RNA–Protein interactions for RNA: ENST00000590935.1

DUSP3-204, Transcript of dual specificity phosphatase 3, humanhuman

TSL 5

Gene DUSP3, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP3-204ENST00000590935 CLIP1P30622 1438 aa13.7□□□□□ -0.22
DUSP3-204ENST00000590935 P3H3Q8IVL6 736 aa13.66□□□□□ -0.22
DUSP3-204ENST00000590935 ADAMTS12P58397 1594 aa13.65□□□□□ -0.22
DUSP3-204ENST00000590935 MAGI1Q96QZ7 1491 aaPredicted RBP13.64□□□□□ -0.23
DUSP3-204ENST00000590935 SYNJ2O15056 1496 aa13.62□□□□□ -0.23
DUSP3-204ENST00000590935 GRIN2AQ12879 1464 aa13.6□□□□□ -0.23
DUSP3-204ENST00000590935 ARHGAP35Q9NRY4 1499 aa13.56□□□□□ -0.24
DUSP3-204ENST00000590935 TTBK1Q5TCY1 1321 aaPredicted RBP13.55□□□□□ -0.24
DUSP3-204ENST00000590935 ARAP1Q96P48 1450 aa13.54□□□□□ -0.24
DUSP3-204ENST00000590935 ATP1B4Q9UN42 357 aaPredicted RBP13.53□□□□□ -0.24
DUSP3-204ENST00000590935 CTTNBP2Q8WZ74 1663 aa13.52□□□□□ -0.24
DUSP3-204ENST00000590935 APLP2Q06481 763 aa13.52□□□□□ -0.24
DUSP3-204ENST00000590935 VPS8Q8N3P4 1428 aa13.52□□□□□ -0.25
DUSP3-204ENST00000590935 KIAA0586Q9BVV6 1533 aa13.52□□□□□ -0.25
DUSP3-204ENST00000590935 FHOD3Q2V2M9 1422 aa13.52□□□□□ -0.25
DUSP3-204ENST00000590935 JPH4Q96JJ6 628 aa13.51□□□□□ -0.25
DUSP3-204ENST00000590935 IQGAP2Q13576 1575 aa13.5□□□□□ -0.25
DUSP3-204ENST00000590935 CEP170Q5SW79 1584 aa13.5□□□□□ -0.25
DUSP3-204ENST00000590935 NUP160Q12769 1436 aa13.49□□□□□ -0.25
DUSP3-204ENST00000590935 CHD1O14646 1710 aa13.45□□□□□ -0.26
DUSP3-204ENST00000590935 EFCAB5A4FU69 1503 aa13.44□□□□□ -0.26
DUSP3-204ENST00000590935 ZEB1P37275 1124 aaPredicted RBP13.42□□□□□ -0.26
DUSP3-204ENST00000590935 UGGT2Q9NYU1 1516 aa13.41□□□□□ -0.26
DUSP3-204ENST00000590935 OSCARQ8IYS5 282 aa13.41□□□□□ -0.26
DUSP3-204ENST00000590935 ARID3CA6NKF2 412 aa13.4□□□□□ -0.26
DUSP3-204ENST00000590935 FMN1Q68DA7 1419 aa13.4□□□□□ -0.26
DUSP3-204ENST00000590935 SAMD9Q5K651 1589 aa13.4□□□□□ -0.26
DUSP3-204ENST00000590935 DISP1Q96F81 1524 aa13.39□□□□□ -0.27
DUSP3-204ENST00000590935 CARMIL2Q6F5E8 1435 aa13.39□□□□□ -0.27
DUSP3-204ENST00000590935 PRG4Q92954 1404 aaPredicted RBP13.39□□□□□ -0.27
DUSP3-204ENST00000590935 KANK4Q5T7N3 995 aaPredicted RBP13.38□□□□□ -0.27
DUSP3-204ENST00000590935 KIAA0556O60303 1618 aa13.35□□□□□ -0.27
DUSP3-204ENST00000590935 CASKIN1Q8WXD9 1431 aa13.34□□□□□ -0.27
DUSP3-204ENST00000590935 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.33□□□□□ -0.28
DUSP3-204ENST00000590935 HNRNPUL2Q1KMD3 747 aaKnown RBP13.33□□□□□ -0.28
DUSP3-204ENST00000590935 PCF11O94913 1555 aaKnown RBP13.33□□□□□ -0.28
DUSP3-204ENST00000590935 PTPRGP23470 1445 aa13.3□□□□□ -0.28
DUSP3-204ENST00000590935 FYCO1Q9BQS8 1478 aa13.3□□□□□ -0.28
DUSP3-204ENST00000590935 CLASP1Q7Z460 1538 aa13.29□□□□□ -0.28
DUSP3-204ENST00000590935 PLB1Q6P1J6 1458 aa13.28□□□□□ -0.28
DUSP3-204ENST00000590935 ERCC6L2Q5T890 1561 aa13.28□□□□□ -0.28
DUSP3-204ENST00000590935 TIAM1Q13009 1591 aa13.25□□□□□ -0.29
DUSP3-204ENST00000590935 MTUS2Q5JR59 1369 aa13.25□□□□□ -0.29
DUSP3-204ENST00000590935 SHROOM2Q13796 1616 aa13.25□□□□□ -0.29
DUSP3-204ENST00000590935 LRRC9Q6ZRR7 1453 aa13.23□□□□□ -0.29
DUSP3-204ENST00000590935 SCAF1Q9H7N4 1312 aaKnown RBP13.22□□□□□ -0.29
DUSP3-204ENST00000590935 EPRSP07814 1512 aaKnown RBP13.22□□□□□ -0.29
DUSP3-204ENST00000590935 MAP3K1Q13233 1512 aa13.22□□□□□ -0.29
DUSP3-204ENST00000590935 CDK13Q14004 1512 aaKnown RBP13.22□□□□□ -0.29
DUSP3-204ENST00000590935 NUP153P49790 1475 aaKnown RBP13.21□□□□□ -0.29
DUSP3-204ENST00000590935 HECW1Q76N89 1606 aa13.21□□□□□ -0.29
DUSP3-204ENST00000590935 CDK11AQ9UQ88 783 aaPredicted RBP13.21□□□□□ -0.3
DUSP3-204ENST00000590935 RAPGEF6Q8TEU7 1601 aa13.21□□□□□ -0.3
DUSP3-204ENST00000590935 CCDC18Q5T9S5 1454 aa13.19□□□□□ -0.3
DUSP3-204ENST00000590935 UACAQ9BZF9 1416 aa13.19□□□□□ -0.3
DUSP3-204ENST00000590935 PLEKHD1A6NEE1 506 aa13.17□□□□□ -0.3
DUSP3-204ENST00000590935 LRRIQ1Q96JM4 1722 aa13.17□□□□□ -0.3
DUSP3-204ENST00000590935 ABCA8O94911 1581 aa13.16□□□□□ -0.3
DUSP3-204ENST00000590935 CFAP43Q8NDM7 1665 aa13.16□□□□□ -0.3
DUSP3-204ENST00000590935 PHLDB1Q86UU1 1377 aa13.15□□□□□ -0.3
DUSP3-204ENST00000590935 ATP10BO94823 1461 aa13.15□□□□□ -0.3
DUSP3-204ENST00000590935 CCER1Q8TC90 406 aaPredicted RBP13.15□□□□□ -0.31
DUSP3-204ENST00000590935 ITGAEP38570 1179 aa13.14□□□□□ -0.31
DUSP3-204ENST00000590935 MAGI3Q5TCQ9 1506 aa13.14□□□□□ -0.31
DUSP3-204ENST00000590935 FAM50AQ14320 339 aaKnown RBP13.14□□□□□ -0.31
DUSP3-204ENST00000590935 CYB5RLQ6IPT4 315 aa13.12□□□□□ -0.31
DUSP3-204ENST00000590935 NCOA2Q15596 1464 aa13.11□□□□□ -0.31
DUSP3-204ENST00000590935 KCNH8Q96L42 1107 aa13.11□□□□□ -0.31
DUSP3-204ENST00000590935 EHBP1L1Q8N3D4 1523 aa13.1□□□□□ -0.31
DUSP3-204ENST00000590935 CCNB3Q8WWL7 1395 aa13.1□□□□□ -0.31
DUSP3-204ENST00000590935 ABCC2Q92887 1545 aa13.1□□□□□ -0.31
DUSP3-204ENST00000590935 TROQ12816 1431 aaPredicted RBP13.08□□□□□ -0.31
DUSP3-204ENST00000590935 NPM1P06748 294 aaKnown RBP eCLIP13.08□□□□□ -0.32
DUSP3-204ENST00000590935 ARHGEF11O15085 1522 aa13.08□□□□□ -0.32
DUSP3-204ENST00000590935 RRBP1Q9P2E9 1410 aaKnown RBP13.07□□□□□ -0.32
DUSP3-204ENST00000590935 SUPT6HQ7KZ85 1726 aaKnown RBP13.06□□□□□ -0.32
DUSP3-204ENST00000590935 UHRF1BP1LA0JNW5 1464 aa13.05□□□□□ -0.32
DUSP3-204ENST00000590935 ZNF777Q9ULD5 760 aaPredicted RBP13.04□□□□□ -0.32
DUSP3-204ENST00000590935 MYOM3Q5VTT5 1437 aa13.04□□□□□ -0.32
DUSP3-204ENST00000590935 FGD6Q6ZV73 1430 aa13.03□□□□□ -0.32
DUSP3-204ENST00000590935 CFDP1Q9UEE9 299 aaPredicted RBP13.03□□□□□ -0.32
DUSP3-204ENST00000590935 KDM5BQ9UGL1 1544 aa13.02□□□□□ -0.32
DUSP3-204ENST00000590935 ADCY10Q96PN6 1610 aa13.02□□□□□ -0.33
DUSP3-204ENST00000590935 ZNF644Q9H582 1327 aaPredicted RBP13.01□□□□□ -0.33
DUSP3-204ENST00000590935 NEUROD1Q13562 356 aa13□□□□□ -0.33
DUSP3-204ENST00000590935 KIF14Q15058 1648 aa13□□□□□ -0.33
DUSP3-204ENST00000590935 PELP1Q8IZL8 1130 aaKnown RBP12.99□□□□□ -0.33
DUSP3-204ENST00000590935 RIMBP3CA6NJZ7 1639 aa12.99□□□□□ -0.33
DUSP3-204ENST00000590935 RIMBP3BA6NNM3 1639 aa12.99□□□□□ -0.33
DUSP3-204ENST00000590935 RIMBP3Q9UFD9 1639 aa12.99□□□□□ -0.33
DUSP3-204ENST00000590935 ZCCHC11Q5TAX3 1644 aaKnown RBP12.99□□□□□ -0.33
DUSP3-204ENST00000590935 ACIN1Q9UKV3 1341 aaKnown RBP12.99□□□□□ -0.33
DUSP3-204ENST00000590935 DIEXFQ68CQ4 756 aaKnown RBP12.98□□□□□ -0.33
DUSP3-204ENST00000590935 GPATCH8Q9UKJ3 1502 aaKnown RBP12.97□□□□□ -0.33
DUSP3-204ENST00000590935 CHIC2Q9UKJ5 165 aa12.97□□□□□ -0.33
DUSP3-204ENST00000590935 ASXL2Q76L83 1435 aa12.96□□□□□ -0.34
DUSP3-204ENST00000590935 MIA2Q96PC5 1412 aa12.95□□□□□ -0.34
DUSP3-204ENST00000590935 ABCC10Q5T3U5 1492 aa12.94□□□□□ -0.34
DUSP3-204ENST00000590935 PTPN23Q9H3S7 1636 aa12.93□□□□□ -0.34
DUSP3-204ENST00000590935 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms