RNA–Protein interactions for RNA: ENST00000590953.5

RANBP3-219, Transcript of RAN binding protein 3, humanhuman

TSL 3

Gene RANBP3, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-219ENST00000590953 JPH4Q96JJ6 628 aa16.29■□□□□ 0.2
RANBP3-219ENST00000590953 ARHGEF11O15085 1522 aa16.28■□□□□ 0.2
RANBP3-219ENST00000590953 SHROOM2Q13796 1616 aa16.27■□□□□ 0.2
RANBP3-219ENST00000590953 IQGAP2Q13576 1575 aa16.27■□□□□ 0.2
RANBP3-219ENST00000590953 GOLGA3Q08378 1498 aa16.26■□□□□ 0.19
RANBP3-219ENST00000590953 CTTNBP2Q8WZ74 1663 aa16.25■□□□□ 0.19
RANBP3-219ENST00000590953 RIMBP3CA6NJZ7 1639 aa16.25■□□□□ 0.19
RANBP3-219ENST00000590953 RIMBP3BA6NNM3 1639 aa16.25■□□□□ 0.19
RANBP3-219ENST00000590953 RIMBP3Q9UFD9 1639 aa16.25■□□□□ 0.19
RANBP3-219ENST00000590953 PRG4Q92954 1404 aaPredicted RBP16.23■□□□□ 0.19
RANBP3-219ENST00000590953 UBTFP17480 764 aaKnown RBP16.21■□□□□ 0.19
RANBP3-219ENST00000590953 EHMT2Q96KQ7 1210 aa16.2■□□□□ 0.18
RANBP3-219ENST00000590953 UGGT2Q9NYU1 1516 aa16.19■□□□□ 0.18
RANBP3-219ENST00000590953 CARMIL2Q6F5E8 1435 aa16.19■□□□□ 0.18
RANBP3-219ENST00000590953 ERCC6L2Q5T890 1561 aa16.17■□□□□ 0.18
RANBP3-219ENST00000590953 ARAP1Q96P48 1450 aa16.16■□□□□ 0.18
RANBP3-219ENST00000590953 CYB5RLQ6IPT4 315 aa16.14■□□□□ 0.17
RANBP3-219ENST00000590953 DISP1Q96F81 1524 aa16.13■□□□□ 0.17
RANBP3-219ENST00000590953 TNIKQ9UKE5 1360 aa16.11■□□□□ 0.17
RANBP3-219ENST00000590953 KIAA0556O60303 1618 aa16.1■□□□□ 0.17
RANBP3-219ENST00000590953 RANGAP1P46060 587 aaPredicted RBP16.08■□□□□ 0.16
RANBP3-219ENST00000590953 PTPRGP23470 1445 aa16.08■□□□□ 0.16
RANBP3-219ENST00000590953 SAMD9Q5K651 1589 aa16.06■□□□□ 0.16
RANBP3-219ENST00000590953 EFCAB5A4FU69 1503 aa16.05■□□□□ 0.16
RANBP3-219ENST00000590953 TTBK1Q5TCY1 1321 aaPredicted RBP16.03■□□□□ 0.16
RANBP3-219ENST00000590953 LOC105371045A0A1W2PR82 267 aa16.03■□□□□ 0.16
RANBP3-219ENST00000590953 P3H3Q8IVL6 736 aa16.03■□□□□ 0.16
RANBP3-219ENST00000590953 FHOD3Q2V2M9 1422 aa15.98■□□□□ 0.15
RANBP3-219ENST00000590953 ARHGAP35Q9NRY4 1499 aa15.97■□□□□ 0.15
RANBP3-219ENST00000590953 UACAQ9BZF9 1416 aa15.97■□□□□ 0.15
RANBP3-219ENST00000590953 CLIP1P30622 1438 aa15.96■□□□□ 0.15
RANBP3-219ENST00000590953 UHRF1BP1LA0JNW5 1464 aa15.95■□□□□ 0.14
RANBP3-219ENST00000590953 NPM1P06748 294 aaKnown RBP eCLIP15.94■□□□□ 0.14
RANBP3-219ENST00000590953 ADCY10Q96PN6 1610 aa15.94■□□□□ 0.14
RANBP3-219ENST00000590953 CEP162Q5TB80 1403 aa15.94■□□□□ 0.14
RANBP3-219ENST00000590953 ABCC2Q92887 1545 aa15.93■□□□□ 0.14
RANBP3-219ENST00000590953 PLB1Q6P1J6 1458 aa15.92■□□□□ 0.14
RANBP3-219ENST00000590953 FMN1Q68DA7 1419 aa15.92■□□□□ 0.14
RANBP3-219ENST00000590953 ABCA8O94911 1581 aa15.92■□□□□ 0.14
RANBP3-219ENST00000590953 RAPGEF6Q8TEU7 1601 aa15.87■□□□□ 0.13
RANBP3-219ENST00000590953 KDM5BQ9UGL1 1544 aa15.86■□□□□ 0.13
RANBP3-219ENST00000590953 MAPKBP1O60336 1514 aa15.83■□□□□ 0.12
RANBP3-219ENST00000590953 NUP153P49790 1475 aaKnown RBP15.81■□□□□ 0.12
RANBP3-219ENST00000590953 ZCCHC11Q5TAX3 1644 aaKnown RBP15.81■□□□□ 0.12
RANBP3-219ENST00000590953 ATP1B4Q9UN42 357 aaPredicted RBP15.8■□□□□ 0.12
RANBP3-219ENST00000590953 HECW1Q76N89 1606 aa15.79■□□□□ 0.12
RANBP3-219ENST00000590953 ATP10BO94823 1461 aa15.79■□□□□ 0.12
RANBP3-219ENST00000590953 CASKIN1Q8WXD9 1431 aa15.79■□□□□ 0.12
RANBP3-219ENST00000590953 ARID3CA6NKF2 412 aa15.78■□□□□ 0.12
RANBP3-219ENST00000590953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.78■□□□□ 0.12
RANBP3-219ENST00000590953 HNRNPUL2Q1KMD3 747 aaKnown RBP15.78■□□□□ 0.12
RANBP3-219ENST00000590953 ASXL2Q76L83 1435 aa15.77■□□□□ 0.12
RANBP3-219ENST00000590953 FYCO1Q9BQS8 1478 aa15.77■□□□□ 0.11
RANBP3-219ENST00000590953 TRHP20396 242 aaPredicted RBP15.76■□□□□ 0.11
RANBP3-219ENST00000590953 PCF11O94913 1555 aaKnown RBP15.75■□□□□ 0.11
RANBP3-219ENST00000590953 EPRSP07814 1512 aaKnown RBP15.74■□□□□ 0.11
RANBP3-219ENST00000590953 VPS8Q8N3P4 1428 aa15.74■□□□□ 0.11
RANBP3-219ENST00000590953 ABCC10Q5T3U5 1492 aa15.72■□□□□ 0.11
RANBP3-219ENST00000590953 CCDC18Q5T9S5 1454 aa15.72■□□□□ 0.11
RANBP3-219ENST00000590953 WDR7Q9Y4E6 1490 aa15.72■□□□□ 0.11
RANBP3-219ENST00000590953 CDK11AQ9UQ88 783 aaPredicted RBP15.72■□□□□ 0.11
RANBP3-219ENST00000590953 PLEKHD1A6NEE1 506 aa15.71■□□□□ 0.11
RANBP3-219ENST00000590953 CDK13Q14004 1512 aaKnown RBP15.71■□□□□ 0.11
RANBP3-219ENST00000590953 FAM69CQ0P6D2 419 aa15.7■□□□□ 0.1
RANBP3-219ENST00000590953 DIP2BQ9P265 1576 aa15.69■□□□□ 0.1
RANBP3-219ENST00000590953 KCNH8Q96L42 1107 aa15.67■□□□□ 0.1
RANBP3-219ENST00000590953 LRRIQ1Q96JM4 1722 aa15.66■□□□□ 0.1
RANBP3-219ENST00000590953 GLI2P10070 1586 aa15.66■□□□□ 0.1
RANBP3-219ENST00000590953 KIF13AQ9H1H9 1805 aa15.65■□□□□ 0.1
RANBP3-219ENST00000590953 TROQ12816 1431 aaPredicted RBP15.62■□□□□ 0.09
RANBP3-219ENST00000590953 APLP2Q06481 763 aa15.61■□□□□ 0.09
RANBP3-219ENST00000590953 MTUS2Q5JR59 1369 aa15.59■□□□□ 0.09
RANBP3-219ENST00000590953 MAP3K1Q13233 1512 aa15.58■□□□□ 0.09
RANBP3-219ENST00000590953 CFAP43Q8NDM7 1665 aa15.58■□□□□ 0.08
RANBP3-219ENST00000590953 CD109Q6YHK3 1445 aa15.58■□□□□ 0.08
RANBP3-219ENST00000590953 TIAM1Q13009 1591 aa15.58■□□□□ 0.08
RANBP3-219ENST00000590953 MAP3K4Q9Y6R4 1608 aa15.57■□□□□ 0.08
RANBP3-219ENST00000590953 KIF14Q15058 1648 aa15.57■□□□□ 0.08
RANBP3-219ENST00000590953 ABCA9Q8IUA7 1624 aa15.57■□□□□ 0.08
RANBP3-219ENST00000590953 MAGI3Q5TCQ9 1506 aa15.56■□□□□ 0.08
RANBP3-219ENST00000590953 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.55■□□□□ 0.087e-8■□□□□ 9
RANBP3-219ENST00000590953 EHBP1L1Q8N3D4 1523 aa15.54■□□□□ 0.08
RANBP3-219ENST00000590953 TEX14Q8IWB6 1497 aa15.53■□□□□ 0.08
RANBP3-219ENST00000590953 TSPOAP1O95153 1857 aa15.53■□□□□ 0.08
RANBP3-219ENST00000590953 LRRC9Q6ZRR7 1453 aa15.52■□□□□ 0.07
RANBP3-219ENST00000590953 TTC37Q6PGP7 1564 aa15.51■□□□□ 0.07
RANBP3-219ENST00000590953 PPRC1Q5VV67 1664 aaKnown RBP15.5■□□□□ 0.07
RANBP3-219ENST00000590953 KANK4Q5T7N3 995 aaPredicted RBP15.48■□□□□ 0.07
RANBP3-219ENST00000590953 PLCH2O75038 1416 aa15.48■□□□□ 0.07
RANBP3-219ENST00000590953 SUPT6HQ7KZ85 1726 aaKnown RBP15.47■□□□□ 0.07
RANBP3-219ENST00000590953 PHLDB1Q86UU1 1377 aa15.47■□□□□ 0.07
RANBP3-219ENST00000590953 MYO5CQ9NQX4 1742 aa15.46■□□□□ 0.07
RANBP3-219ENST00000590953 ARAP3Q8WWN8 1544 aa15.46■□□□□ 0.07
RANBP3-219ENST00000590953 CCNB3Q8WWL7 1395 aa15.46■□□□□ 0.07
RANBP3-219ENST00000590953 NEO1Q92859 1461 aa15.46■□□□□ 0.06
RANBP3-219ENST00000590953 CFAP74Q9C0B2 1584 aa15.45■□□□□ 0.06
RANBP3-219ENST00000590953 EFCAB2Q5VUJ9 269 aa15.44■□□□□ 0.06
RANBP3-219ENST00000590953 FANCAO15360 1455 aa15.44■□□□□ 0.06
RANBP3-219ENST00000590953 NCOA2Q15596 1464 aa15.44■□□□□ 0.06
RANBP3-219ENST00000590953 ARHGAP5Q13017 1502 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms