RNA–Protein interactions for RNA: ENST00000591327.2

GFAP-218, Transcript of glial fibrillary acidic protein, humanhuman

TSL 1 (best)

Gene GFAP, Length 3,255 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-218ENST00000591327 P3H3Q8IVL6 736 aa17.86■□□□□ 0.45
GFAP-218ENST00000591327 CCNB3Q8WWL7 1395 aa17.85■□□□□ 0.45
GFAP-218ENST00000591327 BCANQ96GW7 911 aa17.85■□□□□ 0.45
GFAP-218ENST00000591327 ABCA10Q8WWZ4 1543 aa17.85■□□□□ 0.45
GFAP-218ENST00000591327 ITGAEP38570 1179 aa17.84■□□□□ 0.45
GFAP-218ENST00000591327 DNAJC5BQ9UF47 199 aa17.83■□□□□ 0.44
GFAP-218ENST00000591327 TIAM1Q13009 1591 aa17.83■□□□□ 0.44
GFAP-218ENST00000591327 MIER1Q8N108 512 aa17.82■□□□□ 0.44
GFAP-218ENST00000591327 URB2Q14146 1524 aaKnown RBP17.78■□□□□ 0.44
GFAP-218ENST00000591327 ATP1B4Q9UN42 357 aaPredicted RBP17.77■□□□□ 0.43
GFAP-218ENST00000591327 FHOD3Q2V2M9 1422 aa17.77■□□□□ 0.43
GFAP-218ENST00000591327 LRRC9Q6ZRR7 1453 aa17.76■□□□□ 0.43
GFAP-218ENST00000591327 MAP3K1Q13233 1512 aa17.76■□□□□ 0.43
GFAP-218ENST00000591327 CLSPNQ9HAW4 1339 aa17.75■□□□□ 0.43
GFAP-218ENST00000591327 PCF11O94913 1555 aaKnown RBP17.75■□□□□ 0.43
GFAP-218ENST00000591327 LAMC3Q9Y6N6 1575 aa17.75■□□□□ 0.43
GFAP-218ENST00000591327 FHAD1B1AJZ9 1412 aa17.74■□□□□ 0.43
GFAP-218ENST00000591327 PHLDB1Q86UU1 1377 aa17.74■□□□□ 0.43
GFAP-218ENST00000591327 TDRD9Q8NDG6 1382 aaKnown RBP17.72■□□□□ 0.43
GFAP-218ENST00000591327 CUL7Q14999 1698 aa17.71■□□□□ 0.43
GFAP-218ENST00000591327 WDR97A6NE52 1622 aa17.69■□□□□ 0.42
GFAP-218ENST00000591327 CFAP43Q8NDM7 1665 aa17.68■□□□□ 0.42
GFAP-218ENST00000591327 RAB3GAP2Q9H2M9 1393 aa17.68■□□□□ 0.42
GFAP-218ENST00000591327 FAM50AQ14320 339 aaKnown RBP17.67■□□□□ 0.42
GFAP-218ENST00000591327 CTTNBP2Q8WZ74 1663 aa17.67■□□□□ 0.42
GFAP-218ENST00000591327 EFCAB5A4FU69 1503 aa17.65■□□□□ 0.42
GFAP-218ENST00000591327 PDS5BQ9NTI5 1447 aa17.65■□□□□ 0.42
GFAP-218ENST00000591327 TSHZ2Q9NRE2 1034 aa17.65■□□□□ 0.42
GFAP-218ENST00000591327 ABCA5Q8WWZ7 1642 aa17.64■□□□□ 0.41
GFAP-218ENST00000591327 FYCO1Q9BQS8 1478 aa17.64■□□□□ 0.41
GFAP-218ENST00000591327 CASKIN1Q8WXD9 1431 aa17.63■□□□□ 0.41
GFAP-218ENST00000591327 GAPVD1Q14C86 1478 aa17.63■□□□□ 0.41
GFAP-218ENST00000591327 KIF21AQ7Z4S6 1674 aa17.63■□□□□ 0.41
GFAP-218ENST00000591327 SETD5Q9C0A6 1442 aa17.6■□□□□ 0.41
GFAP-218ENST00000591327 SUPT16HQ9Y5B9 1047 aaKnown RBP17.59■□□□□ 0.41
GFAP-218ENST00000591327 MAPKBP1O60336 1514 aa17.59■□□□□ 0.41
GFAP-218ENST00000591327 AQRO60306 1485 aaKnown RBP eCLIP17.59■□□□□ 0.41
GFAP-218ENST00000591327 SNAPC4Q5SXM2 1469 aa17.57■□□□□ 0.4
GFAP-218ENST00000591327 FMN1Q68DA7 1419 aa17.56■□□□□ 0.4
GFAP-218ENST00000591327 TARBP1Q13395 1621 aaKnown RBP17.53■□□□□ 0.4
GFAP-218ENST00000591327 SAMD9Q5K651 1589 aa17.53■□□□□ 0.4
GFAP-218ENST00000591327 SIN3AQ96ST3 1273 aa17.5■□□□□ 0.39
GFAP-218ENST00000591327 LRRIQ1Q96JM4 1722 aa17.5■□□□□ 0.39
GFAP-218ENST00000591327 MTUS2Q5JR59 1369 aa17.49■□□□□ 0.39
GFAP-218ENST00000591327 FGD6Q6ZV73 1430 aa17.48■□□□□ 0.39
GFAP-218ENST00000591327 GRIN2BQ13224 1484 aa17.47■□□□□ 0.39
GFAP-218ENST00000591327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.45■□□□□ 0.38
GFAP-218ENST00000591327 PBRM1Q86U86 1689 aa17.43■□□□□ 0.38
GFAP-218ENST00000591327 PTPRKQ15262 1439 aa17.42■□□□□ 0.38
GFAP-218ENST00000591327 NCOA2Q15596 1464 aa17.42■□□□□ 0.38
GFAP-218ENST00000591327 ERICH6Q7L0X2 663 aa17.4■□□□□ 0.38
GFAP-218ENST00000591327 ANO8Q9HCE9 1232 aaPredicted RBP17.4■□□□□ 0.38
GFAP-218ENST00000591327 MRC2Q9UBG0 1479 aa17.4■□□□□ 0.38
GFAP-218ENST00000591327 MAGI3Q5TCQ9 1506 aa17.38■□□□□ 0.37
GFAP-218ENST00000591327 ADAMTS12P58397 1594 aa17.37■□□□□ 0.37
GFAP-218ENST00000591327 MYOM3Q5VTT5 1437 aa17.37■□□□□ 0.37
GFAP-218ENST00000591327 THOC2Q8NI27 1593 aaKnown RBP17.37■□□□□ 0.37
GFAP-218ENST00000591327 ZNF608Q9ULD9 1512 aaPredicted RBP17.36■□□□□ 0.37
GFAP-218ENST00000591327 CCDC136Q96JN2 1154 aa17.35■□□□□ 0.37
GFAP-218ENST00000591327 IQGAP2Q13576 1575 aa17.35■□□□□ 0.37
GFAP-218ENST00000591327 EHBP1L1Q8N3D4 1523 aa17.35■□□□□ 0.37
GFAP-218ENST00000591327 SUPT6HQ7KZ85 1726 aaKnown RBP17.35■□□□□ 0.37
GFAP-218ENST00000591327 ARID3CA6NKF2 412 aa17.35■□□□□ 0.37
GFAP-218ENST00000591327 CCDC18Q5T9S5 1454 aa17.34■□□□□ 0.37
GFAP-218ENST00000591327 HFM1A2PYH4 1435 aa17.33■□□□□ 0.36
GFAP-218ENST00000591327 FKBP8Q14318 412 aa17.32■□□□□ 0.36
GFAP-218ENST00000591327 UGGT2Q9NYU1 1516 aa17.32■□□□□ 0.36
GFAP-218ENST00000591327 PTPN23Q9H3S7 1636 aa17.31■□□□□ 0.36
GFAP-218ENST00000591327 ARHGEF11O15085 1522 aa17.3■□□□□ 0.36
GFAP-218ENST00000591327 NAIPQ13075 1403 aa17.3■□□□□ 0.36
GFAP-218ENST00000591327 CDK13Q14004 1512 aaKnown RBP17.29■□□□□ 0.36
GFAP-218ENST00000591327 EPRSP07814 1512 aaKnown RBP17.29■□□□□ 0.36
GFAP-218ENST00000591327 HECW1Q76N89 1606 aa17.29■□□□□ 0.36
GFAP-218ENST00000591327 HIRIP3Q9BW71 556 aaPredicted RBP17.29■□□□□ 0.36
GFAP-218ENST00000591327 PPP1R15AO75807 674 aaPredicted RBP17.28■□□□□ 0.36
GFAP-218ENST00000591327 IFT140Q96RY7 1462 aa17.27■□□□□ 0.36
GFAP-218ENST00000591327 CHIC2Q9UKJ5 165 aa17.27■□□□□ 0.36
GFAP-218ENST00000591327 UACAQ9BZF9 1416 aa17.27■□□□□ 0.35
GFAP-218ENST00000591327 TIMELESSQ9UNS1 1208 aa17.27■□□□□ 0.35
GFAP-218ENST00000591327 RRP7BPQ9NSQ0 103 aa17.26■□□□□ 0.35
GFAP-218ENST00000591327 RBM19Q9Y4C8 960 aaKnown RBP17.26■□□□□ 0.35
GFAP-218ENST00000591327 KCNH8Q96L42 1107 aa17.25■□□□□ 0.35
GFAP-218ENST00000591327 WDR62O43379 1518 aa17.25■□□□□ 0.35
GFAP-218ENST00000591327 DDX10Q13206 875 aaKnown RBP17.25■□□□□ 0.35
GFAP-218ENST00000591327 RTN4Q9NQC3 1192 aaKnown RBP17.22■□□□□ 0.35
GFAP-218ENST00000591327 TONSLQ96HA7 1378 aa17.22■□□□□ 0.35
GFAP-218ENST00000591327 TCOF1Q13428 1488 aaKnown RBP17.21■□□□□ 0.35
GFAP-218ENST00000591327 DISP1Q96F81 1524 aa17.2■□□□□ 0.34
GFAP-218ENST00000591327 KIAA0586Q9BVV6 1533 aa17.19■□□□□ 0.34
GFAP-218ENST00000591327 EIF4G3O43432 1585 aaKnown RBP17.19■□□□□ 0.34
GFAP-218ENST00000591327 KIAA0556O60303 1618 aa17.17■□□□□ 0.34
GFAP-218ENST00000591327 GRIN2AQ12879 1464 aa17.17■□□□□ 0.34
GFAP-218ENST00000591327 KDM6BO15054 1643 aa17.17■□□□□ 0.34
GFAP-218ENST00000591327 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.16■□□□□ 0.34
GFAP-218ENST00000591327 ERCC6Q03468 1493 aa17.16■□□□□ 0.34
GFAP-218ENST00000591327 NBR1Q14596 966 aa17.15■□□□□ 0.34
GFAP-218ENST00000591327 TRIM52Q96A61 297 aa17.15■□□□□ 0.34
GFAP-218ENST00000591327 MIA2Q96PC5 1412 aa17.14■□□□□ 0.33
GFAP-218ENST00000591327 DENND4BO75064 1496 aaPredicted RBP17.14■□□□□ 0.33
GFAP-218ENST00000591327 NUP153P49790 1475 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms