RNA–Protein interactions for RNA: ENST00000591471.5

HKR1-223, Transcript of HKR1, GLI-Kruppel zinc finger family member, human

TSL 2 BASIC

Gene HKR1, Length 3,472 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HKR1-223	ENST00000591471	IQGAP2	Q13576	1575 aa		12.09	□□□□□ -0.47
HKR1-223	ENST00000591471	SHROOM2	Q13796	1616 aa		12.08	□□□□□ -0.48
HKR1-223	ENST00000591471	PCGF6	Q9BYE7	350 aa		12.07	□□□□□ -0.48
HKR1-223	ENST00000591471	CEP170	Q5SW79	1584 aa		12.07	□□□□□ -0.48
HKR1-223	ENST00000591471	CEP162	Q5TB80	1403 aa		12.06	□□□□□ -0.48
HKR1-223	ENST00000591471	FAM9A	Q8IZU1	332 aa	Predicted RBP	12.05	□□□□□ -0.48
HKR1-223	ENST00000591471	CLASP1	Q7Z460	1538 aa		12.04	□□□□□ -0.48
HKR1-223	ENST00000591471	CLIP1	P30622	1438 aa		12	□□□□□ -0.49
HKR1-223	ENST00000591471	ARHGAP35	Q9NRY4	1499 aa		11.99	□□□□□ -0.49
HKR1-223	ENST00000591471	MAP3K1	Q13233	1512 aa		11.99	□□□□□ -0.49
HKR1-223	ENST00000591471	KIAA0556	O60303	1618 aa		11.98	□□□□□ -0.49
HKR1-223	ENST00000591471	HRC	P23327	699 aa		11.98	□□□□□ -0.49
HKR1-223	ENST00000591471	ARAP1	Q96P48	1450 aa		11.98	□□□□□ -0.49
HKR1-223	ENST00000591471	VPS8	Q8N3P4	1428 aa		11.96	□□□□□ -0.5
HKR1-223	ENST00000591471	UBTF	P17480	764 aa	Known RBP	11.95	□□□□□ -0.5
HKR1-223	ENST00000591471	DISP1	Q96F81	1524 aa		11.94	□□□□□ -0.5
HKR1-223	ENST00000591471	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.94	□□□□□ -0.5
HKR1-223	ENST00000591471	EHMT2	Q96KQ7	1210 aa		11.94	□□□□□ -0.5
HKR1-223	ENST00000591471	FMN1	Q68DA7	1419 aa		11.92	□□□□□ -0.5
HKR1-223	ENST00000591471	FYCO1	Q9BQS8	1478 aa		11.92	□□□□□ -0.5
HKR1-223	ENST00000591471	CFAP43	Q8NDM7	1665 aa		11.91	□□□□□ -0.5
HKR1-223	ENST00000591471	TRIM26	Q12899	539 aa	Predicted RBP	11.89	□□□□□ -0.51
HKR1-223	ENST00000591471	CARMIL2	Q6F5E8	1435 aa		11.89	□□□□□ -0.51
HKR1-223	ENST00000591471	CASKIN1	Q8WXD9	1431 aa		11.89	□□□□□ -0.51
HKR1-223	ENST00000591471	HECW1	Q76N89	1606 aa		11.87	□□□□□ -0.51
HKR1-223	ENST00000591471	PCF11	O94913	1555 aa	Known RBP	11.85	□□□□□ -0.51
HKR1-223	ENST00000591471	CCDC18	Q5T9S5	1454 aa		11.85	□□□□□ -0.51
HKR1-223	ENST00000591471	ABCA8	O94911	1581 aa		11.85	□□□□□ -0.51
HKR1-223	ENST00000591471	RAPGEF6	Q8TEU7	1601 aa		11.84	□□□□□ -0.51
HKR1-223	ENST00000591471	UHRF1BP1L	A0JNW5	1464 aa		11.82	□□□□□ -0.52
HKR1-223	ENST00000591471	TIAM1	Q13009	1591 aa		11.82	□□□□□ -0.52
HKR1-223	ENST00000591471	LRRIQ1	Q96JM4	1722 aa		11.82	□□□□□ -0.52
HKR1-223	ENST00000591471	JPH4	Q96JJ6	628 aa		11.81	□□□□□ -0.52
HKR1-223	ENST00000591471	FHOD3	Q2V2M9	1422 aa		11.8	□□□□□ -0.52
HKR1-223	ENST00000591471	PRG4	Q92954	1404 aa	Predicted RBP	11.8	□□□□□ -0.52
HKR1-223	ENST00000591471	ADCY10	Q96PN6	1610 aa		11.77	□□□□□ -0.53
HKR1-223	ENST00000591471	OSCAR	Q8IYS5	282 aa		11.76	□□□□□ -0.53
HKR1-223	ENST00000591471	ABCC2	Q92887	1545 aa		11.75	□□□□□ -0.53
HKR1-223	ENST00000591471	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.75	□□□□□ -0.53
HKR1-223	ENST00000591471	EHBP1L1	Q8N3D4	1523 aa		11.75	□□□□□ -0.53
HKR1-223	ENST00000591471	FBLN2	P98095	1184 aa		11.74	□□□□□ -0.53
HKR1-223	ENST00000591471	EPRS	P07814	1512 aa	Known RBP	11.73	□□□□□ -0.53
HKR1-223	ENST00000591471	NUP153	P49790	1475 aa	Known RBP	11.73	□□□□□ -0.53
HKR1-223	ENST00000591471	ARHGEF11	O15085	1522 aa		11.73	□□□□□ -0.53
HKR1-223	ENST00000591471	LRRC9	Q6ZRR7	1453 aa		11.72	□□□□□ -0.53
HKR1-223	ENST00000591471	ERCC6L2	Q5T890	1561 aa		11.72	□□□□□ -0.53
HKR1-223	ENST00000591471	UACA	Q9BZF9	1416 aa		11.71	□□□□□ -0.53
HKR1-223	ENST00000591471	PTPRG	P23470	1445 aa		11.7	□□□□□ -0.54
HKR1-223	ENST00000591471	KDM5B	Q9UGL1	1544 aa		11.7	□□□□□ -0.54
HKR1-223	ENST00000591471	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.7	□□□□□ -0.54
HKR1-223	ENST00000591471	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.66	□□□□□ -0.54
HKR1-223	ENST00000591471	PLB1	Q6P1J6	1458 aa		11.66	□□□□□ -0.54
HKR1-223	ENST00000591471	RIMBP3C	A6NJZ7	1639 aa		11.66	□□□□□ -0.54
HKR1-223	ENST00000591471	RIMBP3B	A6NNM3	1639 aa		11.66	□□□□□ -0.54
HKR1-223	ENST00000591471	RIMBP3	Q9UFD9	1639 aa		11.66	□□□□□ -0.54
HKR1-223	ENST00000591471	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
HKR1-223	ENST00000591471	ITSN2	Q9NZM3	1697 aa		11.64	□□□□□ -0.55
HKR1-223	ENST00000591471	ATP10B	O94823	1461 aa		11.64	□□□□□ -0.55
HKR1-223	ENST00000591471	MAGI3	Q5TCQ9	1506 aa		11.63	□□□□□ -0.55
HKR1-223	ENST00000591471	RRBP1	Q9P2E9	1410 aa	Known RBP	11.62	□□□□□ -0.55
HKR1-223	ENST00000591471	APLP2	Q06481	763 aa		11.62	□□□□□ -0.55
HKR1-223	ENST00000591471	TRO	Q12816	1431 aa	Predicted RBP	11.62	□□□□□ -0.55
HKR1-223	ENST00000591471	ARAP3	Q8WWN8	1544 aa		11.61	□□□□□ -0.55
HKR1-223	ENST00000591471	KIF14	Q15058	1648 aa		11.61	□□□□□ -0.55
HKR1-223	ENST00000591471	CDK13	Q14004	1512 aa	Known RBP	11.6	□□□□□ -0.55
HKR1-223	ENST00000591471	MAPKBP1	O60336	1514 aa		11.6	□□□□□ -0.55
HKR1-223	ENST00000591471	MIA2	Q96PC5	1412 aa		11.59	□□□□□ -0.55
HKR1-223	ENST00000591471	P3H3	Q8IVL6	736 aa		11.59	□□□□□ -0.55
HKR1-223	ENST00000591471	TCOF1	Q13428	1488 aa	Known RBP	11.59	□□□□□ -0.55
HKR1-223	ENST00000591471	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.58	□□□□□ -0.56
HKR1-223	ENST00000591471	ABCC10	Q5T3U5	1492 aa		11.57	□□□□□ -0.56
HKR1-223	ENST00000591471	NCOA2	Q15596	1464 aa		11.57	□□□□□ -0.56
HKR1-223	ENST00000591471	ZEB1	P37275	1124 aa	Predicted RBP	11.56	□□□□□ -0.56
HKR1-223	ENST00000591471	PREX2	Q70Z35	1606 aa		11.56	□□□□□ -0.56
HKR1-223	ENST00000591471	ABCA9	Q8IUA7	1624 aa		11.56	□□□□□ -0.56
HKR1-223	ENST00000591471	GLI2	P10070	1586 aa		11.55	□□□□□ -0.56
HKR1-223	ENST00000591471	MTUS2	Q5JR59	1369 aa		11.55	□□□□□ -0.56
HKR1-223	ENST00000591471	RANGAP1	P46060	587 aa	Predicted RBP	11.55	□□□□□ -0.56
HKR1-223	ENST00000591471	CDC42BPA	Q5VT25	1732 aa		11.54	□□□□□ -0.56
HKR1-223	ENST00000591471	MYOM3	Q5VTT5	1437 aa		11.54	□□□□□ -0.56
HKR1-223	ENST00000591471	MYO5C	Q9NQX4	1742 aa		11.53	□□□□□ -0.56
HKR1-223	ENST00000591471	WDR7	Q9Y4E6	1490 aa		11.53	□□□□□ -0.56
HKR1-223	ENST00000591471	KANK4	Q5T7N3	995 aa	Predicted RBP	11.53	□□□□□ -0.56
HKR1-223	ENST00000591471	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.52	□□□□□ -0.57
HKR1-223	ENST00000591471	CFAP74	Q9C0B2	1584 aa		11.52	□□□□□ -0.57
HKR1-223	ENST00000591471	PTPN23	Q9H3S7	1636 aa		11.52	□□□□□ -0.57
HKR1-223	ENST00000591471	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
HKR1-223	ENST00000591471	FGD6	Q6ZV73	1430 aa		11.5	□□□□□ -0.57
HKR1-223	ENST00000591471	CDC42BPB	Q9Y5S2	1711 aa		11.5	□□□□□ -0.57
HKR1-223	ENST00000591471	CROCC2	H7BZ55	1655 aa		11.5	□□□□□ -0.57
HKR1-223	ENST00000591471	ARHGEF5	Q12774	1597 aa		11.49	□□□□□ -0.57
HKR1-223	ENST00000591471	PHLDB1	Q86UU1	1377 aa		11.49	□□□□□ -0.57
HKR1-223	ENST00000591471	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.48	□□□□□ -0.57
HKR1-223	ENST00000591471	CCNB3	Q8WWL7	1395 aa		11.48	□□□□□ -0.57
HKR1-223	ENST00000591471	PLEKHD1	A6NEE1	506 aa		11.48	□□□□□ -0.57
HKR1-223	ENST00000591471	TTC37	Q6PGP7	1564 aa		11.48	□□□□□ -0.57
HKR1-223	ENST00000591471	DNMT1	P26358	1616 aa	Known RBP	11.47	□□□□□ -0.57
HKR1-223	ENST00000591471	MAP3K4	Q9Y6R4	1608 aa		11.47	□□□□□ -0.57
HKR1-223	ENST00000591471	AKNA	Q7Z591	1439 aa		11.47	□□□□□ -0.57
HKR1-223	ENST00000591471	PLEKHH2	Q8IVE3	1493 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms