RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 IGF1RP08069 1367 aa31.19■■■□□ 2.58
VAT1-208ENST00000590924 JPH4Q96JJ6 628 aa31.19■■■□□ 2.58
VAT1-208ENST00000590924 KIAA0586Q9BVV6 1533 aa31.11■■■□□ 2.57
VAT1-208ENST00000590924 KIF13AQ9H1H9 1805 aa31.08■■■□□ 2.57
VAT1-208ENST00000590924 CARMIL1Q5VZK9 1371 aa31■■■□□ 2.55
VAT1-208ENST00000590924 ADCY10Q96PN6 1610 aa30.97■■■□□ 2.55
VAT1-208ENST00000590924 MAPKBP1O60336 1514 aa30.9■■■□□ 2.54
VAT1-208ENST00000590924 IQGAP2Q13576 1575 aa30.88■■■□□ 2.53
VAT1-208ENST00000590924 ABCC10Q5T3U5 1492 aa30.82■■■□□ 2.52
VAT1-208ENST00000590924 NPM1P06748 294 aaKnown RBP eCLIP30.81■■■□□ 2.52
VAT1-208ENST00000590924 DIP2BQ9P265 1576 aa30.8■■■□□ 2.52
VAT1-208ENST00000590924 CARMIL2Q6F5E8 1435 aa30.78■■■□□ 2.52
VAT1-208ENST00000590924 RAPGEF2Q9Y4G8 1499 aa30.76■■■□□ 2.52
VAT1-208ENST00000590924 PTPRGP23470 1445 aa30.75■■■□□ 2.51
VAT1-208ENST00000590924 TNIKQ9UKE5 1360 aa30.72■■■□□ 2.51
VAT1-208ENST00000590924 DISP1Q96F81 1524 aa30.68■■■□□ 2.5
VAT1-208ENST00000590924 FAM69CQ0P6D2 419 aa30.68■■■□□ 2.5
VAT1-208ENST00000590924 CTTNBP2Q8WZ74 1663 aa30.68■■■□□ 2.5
VAT1-208ENST00000590924 UGGT2Q9NYU1 1516 aa30.68■■■□□ 2.5
VAT1-208ENST00000590924 TSPOAP1O95153 1857 aa30.63■■■□□ 2.49
VAT1-208ENST00000590924 ABCC2Q92887 1545 aa30.63■■■□□ 2.49
VAT1-208ENST00000590924 UHRF1BP1LA0JNW5 1464 aa30.61■■■□□ 2.49
VAT1-208ENST00000590924 KIAA0556O60303 1618 aa30.61■■■□□ 2.49
VAT1-208ENST00000590924 TTBK1Q5TCY1 1321 aaPredicted RBP30.57■■■□□ 2.48
VAT1-208ENST00000590924 UACAQ9BZF9 1416 aa30.55■■■□□ 2.48
VAT1-208ENST00000590924 AEBP2Q6ZN18 517 aaPredicted RBP30.5■■■□□ 2.47
VAT1-208ENST00000590924 KDM6BO15054 1643 aa30.5■■■□□ 2.47
VAT1-208ENST00000590924 PLB1Q6P1J6 1458 aa30.5■■■□□ 2.47
VAT1-208ENST00000590924 ASXL2Q76L83 1435 aa30.48■■■□□ 2.47
VAT1-208ENST00000590924 PRXQ9BXM0 1461 aa30.48■■■□□ 2.47
VAT1-208ENST00000590924 GLI2P10070 1586 aa30.48■■■□□ 2.47
VAT1-208ENST00000590924 KDM5BQ9UGL1 1544 aa30.47■■■□□ 2.47
VAT1-208ENST00000590924 ZCCHC11Q5TAX3 1644 aaKnown RBP30.46■■■□□ 2.47
VAT1-208ENST00000590924 PPRC1Q5VV67 1664 aaKnown RBP30.43■■■□□ 2.46
VAT1-208ENST00000590924 GOLGA3Q08378 1498 aa30.41■■■□□ 2.46
VAT1-208ENST00000590924 MAP3K4Q9Y6R4 1608 aa30.35■■■□□ 2.45
VAT1-208ENST00000590924 EPRSP07814 1512 aaKnown RBP30.32■■■□□ 2.44
VAT1-208ENST00000590924 ABCA8O94911 1581 aa30.31■■■□□ 2.44
VAT1-208ENST00000590924 WDR7Q9Y4E6 1490 aa30.24■■■□□ 2.43
VAT1-208ENST00000590924 TEX14Q8IWB6 1497 aa30.19■■■□□ 2.42
VAT1-208ENST00000590924 CSRNP3Q8WYN3 585 aa30.18■■■□□ 2.42
VAT1-208ENST00000590924 EEA1Q15075 1411 aa30.18■■■□□ 2.42
VAT1-208ENST00000590924 CFAP43Q8NDM7 1665 aa30.17■■■□□ 2.42
VAT1-208ENST00000590924 SAMD9Q5K651 1589 aa30.16■■■□□ 2.42
VAT1-208ENST00000590924 COL17A1Q9UMD9 1497 aaPredicted RBP30.08■■■□□ 2.41
VAT1-208ENST00000590924 MAGI3Q5TCQ9 1506 aa30.03■■■□□ 2.4
VAT1-208ENST00000590924 KDM4FA0A1W2PPD8 638 aa30.02■■■□□ 2.4
VAT1-208ENST00000590924 FAM9AQ8IZU1 332 aaPredicted RBP30.02■■■□□ 2.4
VAT1-208ENST00000590924 RAPGEF6Q8TEU7 1601 aa30.02■■■□□ 2.4
VAT1-208ENST00000590924 CD109Q6YHK3 1445 aa30■■■□□ 2.39
VAT1-208ENST00000590924 P3H3Q8IVL6 736 aa30■■■□□ 2.39
VAT1-208ENST00000590924 KIF21BO75037 1637 aa30■■■□□ 2.39
VAT1-208ENST00000590924 ATP10BO94823 1461 aa29.99■■■□□ 2.39
VAT1-208ENST00000590924 CHIC1Q5VXU3 224 aa29.95■■■□□ 2.39
VAT1-208ENST00000590924 KCNH8Q96L42 1107 aa29.95■■■□□ 2.39
VAT1-208ENST00000590924 ABCA9Q8IUA7 1624 aa29.92■■■□□ 2.38
VAT1-208ENST00000590924 ADGRL1O94910 1474 aa29.88■■■□□ 2.37
VAT1-208ENST00000590924 EFCAB5A4FU69 1503 aa29.87■■■□□ 2.37
VAT1-208ENST00000590924 ARID3CA6NKF2 412 aa29.87■■■□□ 2.37
VAT1-208ENST00000590924 FHOD3Q2V2M9 1422 aa29.85■■■□□ 2.37
VAT1-208ENST00000590924 NUP153P49790 1475 aaKnown RBP29.85■■■□□ 2.37
VAT1-208ENST00000590924 ARAP3Q8WWN8 1544 aa29.8■■■□□ 2.36
VAT1-208ENST00000590924 RANGAP1P46060 587 aaPredicted RBP29.77■■■□□ 2.36
VAT1-208ENST00000590924 PHLDB1Q86UU1 1377 aa29.72■■■□□ 2.35
VAT1-208ENST00000590924 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.7■■■□□ 2.35
VAT1-208ENST00000590924 HNRNPUL2Q1KMD3 747 aaKnown RBP29.7■■■□□ 2.35
VAT1-208ENST00000590924 NEO1Q92859 1461 aa29.69■■■□□ 2.34
VAT1-208ENST00000590924 FRMPD1Q5SYB0 1578 aa29.6■■■□□ 2.33
VAT1-208ENST00000590924 PLEKHD1A6NEE1 506 aa29.6■■■□□ 2.33
VAT1-208ENST00000590924 CFAP74Q9C0B2 1584 aa29.6■■■□□ 2.33
VAT1-208ENST00000590924 UBTFP17480 764 aaKnown RBP29.58■■■□□ 2.33
VAT1-208ENST00000590924 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.58■■■□□ 2.331e-6■■■□□ 17.1
VAT1-208ENST00000590924 HECW1Q76N89 1606 aa29.56■■■□□ 2.32
VAT1-208ENST00000590924 TTC37Q6PGP7 1564 aa29.56■■■□□ 2.32
VAT1-208ENST00000590924 CDK13Q14004 1512 aaKnown RBP29.56■■■□□ 2.32
VAT1-208ENST00000590924 RICTORQ6R327 1708 aa29.56■■■□□ 2.32
VAT1-208ENST00000590924 ARHGAP35Q9NRY4 1499 aa29.55■■■□□ 2.32
VAT1-208ENST00000590924 FMN1Q68DA7 1419 aa29.54■■■□□ 2.32
VAT1-208ENST00000590924 EHMT2Q96KQ7 1210 aa29.51■■■□□ 2.31
VAT1-208ENST00000590924 RAPGEF3O95398 923 aa29.5■■■□□ 2.31
VAT1-208ENST00000590924 FANCAO15360 1455 aa29.49■■■□□ 2.31
VAT1-208ENST00000590924 HECW2Q9P2P5 1572 aa29.47■■■□□ 2.31
VAT1-208ENST00000590924 ADAMTSL3P82987 1691 aa29.47■■■□□ 2.31
VAT1-208ENST00000590924 AKNAQ7Z591 1439 aa29.45■■■□□ 2.31
VAT1-208ENST00000590924 LRRIQ1Q96JM4 1722 aa29.45■■■□□ 2.3
VAT1-208ENST00000590924 ARHGEF40Q8TER5 1519 aa29.45■■■□□ 2.3
VAT1-208ENST00000590924 DENND4BO75064 1496 aaPredicted RBP29.44■■■□□ 2.3
VAT1-208ENST00000590924 MYO5CQ9NQX4 1742 aa29.44■■■□□ 2.3
VAT1-208ENST00000590924 BCORL1Q5H9F3 1711 aa29.43■■■□□ 2.3
VAT1-208ENST00000590924 ZMYM4Q5VZL5 1548 aa29.4■■■□□ 2.3
VAT1-208ENST00000590924 KIF14Q15058 1648 aa29.36■■■□□ 2.29
VAT1-208ENST00000590924 PLCH2O75038 1416 aa29.36■■■□□ 2.29
VAT1-208ENST00000590924 ATP1B4Q9UN42 357 aaPredicted RBP29.34■■■□□ 2.29
VAT1-208ENST00000590924 MADDQ8WXG6 1647 aa29.32■■■□□ 2.28
VAT1-208ENST00000590924 CDK11AQ9UQ88 783 aaPredicted RBP29.31■■■□□ 2.28
VAT1-208ENST00000590924 PTPRMP28827 1452 aa29.3■■■□□ 2.28
VAT1-208ENST00000590924 PCF11O94913 1555 aaKnown RBP29.3■■■□□ 2.28
VAT1-208ENST00000590924 TROQ12816 1431 aaPredicted RBP29.29■■■□□ 2.28
VAT1-208ENST00000590924 ZFYVE16Q7Z3T8 1539 aa29.29■■■□□ 2.28
VAT1-208ENST00000590924 MAGI2Q86UL8 1455 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms