RNA–Protein interactions for RNA: ENST00000591436.5

TMC6-218, Transcript of transmembrane channel like 6, humanhuman

TSL 1 (best) BASIC

Gene TMC6, Length 1,155 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-218ENST00000591436 RUSC2Q8N2Y8 1516 aa39.18■■■■□ 3.86
TMC6-218ENST00000591436 PRG4Q92954 1404 aaPredicted RBP39.17■■■■□ 3.86
TMC6-218ENST00000591436 CARMIL1Q5VZK9 1371 aa39.04■■■■□ 3.84
TMC6-218ENST00000591436 KIAA0586Q9BVV6 1533 aa39.02■■■■□ 3.84
TMC6-218ENST00000591436 RAPGEF2Q9Y4G8 1499 aa38.73■■■■□ 3.79
TMC6-218ENST00000591436 IQGAP2Q13576 1575 aa38.71■■■■□ 3.79
TMC6-218ENST00000591436 NPM1P06748 294 aaKnown RBP eCLIP38.69■■■■□ 3.78
TMC6-218ENST00000591436 ADCY10Q96PN6 1610 aa38.67■■■■□ 3.78
TMC6-218ENST00000591436 CARMIL2Q6F5E8 1435 aa38.65■■■■□ 3.78
TMC6-218ENST00000591436 PTPRGP23470 1445 aa38.62■■■■□ 3.77
TMC6-218ENST00000591436 TTBK1Q5TCY1 1321 aaPredicted RBP38.61■■■■□ 3.77
TMC6-218ENST00000591436 KIF13AQ9H1H9 1805 aa38.59■■■■□ 3.77
TMC6-218ENST00000591436 TNIKQ9UKE5 1360 aa38.57■■■■□ 3.77
TMC6-218ENST00000591436 MAPKBP1O60336 1514 aa38.53■■■■□ 3.76
TMC6-218ENST00000591436 DISP1Q96F81 1524 aa38.48■■■■□ 3.75
TMC6-218ENST00000591436 UGGT2Q9NYU1 1516 aa38.46■■■■□ 3.75
TMC6-218ENST00000591436 ABCC10Q5T3U5 1492 aa38.46■■■■□ 3.75
TMC6-218ENST00000591436 FAM69CQ0P6D2 419 aa38.45■■■■□ 3.75
TMC6-218ENST00000591436 CTTNBP2Q8WZ74 1663 aa38.41■■■■□ 3.74
TMC6-218ENST00000591436 PRXQ9BXM0 1461 aa38.39■■■■□ 3.74
TMC6-218ENST00000591436 DIP2BQ9P265 1576 aa38.38■■■■□ 3.73
TMC6-218ENST00000591436 KIAA0556O60303 1618 aa38.35■■■■□ 3.73
TMC6-218ENST00000591436 ABCC2Q92887 1545 aa38.34■■■■□ 3.73
TMC6-218ENST00000591436 UACAQ9BZF9 1416 aa38.32■■■■□ 3.73
TMC6-218ENST00000591436 UHRF1BP1LA0JNW5 1464 aa38.29■■■■□ 3.72
TMC6-218ENST00000591436 CSRNP3Q8WYN3 585 aa38.22■■■■□ 3.71
TMC6-218ENST00000591436 GOLGA3Q08378 1498 aa38.21■■■■□ 3.71
TMC6-218ENST00000591436 ASXL2Q76L83 1435 aa38.19■■■■□ 3.7
TMC6-218ENST00000591436 TSPOAP1O95153 1857 aa38.17■■■■□ 3.7
TMC6-218ENST00000591436 PLB1Q6P1J6 1458 aa38.16■■■■□ 3.7
TMC6-218ENST00000591436 KDM5BQ9UGL1 1544 aa38.12■■■■□ 3.69
TMC6-218ENST00000591436 EEA1Q15075 1411 aa38.11■■■■□ 3.69
TMC6-218ENST00000591436 ZCCHC11Q5TAX3 1644 aaKnown RBP38.08■■■■□ 3.69
TMC6-218ENST00000591436 GLI2P10070 1586 aa38.02■■■■□ 3.68
TMC6-218ENST00000591436 FAM9AQ8IZU1 332 aaPredicted RBP38.01■■■■□ 3.68
TMC6-218ENST00000591436 KDM6BO15054 1643 aa37.98■■■■□ 3.67
TMC6-218ENST00000591436 ABCA8O94911 1581 aa37.97■■■■□ 3.67
TMC6-218ENST00000591436 AEBP2Q6ZN18 517 aaPredicted RBP37.96■■■■□ 3.67
TMC6-218ENST00000591436 P3H3Q8IVL6 736 aa37.95■■■■□ 3.67
TMC6-218ENST00000591436 EPRSP07814 1512 aaKnown RBP37.95■■■■□ 3.67
TMC6-218ENST00000591436 PPRC1Q5VV67 1664 aaKnown RBP37.88■■■■□ 3.66
TMC6-218ENST00000591436 WDR7Q9Y4E6 1490 aa37.87■■■■□ 3.65
TMC6-218ENST00000591436 SAMD9Q5K651 1589 aa37.85■■■■□ 3.65
TMC6-218ENST00000591436 CHIC1Q5VXU3 224 aa37.83■■■■□ 3.65
TMC6-218ENST00000591436 MAP3K4Q9Y6R4 1608 aa37.83■■■■□ 3.65
TMC6-218ENST00000591436 RANGAP1P46060 587 aaPredicted RBP37.8■■■■□ 3.64
TMC6-218ENST00000591436 KIF21BO75037 1637 aa37.78■■■■□ 3.64
TMC6-218ENST00000591436 ARID3CA6NKF2 412 aa37.74■■■■□ 3.63
TMC6-218ENST00000591436 KCNH8Q96L42 1107 aa37.73■■■■□ 3.63
TMC6-218ENST00000591436 TEX14Q8IWB6 1497 aa37.72■■■■□ 3.63
TMC6-218ENST00000591436 ATP10BO94823 1461 aa37.66■■■■□ 3.62
TMC6-218ENST00000591436 RAPGEF6Q8TEU7 1601 aa37.65■■■■□ 3.62
TMC6-218ENST00000591436 FHOD3Q2V2M9 1422 aa37.64■■■■□ 3.62
TMC6-218ENST00000591436 EHMT2Q96KQ7 1210 aa37.62■■■■□ 3.61
TMC6-218ENST00000591436 CFAP43Q8NDM7 1665 aa37.62■■■■□ 3.61
TMC6-218ENST00000591436 CD109Q6YHK3 1445 aa37.61■■■■□ 3.61
TMC6-218ENST00000591436 COL17A1Q9UMD9 1497 aaPredicted RBP37.58■■■■□ 3.61
TMC6-218ENST00000591436 UBTFP17480 764 aaKnown RBP37.55■■■■□ 3.6
TMC6-218ENST00000591436 EFCAB5A4FU69 1503 aa37.55■■■■□ 3.6
TMC6-218ENST00000591436 MAGI3Q5TCQ9 1506 aa37.54■■■■□ 3.6
TMC6-218ENST00000591436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.53■■■■□ 3.6
TMC6-218ENST00000591436 HNRNPUL2Q1KMD3 747 aaKnown RBP37.53■■■■□ 3.6
TMC6-218ENST00000591436 NUP153P49790 1475 aaKnown RBP37.5■■■■□ 3.59
TMC6-218ENST00000591436 KDM4FA0A1W2PPD8 638 aa37.42■■■■□ 3.58
TMC6-218ENST00000591436 ABCA9Q8IUA7 1624 aa37.39■■■■□ 3.58
TMC6-218ENST00000591436 PLEKHD1A6NEE1 506 aa37.3■■■■□ 3.56
TMC6-218ENST00000591436 ARHGAP35Q9NRY4 1499 aa37.26■■■■□ 3.56
TMC6-218ENST00000591436 ARAP3Q8WWN8 1544 aa37.24■■■■□ 3.55
TMC6-218ENST00000591436 ADGRL1O94910 1474 aa37.22■■■■□ 3.55
TMC6-218ENST00000591436 FMN1Q68DA7 1419 aa37.22■■■■□ 3.55
TMC6-218ENST00000591436 PHLDB1Q86UU1 1377 aa37.2■■■■□ 3.55
TMC6-218ENST00000591436 CDK13Q14004 1512 aaKnown RBP37.2■■■■□ 3.55
TMC6-218ENST00000591436 ATP1B4Q9UN42 357 aaPredicted RBP37.19■■■■□ 3.54
TMC6-218ENST00000591436 NEO1Q92859 1461 aa37.16■■■■□ 3.54
TMC6-218ENST00000591436 HECW1Q76N89 1606 aa37.14■■■■□ 3.54
TMC6-218ENST00000591436 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.1■■■■□ 3.532e-7■□□□□ 9.9
TMC6-218ENST00000591436 RAPGEF3O95398 923 aa37.07■■■■□ 3.52
TMC6-218ENST00000591436 TTC37Q6PGP7 1564 aa37.05■■■■□ 3.52
TMC6-218ENST00000591436 FANCAO15360 1455 aa37■■■■□ 3.51
TMC6-218ENST00000591436 CDK11AQ9UQ88 783 aaPredicted RBP36.99■■■■□ 3.51
TMC6-218ENST00000591436 CFAP74Q9C0B2 1584 aa36.98■■■■□ 3.51
TMC6-218ENST00000591436 AKNAQ7Z591 1439 aa36.96■■■■□ 3.51
TMC6-218ENST00000591436 FRMPD1Q5SYB0 1578 aa36.95■■■■□ 3.51
TMC6-218ENST00000591436 DENND4BO75064 1496 aaPredicted RBP36.92■■■■□ 3.5
TMC6-218ENST00000591436 LRRIQ1Q96JM4 1722 aa36.91■■■■□ 3.5
TMC6-218ENST00000591436 RICTORQ6R327 1708 aa36.87■■■■□ 3.49
TMC6-218ENST00000591436 PLCH2O75038 1416 aa36.86■■■■□ 3.49
TMC6-218ENST00000591436 PCF11O94913 1555 aaKnown RBP36.86■■■■□ 3.49
TMC6-218ENST00000591436 TROQ12816 1431 aaPredicted RBP36.85■■■■□ 3.49
TMC6-218ENST00000591436 KIF14Q15058 1648 aa36.85■■■■□ 3.49
TMC6-218ENST00000591436 CASKIN1Q8WXD9 1431 aa36.85■■■■□ 3.49
TMC6-218ENST00000591436 CLIP1P30622 1438 aa36.84■■■■□ 3.49
TMC6-218ENST00000591436 MYO5CQ9NQX4 1742 aa36.82■■■■□ 3.49
TMC6-218ENST00000591436 CCDC18Q5T9S5 1454 aa36.78■■■■□ 3.48
TMC6-218ENST00000591436 ARHGEF40Q8TER5 1519 aa36.76■■■■□ 3.48
TMC6-218ENST00000591436 EFCAB2Q5VUJ9 269 aa36.75■■■■□ 3.47
TMC6-218ENST00000591436 ARID4BQ4LE39 1312 aaPredicted RBP36.74■■■■□ 3.47
TMC6-218ENST00000591436 SCAPERQ9BY12 1400 aa36.74■■■■□ 3.47
TMC6-218ENST00000591436 FYCO1Q9BQS8 1478 aa36.73■■■■□ 3.47
TMC6-218ENST00000591436 ZMYM4Q5VZL5 1548 aa36.71■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms