RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 ERICH3Q5RHP9 1530 aa17.89■□□□□ 0.45
VMP1-214ENST00000592106 FHAD1B1AJZ9 1412 aa17.88■□□□□ 0.45
VMP1-214ENST00000592106 NUP160Q12769 1436 aa17.85■□□□□ 0.45
VMP1-214ENST00000592106 CEP170Q5SW79 1584 aa17.83■□□□□ 0.44
VMP1-214ENST00000592106 SHROOM2Q13796 1616 aa17.76■□□□□ 0.43
VMP1-214ENST00000592106 ERCC6L2Q5T890 1561 aa17.72■□□□□ 0.43
VMP1-214ENST00000592106 KIF27Q86VH2 1401 aa17.68■□□□□ 0.42
VMP1-214ENST00000592106 RUSC2Q8N2Y8 1516 aa17.67■□□□□ 0.42
VMP1-214ENST00000592106 CUL7Q14999 1698 aa17.67■□□□□ 0.42
VMP1-214ENST00000592106 PRG4Q92954 1404 aaPredicted RBP17.66■□□□□ 0.42
VMP1-214ENST00000592106 JPH4Q96JJ6 628 aa17.63■□□□□ 0.41
VMP1-214ENST00000592106 IGF1RP08069 1367 aa17.58■□□□□ 0.4
VMP1-214ENST00000592106 KIAA0586Q9BVV6 1533 aa17.57■□□□□ 0.4
VMP1-214ENST00000592106 CARMIL1Q5VZK9 1371 aa17.52■□□□□ 0.39
VMP1-214ENST00000592106 NPM1P06748 294 aaKnown RBP eCLIP17.51■□□□□ 0.39
VMP1-214ENST00000592106 MAPKBP1O60336 1514 aa17.46■□□□□ 0.39
VMP1-214ENST00000592106 CARMIL2Q6F5E8 1435 aa17.46■□□□□ 0.39
VMP1-214ENST00000592106 KIF13AQ9H1H9 1805 aa17.45■□□□□ 0.38
VMP1-214ENST00000592106 ADCY10Q96PN6 1610 aa17.45■□□□□ 0.38
VMP1-214ENST00000592106 IQGAP2Q13576 1575 aa17.44■□□□□ 0.38
VMP1-214ENST00000592106 ABCC10Q5T3U5 1492 aa17.42■□□□□ 0.38
VMP1-214ENST00000592106 PTPRGP23470 1445 aa17.4■□□□□ 0.38
VMP1-214ENST00000592106 TNIKQ9UKE5 1360 aa17.4■□□□□ 0.38
VMP1-214ENST00000592106 RAPGEF2Q9Y4G8 1499 aa17.39■□□□□ 0.37
VMP1-214ENST00000592106 DIP2BQ9P265 1576 aa17.39■□□□□ 0.37
VMP1-214ENST00000592106 FAM69CQ0P6D2 419 aa17.38■□□□□ 0.37
VMP1-214ENST00000592106 TTBK1Q5TCY1 1321 aaPredicted RBP17.33■□□□□ 0.36
VMP1-214ENST00000592106 ABCC2Q92887 1545 aa17.31■□□□□ 0.36
VMP1-214ENST00000592106 UGGT2Q9NYU1 1516 aa17.31■□□□□ 0.36
VMP1-214ENST00000592106 UHRF1BP1LA0JNW5 1464 aa17.3■□□□□ 0.36
VMP1-214ENST00000592106 DISP1Q96F81 1524 aa17.29■□□□□ 0.36
VMP1-214ENST00000592106 UACAQ9BZF9 1416 aa17.28■□□□□ 0.36
VMP1-214ENST00000592106 KIAA0556O60303 1618 aa17.28■□□□□ 0.36
VMP1-214ENST00000592106 CTTNBP2Q8WZ74 1663 aa17.27■□□□□ 0.36
VMP1-214ENST00000592106 PLB1Q6P1J6 1458 aa17.27■□□□□ 0.36
VMP1-214ENST00000592106 KDM6BO15054 1643 aa17.25■□□□□ 0.35
VMP1-214ENST00000592106 ASXL2Q76L83 1435 aa17.24■□□□□ 0.35
VMP1-214ENST00000592106 GOLGA3Q08378 1498 aa17.23■□□□□ 0.35
VMP1-214ENST00000592106 TSPOAP1O95153 1857 aa17.22■□□□□ 0.35
VMP1-214ENST00000592106 GLI2P10070 1586 aa17.21■□□□□ 0.35
VMP1-214ENST00000592106 KDM5BQ9UGL1 1544 aa17.2■□□□□ 0.34
VMP1-214ENST00000592106 PRXQ9BXM0 1461 aa17.19■□□□□ 0.34
VMP1-214ENST00000592106 ZCCHC11Q5TAX3 1644 aaKnown RBP17.18■□□□□ 0.34
VMP1-214ENST00000592106 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
VMP1-214ENST00000592106 FAM9AQ8IZU1 332 aaPredicted RBP17.14■□□□□ 0.33
VMP1-214ENST00000592106 EPRSP07814 1512 aaKnown RBP17.14■□□□□ 0.33
VMP1-214ENST00000592106 PPP4R3CPQ6ZMV5 832 aa17.13■□□□□ 0.33
VMP1-214ENST00000592106 TEX14Q8IWB6 1497 aa17.12■□□□□ 0.33
VMP1-214ENST00000592106 WDR7Q9Y4E6 1490 aa17.11■□□□□ 0.33
VMP1-214ENST00000592106 PPRC1Q5VV67 1664 aaKnown RBP17.1■□□□□ 0.33
VMP1-214ENST00000592106 MAP3K4Q9Y6R4 1608 aa17.1■□□□□ 0.33
VMP1-214ENST00000592106 EEA1Q15075 1411 aa17.09■□□□□ 0.33
VMP1-214ENST00000592106 ABCA8O94911 1581 aa17.09■□□□□ 0.33
VMP1-214ENST00000592106 CSRNP3Q8WYN3 585 aa17.06■□□□□ 0.32
VMP1-214ENST00000592106 ILDR1Q86SU0 546 aaPredicted RBP17.05■□□□□ 0.32
VMP1-214ENST00000592106 CFAP43Q8NDM7 1665 aa17.02■□□□□ 0.32
VMP1-214ENST00000592106 SAMD9Q5K651 1589 aa17■□□□□ 0.31
VMP1-214ENST00000592106 CD109Q6YHK3 1445 aa16.97■□□□□ 0.31
VMP1-214ENST00000592106 MAGI3Q5TCQ9 1506 aa16.97■□□□□ 0.31
VMP1-214ENST00000592106 P3H3Q8IVL6 736 aa16.96■□□□□ 0.31
VMP1-214ENST00000592106 KCNH8Q96L42 1107 aa16.95■□□□□ 0.3
VMP1-214ENST00000592106 KDM4FA0A1W2PPD8 638 aa16.94■□□□□ 0.3
VMP1-214ENST00000592106 RAPGEF6Q8TEU7 1601 aa16.94■□□□□ 0.3
VMP1-214ENST00000592106 COL17A1Q9UMD9 1497 aaPredicted RBP16.93■□□□□ 0.3
VMP1-214ENST00000592106 ATP10BO94823 1461 aa16.92■□□□□ 0.3
VMP1-214ENST00000592106 KIF21BO75037 1637 aa16.91■□□□□ 0.3
VMP1-214ENST00000592106 ADGRL1O94910 1474 aa16.91■□□□□ 0.3
VMP1-214ENST00000592106 ARID3CA6NKF2 412 aa16.89■□□□□ 0.29
VMP1-214ENST00000592106 EFCAB5A4FU69 1503 aa16.89■□□□□ 0.29
VMP1-214ENST00000592106 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.87■□□□□ 0.29
VMP1-214ENST00000592106 HNRNPUL2Q1KMD3 747 aaKnown RBP16.87■□□□□ 0.29
VMP1-214ENST00000592106 ABCA9Q8IUA7 1624 aa16.87■□□□□ 0.29
VMP1-214ENST00000592106 FHOD3Q2V2M9 1422 aa16.86■□□□□ 0.29
VMP1-214ENST00000592106 RANGAP1P46060 587 aaPredicted RBP16.85■□□□□ 0.29
VMP1-214ENST00000592106 PHLDB1Q86UU1 1377 aa16.85■□□□□ 0.29
VMP1-214ENST00000592106 NUP153P49790 1475 aaKnown RBP16.83■□□□□ 0.28
VMP1-214ENST00000592106 ARAP3Q8WWN8 1544 aa16.82■□□□□ 0.28
VMP1-214ENST00000592106 NEO1Q92859 1461 aa16.8■□□□□ 0.28
VMP1-214ENST00000592106 MAPK8IP2Q13387 824 aaPredicted RBP16.8■□□□□ 0.28
VMP1-214ENST00000592106 NCBP3Q53F19 620 aaKnown RBP16.78■□□□□ 0.28
VMP1-214ENST00000592106 PLEKHD1A6NEE1 506 aa16.77■□□□□ 0.28
VMP1-214ENST00000592106 UBTFP17480 764 aaKnown RBP16.75■□□□□ 0.27
VMP1-214ENST00000592106 CFAP74Q9C0B2 1584 aa16.75■□□□□ 0.27
VMP1-214ENST00000592106 FMN1Q68DA7 1419 aa16.72■□□□□ 0.27
VMP1-214ENST00000592106 HECW1Q76N89 1606 aa16.72■□□□□ 0.27
VMP1-214ENST00000592106 CNKSR2Q8WXI2 1034 aa16.72■□□□□ 0.27
VMP1-214ENST00000592106 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.69■□□□□ 0.26
VMP1-214ENST00000592106 EHMT2Q96KQ7 1210 aa16.68■□□□□ 0.26
VMP1-214ENST00000592106 DMRT2Q9Y5R5 561 aa16.68■□□□□ 0.26
VMP1-214ENST00000592106 CDK13Q14004 1512 aaKnown RBP16.68■□□□□ 0.26
VMP1-214ENST00000592106 FANCAO15360 1455 aa16.67■□□□□ 0.26
VMP1-214ENST00000592106 DENND4BO75064 1496 aaPredicted RBP16.67■□□□□ 0.26
VMP1-214ENST00000592106 FRMPD1Q5SYB0 1578 aa16.67■□□□□ 0.26
VMP1-214ENST00000592106 RAPGEF3O95398 923 aa16.66■□□□□ 0.26
VMP1-214ENST00000592106 TTC37Q6PGP7 1564 aa16.66■□□□□ 0.26
VMP1-214ENST00000592106 AKNAQ7Z591 1439 aa16.66■□□□□ 0.26
VMP1-214ENST00000592106 HECW2Q9P2P5 1572 aa16.66■□□□□ 0.26
VMP1-214ENST00000592106 ARHGAP35Q9NRY4 1499 aa16.66■□□□□ 0.26
VMP1-214ENST00000592106 CDK11AQ9UQ88 783 aaPredicted RBP16.65■□□□□ 0.26
VMP1-214ENST00000592106 ARHGEF40Q8TER5 1519 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms