RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 CTTNBP2Q8WZ74 1663 aa27.87■■■□□ 2.05
RPRD1A-209ENST00000590898 JPH4Q96JJ6 628 aa27.83■■■□□ 2.05
RPRD1A-209ENST00000590898 UBTFP17480 764 aaKnown RBP27.82■■■□□ 2.04
RPRD1A-209ENST00000590898 IQGAP2Q13576 1575 aa27.82■■■□□ 2.04
RPRD1A-209ENST00000590898 DNAJC5Q9H3Z4 198 aa27.82■■■□□ 2.04
RPRD1A-209ENST00000590898 SHROOM2Q13796 1616 aa27.8■■■□□ 2.04
RPRD1A-209ENST00000590898 EHMT2Q96KQ7 1210 aa27.77■■■□□ 2.04
RPRD1A-209ENST00000590898 UGGT2Q9NYU1 1516 aa27.71■■■□□ 2.03
RPRD1A-209ENST00000590898 TNIKQ9UKE5 1360 aa27.69■■■□□ 2.02
RPRD1A-209ENST00000590898 PRG4Q92954 1404 aaPredicted RBP27.68■■■□□ 2.02
RPRD1A-209ENST00000590898 LOC105371045A0A1W2PR82 267 aa27.68■■■□□ 2.02
RPRD1A-209ENST00000590898 ARHGEF11O15085 1522 aa27.65■■■□□ 2.02
RPRD1A-209ENST00000590898 CARMIL2Q6F5E8 1435 aa27.63■■■□□ 2.01
RPRD1A-209ENST00000590898 RIMBP3CA6NJZ7 1639 aa27.6■■■□□ 2.01
RPRD1A-209ENST00000590898 RIMBP3BA6NNM3 1639 aa27.6■■■□□ 2.01
RPRD1A-209ENST00000590898 RIMBP3Q9UFD9 1639 aa27.6■■■□□ 2.01
RPRD1A-209ENST00000590898 DISP1Q96F81 1524 aa27.59■■■□□ 2.01
RPRD1A-209ENST00000590898 ERCC6L2Q5T890 1561 aa27.58■■■□□ 2.01
RPRD1A-209ENST00000590898 SAMD9Q5K651 1589 aa27.53■■■□□ 2
RPRD1A-209ENST00000590898 KIAA0556O60303 1618 aa27.53■■■□□ 2
RPRD1A-209ENST00000590898 EFCAB5A4FU69 1503 aa27.52■■■□□ 2
RPRD1A-209ENST00000590898 RANGAP1P46060 587 aaPredicted RBP27.51■■□□□ 1.99
RPRD1A-209ENST00000590898 ARAP1Q96P48 1450 aa27.45■■□□□ 1.99
RPRD1A-209ENST00000590898 PTPRGP23470 1445 aa27.44■■□□□ 1.98
RPRD1A-209ENST00000590898 ARHGAP35Q9NRY4 1499 aa27.43■■□□□ 1.98
RPRD1A-209ENST00000590898 CLIP1P30622 1438 aa27.43■■□□□ 1.98
RPRD1A-209ENST00000590898 P3H3Q8IVL6 736 aa27.42■■□□□ 1.98
RPRD1A-209ENST00000590898 CEP162Q5TB80 1403 aa27.41■■□□□ 1.98
RPRD1A-209ENST00000590898 CYB5RLQ6IPT4 315 aa27.39■■□□□ 1.98
RPRD1A-209ENST00000590898 FHOD3Q2V2M9 1422 aa27.35■■□□□ 1.97
RPRD1A-209ENST00000590898 TTBK1Q5TCY1 1321 aaPredicted RBP27.31■■□□□ 1.96
RPRD1A-209ENST00000590898 FMN1Q68DA7 1419 aa27.28■■□□□ 1.96
RPRD1A-209ENST00000590898 UACAQ9BZF9 1416 aa27.27■■□□□ 1.96
RPRD1A-209ENST00000590898 UHRF1BP1LA0JNW5 1464 aa27.23■■□□□ 1.95
RPRD1A-209ENST00000590898 ABCA8O94911 1581 aa27.23■■□□□ 1.95
RPRD1A-209ENST00000590898 PLB1Q6P1J6 1458 aa27.21■■□□□ 1.95
RPRD1A-209ENST00000590898 ABCC2Q92887 1545 aa27.19■■□□□ 1.94
RPRD1A-209ENST00000590898 ADCY10Q96PN6 1610 aa27.18■■□□□ 1.94
RPRD1A-209ENST00000590898 RAPGEF6Q8TEU7 1601 aa27.17■■□□□ 1.94
RPRD1A-209ENST00000590898 NPM1P06748 294 aaKnown RBP eCLIP27.11■■□□□ 1.93
RPRD1A-209ENST00000590898 CASKIN1Q8WXD9 1431 aa27.1■■□□□ 1.93
RPRD1A-209ENST00000590898 KDM5BQ9UGL1 1544 aa27.09■■□□□ 1.93
RPRD1A-209ENST00000590898 VPS8Q8N3P4 1428 aa27.07■■□□□ 1.92
RPRD1A-209ENST00000590898 NUP153P49790 1475 aaKnown RBP27.06■■□□□ 1.92
RPRD1A-209ENST00000590898 FYCO1Q9BQS8 1478 aa27.05■■□□□ 1.92
RPRD1A-209ENST00000590898 HECW1Q76N89 1606 aa27.04■■□□□ 1.92
RPRD1A-209ENST00000590898 PCF11O94913 1555 aaKnown RBP27.03■■□□□ 1.92
RPRD1A-209ENST00000590898 ATP10BO94823 1461 aa27.02■■□□□ 1.92
RPRD1A-209ENST00000590898 ATP1B4Q9UN42 357 aaPredicted RBP27.01■■□□□ 1.91
RPRD1A-209ENST00000590898 ZCCHC11Q5TAX3 1644 aaKnown RBP27■■□□□ 1.91
RPRD1A-209ENST00000590898 EPRSP07814 1512 aaKnown RBP26.97■■□□□ 1.91
RPRD1A-209ENST00000590898 MAPKBP1O60336 1514 aa26.96■■□□□ 1.91
RPRD1A-209ENST00000590898 CCDC18Q5T9S5 1454 aa26.94■■□□□ 1.9
RPRD1A-209ENST00000590898 LRRIQ1Q96JM4 1722 aa26.94■■□□□ 1.9
RPRD1A-209ENST00000590898 ARID3CA6NKF2 412 aa26.93■■□□□ 1.9
RPRD1A-209ENST00000590898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.92■■□□□ 1.9
RPRD1A-209ENST00000590898 HNRNPUL2Q1KMD3 747 aaKnown RBP26.92■■□□□ 1.9
RPRD1A-209ENST00000590898 CDK11AQ9UQ88 783 aaPredicted RBP26.89■■□□□ 1.9
RPRD1A-209ENST00000590898 CDK13Q14004 1512 aaKnown RBP26.89■■□□□ 1.9
RPRD1A-209ENST00000590898 ASXL2Q76L83 1435 aa26.88■■□□□ 1.89
RPRD1A-209ENST00000590898 PLEKHD1A6NEE1 506 aa26.86■■□□□ 1.89
RPRD1A-209ENST00000590898 MAP3K1Q13233 1512 aa26.83■■□□□ 1.89
RPRD1A-209ENST00000590898 WDR7Q9Y4E6 1490 aa26.83■■□□□ 1.89
RPRD1A-209ENST00000590898 APLP2Q06481 763 aa26.8■■□□□ 1.88
RPRD1A-209ENST00000590898 CFAP43Q8NDM7 1665 aa26.77■■□□□ 1.88
RPRD1A-209ENST00000590898 TIAM1Q13009 1591 aa26.77■■□□□ 1.88
RPRD1A-209ENST00000590898 ABCC10Q5T3U5 1492 aa26.77■■□□□ 1.88
RPRD1A-209ENST00000590898 TROQ12816 1431 aaPredicted RBP26.74■■□□□ 1.87
RPRD1A-209ENST00000590898 KCNH8Q96L42 1107 aa26.73■■□□□ 1.87
RPRD1A-209ENST00000590898 DIP2BQ9P265 1576 aa26.71■■□□□ 1.87
RPRD1A-209ENST00000590898 GLI2P10070 1586 aa26.7■■□□□ 1.87
RPRD1A-209ENST00000590898 MTUS2Q5JR59 1369 aa26.7■■□□□ 1.86
RPRD1A-209ENST00000590898 MAGI3Q5TCQ9 1506 aa26.7■■□□□ 1.86
RPRD1A-209ENST00000590898 KIF13AQ9H1H9 1805 aa26.69■■□□□ 1.86
RPRD1A-209ENST00000590898 FAM69CQ0P6D2 419 aa26.69■■□□□ 1.86
RPRD1A-209ENST00000590898 LRRC9Q6ZRR7 1453 aa26.66■■□□□ 1.86
RPRD1A-209ENST00000590898 TRHP20396 242 aaPredicted RBP26.65■■□□□ 1.86
RPRD1A-209ENST00000590898 EHBP1L1Q8N3D4 1523 aa26.65■■□□□ 1.86
RPRD1A-209ENST00000590898 KANK4Q5T7N3 995 aaPredicted RBP26.63■■□□□ 1.85
RPRD1A-209ENST00000590898 KIF14Q15058 1648 aa26.62■■□□□ 1.85
RPRD1A-209ENST00000590898 ABCA9Q8IUA7 1624 aa26.62■■□□□ 1.85
RPRD1A-209ENST00000590898 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.59■■□□□ 1.852e-9■■■□□ 19.1
RPRD1A-209ENST00000590898 MAP3K4Q9Y6R4 1608 aa26.57■■□□□ 1.84
RPRD1A-209ENST00000590898 SUPT6HQ7KZ85 1726 aaKnown RBP26.56■■□□□ 1.84
RPRD1A-209ENST00000590898 CD109Q6YHK3 1445 aa26.55■■□□□ 1.84
RPRD1A-209ENST00000590898 TTC37Q6PGP7 1564 aa26.52■■□□□ 1.84
RPRD1A-209ENST00000590898 NCOA2Q15596 1464 aa26.5■■□□□ 1.83
RPRD1A-209ENST00000590898 TSPOAP1O95153 1857 aa26.49■■□□□ 1.83
RPRD1A-209ENST00000590898 MYO5CQ9NQX4 1742 aa26.48■■□□□ 1.83
RPRD1A-209ENST00000590898 PLCH2O75038 1416 aa26.47■■□□□ 1.83
RPRD1A-209ENST00000590898 ARAP3Q8WWN8 1544 aa26.46■■□□□ 1.83
RPRD1A-209ENST00000590898 CCNB3Q8WWL7 1395 aa26.45■■□□□ 1.83
RPRD1A-209ENST00000590898 CDC42BPAQ5VT25 1732 aa26.45■■□□□ 1.82
RPRD1A-209ENST00000590898 PPRC1Q5VV67 1664 aaKnown RBP26.44■■□□□ 1.82
RPRD1A-209ENST00000590898 GPATCH8Q9UKJ3 1502 aaKnown RBP26.44■■□□□ 1.82
RPRD1A-209ENST00000590898 TEX14Q8IWB6 1497 aa26.43■■□□□ 1.82
RPRD1A-209ENST00000590898 CDC42BPBQ9Y5S2 1711 aa26.42■■□□□ 1.82
RPRD1A-209ENST00000590898 PREX2Q70Z35 1606 aa26.41■■□□□ 1.82
RPRD1A-209ENST00000590898 EFCAB2Q5VUJ9 269 aa26.39■■□□□ 1.82
RPRD1A-209ENST00000590898 ITSN2Q9NZM3 1697 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms