RNA–Protein interactions for RNA: ENST00000592621.5

RANBP3-228, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-228ENST00000592621 SHROOM2Q13796 1616 aa19.58■□□□□ 0.72
RANBP3-228ENST00000592621 CSRNP3Q8WYN3 585 aa19.57■□□□□ 0.72
RANBP3-228ENST00000592621 KIAA0586Q9BVV6 1533 aa19.56■□□□□ 0.72
RANBP3-228ENST00000592621 ERCC6L2Q5T890 1561 aa19.49■□□□□ 0.71
RANBP3-228ENST00000592621 ARAP1Q96P48 1450 aa19.48■□□□□ 0.71
RANBP3-228ENST00000592621 FAM9AQ8IZU1 332 aaPredicted RBP19.48■□□□□ 0.71
RANBP3-228ENST00000592621 JPH4Q96JJ6 628 aa19.48■□□□□ 0.71
RANBP3-228ENST00000592621 IQGAP2Q13576 1575 aa19.45■□□□□ 0.7
RANBP3-228ENST00000592621 KIF21BO75037 1637 aa19.44■□□□□ 0.7
RANBP3-228ENST00000592621 PRG4Q92954 1404 aaPredicted RBP19.44■□□□□ 0.7
RANBP3-228ENST00000592621 CTTNBP2Q8WZ74 1663 aa19.43■□□□□ 0.7
RANBP3-228ENST00000592621 UGGT2Q9NYU1 1516 aa19.38■□□□□ 0.69
RANBP3-228ENST00000592621 CYB5RLQ6IPT4 315 aa19.37■□□□□ 0.69
RANBP3-228ENST00000592621 DISP1Q96F81 1524 aa19.35■□□□□ 0.69
RANBP3-228ENST00000592621 GOLGA3Q08378 1498 aa19.31■□□□□ 0.68
RANBP3-228ENST00000592621 CARMIL2Q6F5E8 1435 aa19.3■□□□□ 0.68
RANBP3-228ENST00000592621 KIAA0556O60303 1618 aa19.29■□□□□ 0.68
RANBP3-228ENST00000592621 TNIKQ9UKE5 1360 aa19.25■□□□□ 0.67
RANBP3-228ENST00000592621 SAMD9Q5K651 1589 aa19.22■□□□□ 0.67
RANBP3-228ENST00000592621 PTPRGP23470 1445 aa19.21■□□□□ 0.67
RANBP3-228ENST00000592621 EHMT2Q96KQ7 1210 aa19.19■□□□□ 0.66
RANBP3-228ENST00000592621 UBTFP17480 764 aaKnown RBP19.18■□□□□ 0.66
RANBP3-228ENST00000592621 ADCY10Q96PN6 1610 aa19.16■□□□□ 0.66
RANBP3-228ENST00000592621 EFCAB5A4FU69 1503 aa19.13■□□□□ 0.65
RANBP3-228ENST00000592621 UHRF1BP1LA0JNW5 1464 aa19.11■□□□□ 0.65
RANBP3-228ENST00000592621 UACAQ9BZF9 1416 aa19.11■□□□□ 0.65
RANBP3-228ENST00000592621 TTBK1Q5TCY1 1321 aaPredicted RBP19.11■□□□□ 0.65
RANBP3-228ENST00000592621 P3H3Q8IVL6 736 aa19.09■□□□□ 0.65
RANBP3-228ENST00000592621 ABCC2Q92887 1545 aa19.09■□□□□ 0.65
RANBP3-228ENST00000592621 ABCA8O94911 1581 aa19.08■□□□□ 0.65
RANBP3-228ENST00000592621 RANGAP1P46060 587 aaPredicted RBP19.08■□□□□ 0.64
RANBP3-228ENST00000592621 PLB1Q6P1J6 1458 aa19.07■□□□□ 0.64
RANBP3-228ENST00000592621 ARHGAP35Q9NRY4 1499 aa19.07■□□□□ 0.64
RANBP3-228ENST00000592621 FHOD3Q2V2M9 1422 aa19.07■□□□□ 0.64
RANBP3-228ENST00000592621 KDM5BQ9UGL1 1544 aa19.03■□□□□ 0.64
RANBP3-228ENST00000592621 MAPKBP1O60336 1514 aa19.02■□□□□ 0.64
RANBP3-228ENST00000592621 LOC105371045A0A1W2PR82 267 aa18.98■□□□□ 0.63
RANBP3-228ENST00000592621 NPM1P06748 294 aaKnown RBP eCLIP18.98■□□□□ 0.63
RANBP3-228ENST00000592621 ZCCHC11Q5TAX3 1644 aaKnown RBP18.97■□□□□ 0.63
RANBP3-228ENST00000592621 RAPGEF6Q8TEU7 1601 aa18.97■□□□□ 0.63
RANBP3-228ENST00000592621 CLIP1P30622 1438 aa18.95■□□□□ 0.62
RANBP3-228ENST00000592621 FMN1Q68DA7 1419 aa18.92■□□□□ 0.62
RANBP3-228ENST00000592621 NUP153P49790 1475 aaKnown RBP18.92■□□□□ 0.62
RANBP3-228ENST00000592621 CEP162Q5TB80 1403 aa18.91■□□□□ 0.62
RANBP3-228ENST00000592621 ASXL2Q76L83 1435 aa18.91■□□□□ 0.62
RANBP3-228ENST00000592621 ATP10BO94823 1461 aa18.9■□□□□ 0.62
RANBP3-228ENST00000592621 ABCC10Q5T3U5 1492 aa18.9■□□□□ 0.62
RANBP3-228ENST00000592621 TRHP20396 242 aaPredicted RBP18.89■□□□□ 0.61
RANBP3-228ENST00000592621 DIP2BQ9P265 1576 aa18.89■□□□□ 0.61
RANBP3-228ENST00000592621 KIF13AQ9H1H9 1805 aa18.88■□□□□ 0.61
RANBP3-228ENST00000592621 WDR7Q9Y4E6 1490 aa18.84■□□□□ 0.61
RANBP3-228ENST00000592621 HECW1Q76N89 1606 aa18.83■□□□□ 0.61
RANBP3-228ENST00000592621 PCF11O94913 1555 aaKnown RBP18.82■□□□□ 0.6
RANBP3-228ENST00000592621 ARID3CA6NKF2 412 aa18.82■□□□□ 0.6
RANBP3-228ENST00000592621 EPRSP07814 1512 aaKnown RBP18.82■□□□□ 0.6
RANBP3-228ENST00000592621 CASKIN1Q8WXD9 1431 aa18.82■□□□□ 0.6
RANBP3-228ENST00000592621 GLI2P10070 1586 aa18.81■□□□□ 0.6
RANBP3-228ENST00000592621 FAM69CQ0P6D2 419 aa18.8■□□□□ 0.6
RANBP3-228ENST00000592621 CDK13Q14004 1512 aaKnown RBP18.79■□□□□ 0.6
RANBP3-228ENST00000592621 LRRIQ1Q96JM4 1722 aa18.79■□□□□ 0.6
RANBP3-228ENST00000592621 FYCO1Q9BQS8 1478 aa18.77■□□□□ 0.6
RANBP3-228ENST00000592621 MAP3K4Q9Y6R4 1608 aa18.73■□□□□ 0.59
RANBP3-228ENST00000592621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.72■□□□□ 0.59
RANBP3-228ENST00000592621 HNRNPUL2Q1KMD3 747 aaKnown RBP18.72■□□□□ 0.59
RANBP3-228ENST00000592621 ATP1B4Q9UN42 357 aaPredicted RBP18.72■□□□□ 0.59
RANBP3-228ENST00000592621 CCDC18Q5T9S5 1454 aa18.71■□□□□ 0.59
RANBP3-228ENST00000592621 PPRC1Q5VV67 1664 aaKnown RBP18.69■□□□□ 0.58
RANBP3-228ENST00000592621 VPS8Q8N3P4 1428 aa18.69■□□□□ 0.58
RANBP3-228ENST00000592621 PLEKHD1A6NEE1 506 aa18.69■□□□□ 0.58
RANBP3-228ENST00000592621 KCNH8Q96L42 1107 aa18.69■□□□□ 0.58
RANBP3-228ENST00000592621 ABCA9Q8IUA7 1624 aa18.68■□□□□ 0.58
RANBP3-228ENST00000592621 CFAP43Q8NDM7 1665 aa18.68■□□□□ 0.58
RANBP3-228ENST00000592621 TSPOAP1O95153 1857 aa18.65■□□□□ 0.58
RANBP3-228ENST00000592621 MAGI3Q5TCQ9 1506 aa18.64■□□□□ 0.58
RANBP3-228ENST00000592621 TROQ12816 1431 aaPredicted RBP18.64■□□□□ 0.57
RANBP3-228ENST00000592621 CD109Q6YHK3 1445 aa18.64■□□□□ 0.57
RANBP3-228ENST00000592621 CDK11AQ9UQ88 783 aaPredicted RBP18.63■□□□□ 0.57
RANBP3-228ENST00000592621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.63■□□□□ 0.577e-8■□□□□ 9
RANBP3-228ENST00000592621 TTC37Q6PGP7 1564 aa18.6■□□□□ 0.57
RANBP3-228ENST00000592621 KIF14Q15058 1648 aa18.6■□□□□ 0.57
RANBP3-228ENST00000592621 TEX14Q8IWB6 1497 aa18.58■□□□□ 0.57
RANBP3-228ENST00000592621 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
RANBP3-228ENST00000592621 MAP3K1Q13233 1512 aa18.54■□□□□ 0.56
RANBP3-228ENST00000592621 KDM6BO15054 1643 aa18.52■□□□□ 0.55
RANBP3-228ENST00000592621 COL17A1Q9UMD9 1497 aaPredicted RBP18.52■□□□□ 0.55
RANBP3-228ENST00000592621 EHBP1L1Q8N3D4 1523 aa18.51■□□□□ 0.55
RANBP3-228ENST00000592621 PLCH2O75038 1416 aa18.5■□□□□ 0.55
RANBP3-228ENST00000592621 MTUS2Q5JR59 1369 aa18.5■□□□□ 0.55
RANBP3-228ENST00000592621 NEO1Q92859 1461 aa18.5■□□□□ 0.55
RANBP3-228ENST00000592621 ARAP3Q8WWN8 1544 aa18.49■□□□□ 0.55
RANBP3-228ENST00000592621 MYO5CQ9NQX4 1742 aa18.49■□□□□ 0.55
RANBP3-228ENST00000592621 PHLDB1Q86UU1 1377 aa18.47■□□□□ 0.55
RANBP3-228ENST00000592621 FANCAO15360 1455 aa18.46■□□□□ 0.55
RANBP3-228ENST00000592621 LRRC9Q6ZRR7 1453 aa18.46■□□□□ 0.55
RANBP3-228ENST00000592621 CFAP74Q9C0B2 1584 aa18.45■□□□□ 0.54
RANBP3-228ENST00000592621 PREX2Q70Z35 1606 aa18.45■□□□□ 0.54
RANBP3-228ENST00000592621 CDC42BPBQ9Y5S2 1711 aa18.44■□□□□ 0.54
RANBP3-228ENST00000592621 CDC42BPAQ5VT25 1732 aa18.43■□□□□ 0.54
RANBP3-228ENST00000592621 AKNAQ7Z591 1439 aa18.43■□□□□ 0.54
RANBP3-228ENST00000592621 KANK4Q5T7N3 995 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms