RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 CHD1O14646 1710 aa17.3■□□□□ 0.36
SMAD4-214ENST00000592186 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
SMAD4-214ENST00000592186 KIAA0586Q9BVV6 1533 aa17.28■□□□□ 0.36
SMAD4-214ENST00000592186 LOC105371045A0A1W2PR82 267 aa17.26■□□□□ 0.35
SMAD4-214ENST00000592186 TNIKQ9UKE5 1360 aa17.24■□□□□ 0.35
SMAD4-214ENST00000592186 CEP170Q5SW79 1584 aa17.24■□□□□ 0.35
SMAD4-214ENST00000592186 JPH4Q96JJ6 628 aa17.23■□□□□ 0.35
SMAD4-214ENST00000592186 CLASP1Q7Z460 1538 aa17.19■□□□□ 0.34
SMAD4-214ENST00000592186 IQGAP2Q13576 1575 aa17.18■□□□□ 0.34
SMAD4-214ENST00000592186 CTTNBP2Q8WZ74 1663 aa17.15■□□□□ 0.34
SMAD4-214ENST00000592186 CARMIL2Q6F5E8 1435 aa17.12■□□□□ 0.33
SMAD4-214ENST00000592186 UGGT2Q9NYU1 1516 aa17.12■□□□□ 0.33
SMAD4-214ENST00000592186 PRG4Q92954 1404 aaPredicted RBP17.11■□□□□ 0.33
SMAD4-214ENST00000592186 RANGAP1P46060 587 aaPredicted RBP17.1■□□□□ 0.33
SMAD4-214ENST00000592186 SHROOM2Q13796 1616 aa17.09■□□□□ 0.33
SMAD4-214ENST00000592186 DNAJC5Q9H3Z4 198 aa17.07■□□□□ 0.32
SMAD4-214ENST00000592186 EFCAB5A4FU69 1503 aa17.05■□□□□ 0.32
SMAD4-214ENST00000592186 CLIP1P30622 1438 aa17.05■□□□□ 0.32
SMAD4-214ENST00000592186 CEP162Q5TB80 1403 aa17.04■□□□□ 0.32
SMAD4-214ENST00000592186 DISP1Q96F81 1524 aa17.03■□□□□ 0.32
SMAD4-214ENST00000592186 P3H3Q8IVL6 736 aa17.01■□□□□ 0.31
SMAD4-214ENST00000592186 SAMD9Q5K651 1589 aa17■□□□□ 0.31
SMAD4-214ENST00000592186 PTPRGP23470 1445 aa16.99■□□□□ 0.31
SMAD4-214ENST00000592186 ARHGAP35Q9NRY4 1499 aa16.99■□□□□ 0.31
SMAD4-214ENST00000592186 ARHGEF11O15085 1522 aa16.98■□□□□ 0.31
SMAD4-214ENST00000592186 KIAA0556O60303 1618 aa16.98■□□□□ 0.31
SMAD4-214ENST00000592186 ERCC6L2Q5T890 1561 aa16.94■□□□□ 0.3
SMAD4-214ENST00000592186 FMN1Q68DA7 1419 aa16.94■□□□□ 0.3
SMAD4-214ENST00000592186 FHOD3Q2V2M9 1422 aa16.93■□□□□ 0.3
SMAD4-214ENST00000592186 TTBK1Q5TCY1 1321 aaPredicted RBP16.93■□□□□ 0.3
SMAD4-214ENST00000592186 RIMBP3CA6NJZ7 1639 aa16.91■□□□□ 0.3
SMAD4-214ENST00000592186 RIMBP3BA6NNM3 1639 aa16.91■□□□□ 0.3
SMAD4-214ENST00000592186 RIMBP3Q9UFD9 1639 aa16.91■□□□□ 0.3
SMAD4-214ENST00000592186 CYB5RLQ6IPT4 315 aa16.91■□□□□ 0.3
SMAD4-214ENST00000592186 ARAP1Q96P48 1450 aa16.9■□□□□ 0.3
SMAD4-214ENST00000592186 UACAQ9BZF9 1416 aa16.87■□□□□ 0.29
SMAD4-214ENST00000592186 FOXD1Q16676 465 aa16.85■□□□□ 0.29
SMAD4-214ENST00000592186 UHRF1BP1LA0JNW5 1464 aa16.83■□□□□ 0.28
SMAD4-214ENST00000592186 VPS8Q8N3P4 1428 aa16.82■□□□□ 0.28
SMAD4-214ENST00000592186 NPM1P06748 294 aaKnown RBP eCLIP16.82■□□□□ 0.28
SMAD4-214ENST00000592186 CASKIN1Q8WXD9 1431 aa16.81■□□□□ 0.28
SMAD4-214ENST00000592186 ATP1B4Q9UN42 357 aaPredicted RBP16.81■□□□□ 0.28
SMAD4-214ENST00000592186 PLB1Q6P1J6 1458 aa16.81■□□□□ 0.28
SMAD4-214ENST00000592186 ABCA8O94911 1581 aa16.79■□□□□ 0.28
SMAD4-214ENST00000592186 ABCC2Q92887 1545 aa16.78■□□□□ 0.28
SMAD4-214ENST00000592186 FYCO1Q9BQS8 1478 aa16.78■□□□□ 0.28
SMAD4-214ENST00000592186 RAPGEF6Q8TEU7 1601 aa16.77■□□□□ 0.27
SMAD4-214ENST00000592186 APLP2Q06481 763 aa16.76■□□□□ 0.27
SMAD4-214ENST00000592186 CDK11AQ9UQ88 783 aaPredicted RBP16.74■□□□□ 0.27
SMAD4-214ENST00000592186 NUP153P49790 1475 aaKnown RBP16.74■□□□□ 0.27
SMAD4-214ENST00000592186 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.73■□□□□ 0.27
SMAD4-214ENST00000592186 HNRNPUL2Q1KMD3 747 aaKnown RBP16.73■□□□□ 0.27
SMAD4-214ENST00000592186 HECW1Q76N89 1606 aa16.72■□□□□ 0.27
SMAD4-214ENST00000592186 KDM5BQ9UGL1 1544 aa16.72■□□□□ 0.27
SMAD4-214ENST00000592186 ATP10BO94823 1461 aa16.71■□□□□ 0.27
SMAD4-214ENST00000592186 CCDC18Q5T9S5 1454 aa16.71■□□□□ 0.27
SMAD4-214ENST00000592186 ADCY10Q96PN6 1610 aa16.71■□□□□ 0.27
SMAD4-214ENST00000592186 EPRSP07814 1512 aaKnown RBP16.7■□□□□ 0.26
SMAD4-214ENST00000592186 PCF11O94913 1555 aaKnown RBP16.7■□□□□ 0.26
SMAD4-214ENST00000592186 PLEKHD1A6NEE1 506 aa16.7■□□□□ 0.26
SMAD4-214ENST00000592186 ARID3CA6NKF2 412 aa16.69■□□□□ 0.26
SMAD4-214ENST00000592186 MAP3K1Q13233 1512 aa16.67■□□□□ 0.26
SMAD4-214ENST00000592186 ZCCHC11Q5TAX3 1644 aaKnown RBP16.61■□□□□ 0.25
SMAD4-214ENST00000592186 PLPPR3Q6T4P5 718 aa16.61■□□□□ 0.25
SMAD4-214ENST00000592186 CDK13Q14004 1512 aaKnown RBP16.61■□□□□ 0.25
SMAD4-214ENST00000592186 ASXL2Q76L83 1435 aa16.6■□□□□ 0.25
SMAD4-214ENST00000592186 MAPKBP1O60336 1514 aa16.6■□□□□ 0.25
SMAD4-214ENST00000592186 MTUS2Q5JR59 1369 aa16.6■□□□□ 0.25
SMAD4-214ENST00000592186 TIAM1Q13009 1591 aa16.58■□□□□ 0.25
SMAD4-214ENST00000592186 TROQ12816 1431 aaPredicted RBP16.57■□□□□ 0.24
SMAD4-214ENST00000592186 KCNH8Q96L42 1107 aa16.57■□□□□ 0.24
SMAD4-214ENST00000592186 WDR7Q9Y4E6 1490 aa16.57■□□□□ 0.24
SMAD4-214ENST00000592186 LRRC9Q6ZRR7 1453 aa16.55■□□□□ 0.24
SMAD4-214ENST00000592186 KANK4Q5T7N3 995 aaPredicted RBP16.55■□□□□ 0.24
SMAD4-214ENST00000592186 LRRIQ1Q96JM4 1722 aa16.54■□□□□ 0.24
SMAD4-214ENST00000592186 CFAP43Q8NDM7 1665 aa16.52■□□□□ 0.24
SMAD4-214ENST00000592186 EHBP1L1Q8N3D4 1523 aa16.51■□□□□ 0.23
SMAD4-214ENST00000592186 ABCC10Q5T3U5 1492 aa16.49■□□□□ 0.23
SMAD4-214ENST00000592186 FAM69CQ0P6D2 419 aa16.49■□□□□ 0.23
SMAD4-214ENST00000592186 MAGI3Q5TCQ9 1506 aa16.48■□□□□ 0.23
SMAD4-214ENST00000592186 KIF14Q15058 1648 aa16.46■□□□□ 0.23
SMAD4-214ENST00000592186 TRHP20396 242 aaPredicted RBP16.45■□□□□ 0.22
SMAD4-214ENST00000592186 GLI2P10070 1586 aa16.44■□□□□ 0.22
SMAD4-214ENST00000592186 CCNB3Q8WWL7 1395 aa16.44■□□□□ 0.22
SMAD4-214ENST00000592186 PPARGC1BQ86YN6 1023 aaKnown RBP16.44■□□□□ 0.22
SMAD4-214ENST00000592186 NCOA2Q15596 1464 aa16.43■□□□□ 0.22
SMAD4-214ENST00000592186 SUPT6HQ7KZ85 1726 aaKnown RBP16.42■□□□□ 0.22
SMAD4-214ENST00000592186 CD109Q6YHK3 1445 aa16.42■□□□□ 0.22
SMAD4-214ENST00000592186 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMAD4-214ENST00000592186 ABCA9Q8IUA7 1624 aa16.4■□□□□ 0.22
SMAD4-214ENST00000592186 DIP2BQ9P265 1576 aa16.4■□□□□ 0.22
SMAD4-214ENST00000592186 EFCAB2Q5VUJ9 269 aa16.4■□□□□ 0.22
SMAD4-214ENST00000592186 PLCH2O75038 1416 aa16.39■□□□□ 0.21
SMAD4-214ENST00000592186 CFDP1Q9UEE9 299 aaPredicted RBP16.39■□□□□ 0.21
SMAD4-214ENST00000592186 GPATCH8Q9UKJ3 1502 aaKnown RBP16.37■□□□□ 0.21
SMAD4-214ENST00000592186 MYOM3Q5VTT5 1437 aa16.36■□□□□ 0.21
SMAD4-214ENST00000592186 ARAP3Q8WWN8 1544 aa16.36■□□□□ 0.21
SMAD4-214ENST00000592186 PHLDB1Q86UU1 1377 aa16.36■□□□□ 0.21
SMAD4-214ENST00000592186 MIA2Q96PC5 1412 aa16.35■□□□□ 0.21
SMAD4-214ENST00000592186 TTC37Q6PGP7 1564 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms