-217ENST00000592741 NCOA2Q15596 1464 aa24.13■■□□□ 1.45
PRKCSH-217ENST00000592741 HECW1Q76N89 1606 aa24.13■■□□□ 1.45
PRKCSH-217ENST00000592741 MIER1Q8N108 512 aa24.12■■□□□ 1.45
PRKCSH-217ENST00000592741 MYOM3Q5VTT5 1437 aa24.1■■□□□ 1.45
PRKCSH-217ENST00000592741 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
PRKCSH-217ENST00000592741 UGGT2Q9NYU1 1516 aa24.07■■□□□ 1.44
PRKCSH-217ENST00000592741 ARHGEF11O15085 1522 aa24.04■■□□□ 1.44
PRKCSH-217ENST00000592741 MAGI3Q5TCQ9 1506 aa24.03■■□□□ 1.44
PRKCSH-217ENST00000592741 EIF4G3O43432 1585 aaKnown RBP24.02■■□□□ 1.44
PRKCSH-217ENST00000592741 ERCC6Q03468 1493 aa24.01■■□□□ 1.43
PRKCSH-217ENST00000592741 PTPN23Q9H3S7 1636 aa24■■□□□ 1.43
PRKCSH-217ENST00000592741 EPRSP07814 1512 aaKnown RBP24■■□□□ 1.43
PRKCSH-217ENST00000592741 HFM1A2PYH4 1435 aa24■■□□□ 1.43
PRKCSH-217ENST00000592741 KIAA0586Q9BVV6 1533 aa23.99■■□□□ 1.43
PRKCSH-217ENST00000592741 PTPRKQ15262 1439 aa23.98■■□□□ 1.43
PRKCSH-217ENST00000592741 GRIN2AQ12879 1464 aa23.96■■□□□ 1.43
PRKCSH-217ENST00000592741 KIAA0556O60303 1618 aa23.95■■□□□ 1.42
PRKCSH-217ENST00000592741 YTHDC1Q96MU7 727 aaKnown RBP23.95■■□□□ 1.42
PRKCSH-217ENST00000592741 TIMELESSQ9UNS1 1208 aa23.95■■□□□ 1.42
PRKCSH-217ENST00000592741 TCOF1Q13428 1488 aaKnown RBP23.94■■□□□ 1.42
PRKCSH-217ENST00000592741 SIN3AQ96ST3 1273 aa23.93■■□□□ 1.42
PRKCSH-217ENST00000592741 CDK13Q14004 1512 aaKnown RBP23.93■■□□□ 1.42
PRKCSH-217ENST00000592741 MAGI1Q96QZ7 1491 aaPredicted RBP23.91■■□□□ 1.42
PRKCSH-217ENST00000592741 DISP1Q96F81 1524 aa23.91■■□□□ 1.42
PRKCSH-217ENST00000592741 UACAQ9BZF9 1416 aa23.91■■□□□ 1.42
PRKCSH-217ENST00000592741 NAIPQ13075 1403 aa23.9■■□□□ 1.42
PRKCSH-217ENST00000592741 GTF3C3Q9Y5Q9 886 aa23.89■■□□□ 1.41
PRKCSH-217ENST00000592741 MIA2Q96PC5 1412 aa23.86■■□□□ 1.41
PRKCSH-217ENST00000592741 RAPGEF6Q8TEU7 1601 aa23.84■■□□□ 1.41
PRKCSH-217ENST00000592741 GCC2Q8IWJ2 1684 aa23.83■■□□□ 1.4
PRKCSH-217ENST00000592741 SYNJ2O15056 1496 aa23.83■■□□□ 1.4
PRKCSH-217ENST00000592741 AKNAQ7Z591 1439 aa23.81■■□□□ 1.4
PRKCSH-217ENST00000592741 NUP153P49790 1475 aaKnown RBP23.8■■□□□ 1.4
PRKCSH-217ENST00000592741 CEP170Q5SW79 1584 aa23.79■■□□□ 1.4
PRKCSH-217ENST00000592741 ARID3CA6NKF2 412 aa23.78■■□□□ 1.4
PRKCSH-217ENST00000592741 CHMP7Q8WUX9 453 aaPredicted RBP23.78■■□□□ 1.4
PRKCSH-217ENST00000592741 PPP1R15AO75807 674 aaPredicted RBP23.77■■□□□ 1.4
PRKCSH-217ENST00000592741 TONSLQ96HA7 1378 aa23.76■■□□□ 1.39
PRKCSH-217ENST00000592741 RRP7BPQ9NSQ0 103 aa23.72■■□□□ 1.39
PRKCSH-217ENST00000592741 CDK11AQ9UQ88 783 aaPredicted RBP23.72■■□□□ 1.39
PRKCSH-217ENST00000592741 CHIC2Q9UKJ5 165 aa23.71■■□□□ 1.39
PRKCSH-217ENST00000592741 NUP160Q12769 1436 aa23.71■■□□□ 1.39
PRKCSH-217ENST00000592741 CARMIL2Q6F5E8 1435 aa23.68■■□□□ 1.38
PRKCSH-217ENST00000592741 FBLN2P98095 1184 aa23.67■■□□□ 1.38
PRKCSH-217ENST00000592741 DNMT1P26358 1616 aaKnown RBP23.66■■□□□ 1.38
PRKCSH-217ENST00000592741 DAPK1P53355 1430 aa23.65■■□□□ 1.38
PRKCSH-217ENST00000592741 KDM6BO15054 1643 aa23.65■■□□□ 1.38
PRKCSH-217ENST00000592741 TROQ12816 1431 aaPredicted RBP23.64■■□□□ 1.38
PRKCSH-217ENST00000592741 ROCK1Q13464 1354 aa23.63■■□□□ 1.37
PRKCSH-217ENST00000592741 PLB1Q6P1J6 1458 aa23.62■■□□□ 1.37
PRKCSH-217ENST00000592741 TRIM52Q96A61 297 aa23.62■■□□□ 1.37
PRKCSH-217ENST00000592741 ITSN2Q9NZM3 1697 aa23.61■■□□□ 1.37
PRKCSH-217ENST00000592741 JPH4Q96JJ6 628 aa23.6■■□□□ 1.37
PRKCSH-217ENST00000592741 ADCY10Q96PN6 1610 aa23.6■■□□□ 1.37
PRKCSH-217ENST00000592741 ABCC5O15440 1437 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms