RNA–Protein interactions for RNA: ENST00000591396.5

SPC24-205, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC24, Length 832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-205ENST00000591396 ARAP1Q96P48 1450 aa24.77■■□□□ 1.56
SPC24-205ENST00000591396 RAPGEF2Q9Y4G8 1499 aa24.77■■□□□ 1.56
SPC24-205ENST00000591396 SHROOM2Q13796 1616 aa24.75■■□□□ 1.55
SPC24-205ENST00000591396 EEA1Q15075 1411 aa24.74■■□□□ 1.55
SPC24-205ENST00000591396 CSRNP3Q8WYN3 585 aa24.7■■□□□ 1.54
SPC24-205ENST00000591396 PRXQ9BXM0 1461 aa24.7■■□□□ 1.54
SPC24-205ENST00000591396 PRG4Q92954 1404 aaPredicted RBP24.68■■□□□ 1.54
SPC24-205ENST00000591396 ERCC6L2Q5T890 1561 aa24.61■■□□□ 1.53
SPC24-205ENST00000591396 IQGAP2Q13576 1575 aa24.55■■□□□ 1.52
SPC24-205ENST00000591396 CARMIL2Q6F5E8 1435 aa24.52■■□□□ 1.52
SPC24-205ENST00000591396 FAM9AQ8IZU1 332 aaPredicted RBP24.48■■□□□ 1.51
SPC24-205ENST00000591396 UGGT2Q9NYU1 1516 aa24.48■■□□□ 1.51
SPC24-205ENST00000591396 TNIKQ9UKE5 1360 aa24.43■■□□□ 1.5
SPC24-205ENST00000591396 PTPRGP23470 1445 aa24.42■■□□□ 1.5
SPC24-205ENST00000591396 DISP1Q96F81 1524 aa24.41■■□□□ 1.5
SPC24-205ENST00000591396 CTTNBP2Q8WZ74 1663 aa24.38■■□□□ 1.49
SPC24-205ENST00000591396 KIF21BO75037 1637 aa24.37■■□□□ 1.49
SPC24-205ENST00000591396 GOLGA3Q08378 1498 aa24.37■■□□□ 1.49
SPC24-205ENST00000591396 KIAA0556O60303 1618 aa24.31■■□□□ 1.48
SPC24-205ENST00000591396 NPM1P06748 294 aaKnown RBP eCLIP24.3■■□□□ 1.48
SPC24-205ENST00000591396 TRHP20396 242 aaPredicted RBP24.26■■□□□ 1.47
SPC24-205ENST00000591396 UACAQ9BZF9 1416 aa24.25■■□□□ 1.47
SPC24-205ENST00000591396 UHRF1BP1LA0JNW5 1464 aa24.25■■□□□ 1.47
SPC24-205ENST00000591396 ADCY10Q96PN6 1610 aa24.23■■□□□ 1.47
SPC24-205ENST00000591396 TTBK1Q5TCY1 1321 aaPredicted RBP24.22■■□□□ 1.47
SPC24-205ENST00000591396 UBTFP17480 764 aaKnown RBP24.21■■□□□ 1.47
SPC24-205ENST00000591396 ABCC2Q92887 1545 aa24.18■■□□□ 1.46
SPC24-205ENST00000591396 SAMD9Q5K651 1589 aa24.16■■□□□ 1.46
SPC24-205ENST00000591396 MAPKBP1O60336 1514 aa24.15■■□□□ 1.46
SPC24-205ENST00000591396 P3H3Q8IVL6 736 aa24.12■■□□□ 1.45
SPC24-205ENST00000591396 EFCAB5A4FU69 1503 aa24.1■■□□□ 1.45
SPC24-205ENST00000591396 KDM5BQ9UGL1 1544 aa24.1■■□□□ 1.45
SPC24-205ENST00000591396 PLB1Q6P1J6 1458 aa24.09■■□□□ 1.45
SPC24-205ENST00000591396 ABCA8O94911 1581 aa24.08■■□□□ 1.44
SPC24-205ENST00000591396 EHMT2Q96KQ7 1210 aa24.07■■□□□ 1.44
SPC24-205ENST00000591396 RANGAP1P46060 587 aaPredicted RBP24.06■■□□□ 1.44
SPC24-205ENST00000591396 ABCC10Q5T3U5 1492 aa24.06■■□□□ 1.44
SPC24-205ENST00000591396 FAM69CQ0P6D2 419 aa24.01■■□□□ 1.43
SPC24-205ENST00000591396 FHOD3Q2V2M9 1422 aa24.01■■□□□ 1.43
SPC24-205ENST00000591396 ASXL2Q76L83 1435 aa24.01■■□□□ 1.43
SPC24-205ENST00000591396 ARHGAP35Q9NRY4 1499 aa23.95■■□□□ 1.42
SPC24-205ENST00000591396 DIP2BQ9P265 1576 aa23.95■■□□□ 1.42
SPC24-205ENST00000591396 ZCCHC11Q5TAX3 1644 aaKnown RBP23.94■■□□□ 1.42
SPC24-205ENST00000591396 FMN1Q68DA7 1419 aa23.92■■□□□ 1.42
SPC24-205ENST00000591396 ATP10BO94823 1461 aa23.91■■□□□ 1.42
SPC24-205ENST00000591396 RAPGEF6Q8TEU7 1601 aa23.91■■□□□ 1.42
SPC24-205ENST00000591396 KIF13AQ9H1H9 1805 aa23.89■■□□□ 1.42
SPC24-205ENST00000591396 WDR7Q9Y4E6 1490 aa23.89■■□□□ 1.42
SPC24-205ENST00000591396 GLI2P10070 1586 aa23.89■■□□□ 1.41
SPC24-205ENST00000591396 EPRSP07814 1512 aaKnown RBP23.87■■□□□ 1.41
SPC24-205ENST00000591396 NUP153P49790 1475 aaKnown RBP23.87■■□□□ 1.41
SPC24-205ENST00000591396 CLIP1P30622 1438 aa23.83■■□□□ 1.4
SPC24-205ENST00000591396 ARID3CA6NKF2 412 aa23.79■■□□□ 1.4
SPC24-205ENST00000591396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.78■■□□□ 1.4
SPC24-205ENST00000591396 HNRNPUL2Q1KMD3 747 aaKnown RBP23.78■■□□□ 1.4
SPC24-205ENST00000591396 PLEKHD1A6NEE1 506 aa23.76■■□□□ 1.39
SPC24-205ENST00000591396 KCNH8Q96L42 1107 aa23.76■■□□□ 1.39
SPC24-205ENST00000591396 LOC105371045A0A1W2PR82 267 aa23.73■■□□□ 1.39
SPC24-205ENST00000591396 HECW1Q76N89 1606 aa23.71■■□□□ 1.39
SPC24-205ENST00000591396 CASKIN1Q8WXD9 1431 aa23.71■■□□□ 1.39
SPC24-205ENST00000591396 CEP162Q5TB80 1403 aa23.7■■□□□ 1.38
SPC24-205ENST00000591396 CDK11AQ9UQ88 783 aaPredicted RBP23.7■■□□□ 1.38
SPC24-205ENST00000591396 MAP3K4Q9Y6R4 1608 aa23.7■■□□□ 1.38
SPC24-205ENST00000591396 CD109Q6YHK3 1445 aa23.69■■□□□ 1.38
SPC24-205ENST00000591396 ATP1B4Q9UN42 357 aaPredicted RBP23.69■■□□□ 1.38
SPC24-205ENST00000591396 TEX14Q8IWB6 1497 aa23.68■■□□□ 1.38
SPC24-205ENST00000591396 MAGI3Q5TCQ9 1506 aa23.67■■□□□ 1.38
SPC24-205ENST00000591396 CDK13Q14004 1512 aaKnown RBP23.64■■□□□ 1.37
SPC24-205ENST00000591396 CFAP43Q8NDM7 1665 aa23.64■■□□□ 1.37
SPC24-205ENST00000591396 FYCO1Q9BQS8 1478 aa23.63■■□□□ 1.37
SPC24-205ENST00000591396 PPRC1Q5VV67 1664 aaKnown RBP23.61■■□□□ 1.37
SPC24-205ENST00000591396 ABCA9Q8IUA7 1624 aa23.61■■□□□ 1.37
SPC24-205ENST00000591396 CCDC18Q5T9S5 1454 aa23.61■■□□□ 1.37
SPC24-205ENST00000591396 TSPOAP1O95153 1857 aa23.6■■□□□ 1.37
SPC24-205ENST00000591396 PCF11O94913 1555 aaKnown RBP23.58■■□□□ 1.37
SPC24-205ENST00000591396 PHLDB1Q86UU1 1377 aa23.58■■□□□ 1.37
SPC24-205ENST00000591396 TROQ12816 1431 aaPredicted RBP23.55■■□□□ 1.36
SPC24-205ENST00000591396 KDM6BO15054 1643 aa23.55■■□□□ 1.36
SPC24-205ENST00000591396 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.5■■□□□ 1.35
SPC24-205ENST00000591396 NEO1Q92859 1461 aa23.49■■□□□ 1.35
SPC24-205ENST00000591396 COL17A1Q9UMD9 1497 aaPredicted RBP23.49■■□□□ 1.35
SPC24-205ENST00000591396 ARAP3Q8WWN8 1544 aa23.46■■□□□ 1.35
SPC24-205ENST00000591396 LRRIQ1Q96JM4 1722 aa23.46■■□□□ 1.35
SPC24-205ENST00000591396 VPS8Q8N3P4 1428 aa23.45■■□□□ 1.34
SPC24-205ENST00000591396 PLCH2O75038 1416 aa23.44■■□□□ 1.34
SPC24-205ENST00000591396 KIF14Q15058 1648 aa23.41■■□□□ 1.34
SPC24-205ENST00000591396 TTC37Q6PGP7 1564 aa23.41■■□□□ 1.34
SPC24-205ENST00000591396 FANCAO15360 1455 aa23.39■■□□□ 1.34
SPC24-205ENST00000591396 EFCAB2Q5VUJ9 269 aa23.38■■□□□ 1.33
SPC24-205ENST00000591396 AKNAQ7Z591 1439 aa23.37■■□□□ 1.33
SPC24-205ENST00000591396 MTUS2Q5JR59 1369 aa23.36■■□□□ 1.33
SPC24-205ENST00000591396 CFAP74Q9C0B2 1584 aa23.35■■□□□ 1.33
SPC24-205ENST00000591396 DENND4BO75064 1496 aaPredicted RBP23.3■■□□□ 1.32
SPC24-205ENST00000591396 MAP3K1Q13233 1512 aa23.3■■□□□ 1.32
SPC24-205ENST00000591396 RAPGEF3O95398 923 aa23.29■■□□□ 1.32
SPC24-205ENST00000591396 MYO5CQ9NQX4 1742 aa23.28■■□□□ 1.32
SPC24-205ENST00000591396 EHBP1L1Q8N3D4 1523 aa23.28■■□□□ 1.32
SPC24-205ENST00000591396 ADGRL1O94910 1474 aa23.26■■□□□ 1.31
SPC24-205ENST00000591396 ARHGAP5Q13017 1502 aa23.26■■□□□ 1.31
SPC24-205ENST00000591396 SCAPERQ9BY12 1400 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms