RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 SYNJ2O15056 1496 aa20.4■□□□□ 0.86
PTBP1-216ENST00000590887 RANGAP1P46060 587 aaPredicted RBP20.36■□□□□ 0.85
PTBP1-216ENST00000590887 GRIN2AQ12879 1464 aa20.35■□□□□ 0.85
PTBP1-216ENST00000590887 EFCAB5A4FU69 1503 aa20.34■□□□□ 0.85
PTBP1-216ENST00000590887 FBLN2P98095 1184 aa20.31■□□□□ 0.84
PTBP1-216ENST00000590887 APLP2Q06481 763 aa20.31■□□□□ 0.84
PTBP1-216ENST00000590887 VPS8Q8N3P4 1428 aa20.3■□□□□ 0.84
PTBP1-216ENST00000590887 CHD1O14646 1710 aa20.3■□□□□ 0.84
PTBP1-216ENST00000590887 IQGAP2Q13576 1575 aa20.28■□□□□ 0.84
PTBP1-216ENST00000590887 KIAA0586Q9BVV6 1533 aa20.27■□□□□ 0.84
PTBP1-216ENST00000590887 ARHGAP35Q9NRY4 1499 aa20.26■□□□□ 0.83
PTBP1-216ENST00000590887 ARAP1Q96P48 1450 aa20.22■□□□□ 0.83
PTBP1-216ENST00000590887 NUP160Q12769 1436 aa20.2■□□□□ 0.82
PTBP1-216ENST00000590887 FMN1Q68DA7 1419 aa20.18■□□□□ 0.82
PTBP1-216ENST00000590887 UGGT2Q9NYU1 1516 aa20.17■□□□□ 0.82
PTBP1-216ENST00000590887 SAMD9Q5K651 1589 aa20.17■□□□□ 0.82
PTBP1-216ENST00000590887 CEP170Q5SW79 1584 aa20.15■□□□□ 0.82
PTBP1-216ENST00000590887 CARMIL2Q6F5E8 1435 aa20.13■□□□□ 0.81
PTBP1-216ENST00000590887 P3H3Q8IVL6 736 aa20.12■□□□□ 0.81
PTBP1-216ENST00000590887 RIMBP3CA6NJZ7 1639 aa20.12■□□□□ 0.81
PTBP1-216ENST00000590887 RIMBP3BA6NNM3 1639 aa20.12■□□□□ 0.81
PTBP1-216ENST00000590887 RIMBP3Q9UFD9 1639 aa20.12■□□□□ 0.81
PTBP1-216ENST00000590887 CLASP1Q7Z460 1538 aa20.11■□□□□ 0.81
PTBP1-216ENST00000590887 JPH4Q96JJ6 628 aa20.1■□□□□ 0.81
PTBP1-216ENST00000590887 FHOD3Q2V2M9 1422 aa20.1■□□□□ 0.81
PTBP1-216ENST00000590887 ARHGEF11O15085 1522 aa20.09■□□□□ 0.81
PTBP1-216ENST00000590887 TRIM26Q12899 539 aaPredicted RBP20.09■□□□□ 0.81
PTBP1-216ENST00000590887 MAP3K1Q13233 1512 aa20.05■□□□□ 0.8
PTBP1-216ENST00000590887 FYCO1Q9BQS8 1478 aa20.05■□□□□ 0.8
PTBP1-216ENST00000590887 CASKIN1Q8WXD9 1431 aa20.04■□□□□ 0.8
PTBP1-216ENST00000590887 KIAA0556O60303 1618 aa20.04■□□□□ 0.8
PTBP1-216ENST00000590887 ATP1B4Q9UN42 357 aaPredicted RBP20■□□□□ 0.79
PTBP1-216ENST00000590887 DISP1Q96F81 1524 aa20■□□□□ 0.79
PTBP1-216ENST00000590887 PCF11O94913 1555 aaKnown RBP19.96■□□□□ 0.79
PTBP1-216ENST00000590887 SHROOM2Q13796 1616 aa19.94■□□□□ 0.78
PTBP1-216ENST00000590887 PPARGC1BQ86YN6 1023 aaKnown RBP19.94■□□□□ 0.78
PTBP1-216ENST00000590887 HECW1Q76N89 1606 aa19.94■□□□□ 0.78
PTBP1-216ENST00000590887 PRG4Q92954 1404 aaPredicted RBP19.93■□□□□ 0.78
PTBP1-216ENST00000590887 CCDC18Q5T9S5 1454 aa19.93■□□□□ 0.78
PTBP1-216ENST00000590887 TIAM1Q13009 1591 aa19.93■□□□□ 0.78
PTBP1-216ENST00000590887 PCGF6Q9BYE7 350 aa19.91■□□□□ 0.78
PTBP1-216ENST00000590887 CYB5RLQ6IPT4 315 aa19.9■□□□□ 0.78
PTBP1-216ENST00000590887 CFAP43Q8NDM7 1665 aa19.9■□□□□ 0.78
PTBP1-216ENST00000590887 RAPGEF6Q8TEU7 1601 aa19.87■□□□□ 0.77
PTBP1-216ENST00000590887 CDK11AQ9UQ88 783 aaPredicted RBP19.86■□□□□ 0.77
PTBP1-216ENST00000590887 PTPRGP23470 1445 aa19.85■□□□□ 0.77
PTBP1-216ENST00000590887 LRRC9Q6ZRR7 1453 aa19.85■□□□□ 0.77
PTBP1-216ENST00000590887 TTBK1Q5TCY1 1321 aaPredicted RBP19.83■□□□□ 0.77
PTBP1-216ENST00000590887 ERCC6L2Q5T890 1561 aa19.82■□□□□ 0.76
PTBP1-216ENST00000590887 MTUS2Q5JR59 1369 aa19.82■□□□□ 0.76
PTBP1-216ENST00000590887 KANK4Q5T7N3 995 aaPredicted RBP19.81■□□□□ 0.76
PTBP1-216ENST00000590887 EPRSP07814 1512 aaKnown RBP19.8■□□□□ 0.76
PTBP1-216ENST00000590887 EHBP1L1Q8N3D4 1523 aa19.76■□□□□ 0.75
PTBP1-216ENST00000590887 ABCA8O94911 1581 aa19.76■□□□□ 0.75
PTBP1-216ENST00000590887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.76■□□□□ 0.75
PTBP1-216ENST00000590887 HNRNPUL2Q1KMD3 747 aaKnown RBP19.76■□□□□ 0.75
PTBP1-216ENST00000590887 UACAQ9BZF9 1416 aa19.74■□□□□ 0.75
PTBP1-216ENST00000590887 LRRIQ1Q96JM4 1722 aa19.73■□□□□ 0.75
PTBP1-216ENST00000590887 NUP153P49790 1475 aaKnown RBP19.73■□□□□ 0.75
PTBP1-216ENST00000590887 PLB1Q6P1J6 1458 aa19.73■□□□□ 0.75
PTBP1-216ENST00000590887 SUPT6HQ7KZ85 1726 aaKnown RBP19.72■□□□□ 0.75
PTBP1-216ENST00000590887 PLEKHD1A6NEE1 506 aa19.69■□□□□ 0.74
PTBP1-216ENST00000590887 RRBP1Q9P2E9 1410 aaKnown RBP19.66■□□□□ 0.74
PTBP1-216ENST00000590887 UHRF1BP1LA0JNW5 1464 aa19.66■□□□□ 0.74
PTBP1-216ENST00000590887 CDK13Q14004 1512 aaKnown RBP19.66■□□□□ 0.74
PTBP1-216ENST00000590887 ABCC2Q92887 1545 aa19.65■□□□□ 0.74
PTBP1-216ENST00000590887 CCNB3Q8WWL7 1395 aa19.63■□□□□ 0.73
PTBP1-216ENST00000590887 TROQ12816 1431 aaPredicted RBP19.62■□□□□ 0.73
PTBP1-216ENST00000590887 ARID3CA6NKF2 412 aa19.62■□□□□ 0.73
PTBP1-216ENST00000590887 ATP10BO94823 1461 aa19.61■□□□□ 0.73
PTBP1-216ENST00000590887 NCOA2Q15596 1464 aa19.61■□□□□ 0.73
PTBP1-216ENST00000590887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.59■□□□□ 0.734e-7■■■□□ 16.1
PTBP1-216ENST00000590887 PHLDB1Q86UU1 1377 aa19.57■□□□□ 0.72
PTBP1-216ENST00000590887 MYOM3Q5VTT5 1437 aa19.57■□□□□ 0.72
PTBP1-216ENST00000590887 NPM1P06748 294 aaKnown RBP eCLIP19.56■□□□□ 0.72
PTBP1-216ENST00000590887 MAGI3Q5TCQ9 1506 aa19.56■□□□□ 0.72
PTBP1-216ENST00000590887 ADCY10Q96PN6 1610 aa19.55■□□□□ 0.72
PTBP1-216ENST00000590887 MIA2Q96PC5 1412 aa19.54■□□□□ 0.72
PTBP1-216ENST00000590887 TRHP20396 242 aaPredicted RBP19.53■□□□□ 0.72
PTBP1-216ENST00000590887 FGD6Q6ZV73 1430 aa19.52■□□□□ 0.72
PTBP1-216ENST00000590887 KDM5BQ9UGL1 1544 aa19.52■□□□□ 0.72
PTBP1-216ENST00000590887 KIF14Q15058 1648 aa19.52■□□□□ 0.72
PTBP1-216ENST00000590887 FAM50AQ14320 339 aaKnown RBP19.52■□□□□ 0.72
PTBP1-216ENST00000590887 ITSN2Q9NZM3 1697 aa19.5■□□□□ 0.71
PTBP1-216ENST00000590887 ZCCHC11Q5TAX3 1644 aaKnown RBP19.48■□□□□ 0.71
PTBP1-216ENST00000590887 PTPN23Q9H3S7 1636 aa19.45■□□□□ 0.7
PTBP1-216ENST00000590887 CFDP1Q9UEE9 299 aaPredicted RBP19.43■□□□□ 0.7
PTBP1-216ENST00000590887 TCOF1Q13428 1488 aaKnown RBP19.42■□□□□ 0.7
PTBP1-216ENST00000590887 ITGAEP38570 1179 aa19.4■□□□□ 0.7
PTBP1-216ENST00000590887 GPATCH8Q9UKJ3 1502 aaKnown RBP19.39■□□□□ 0.69
PTBP1-216ENST00000590887 ZEB1P37275 1124 aaPredicted RBP19.38■□□□□ 0.69
PTBP1-216ENST00000590887 ABCC10Q5T3U5 1492 aa19.38■□□□□ 0.69
PTBP1-216ENST00000590887 ACIN1Q9UKV3 1341 aaKnown RBP19.36■□□□□ 0.69
PTBP1-216ENST00000590887 KCNH8Q96L42 1107 aa19.36■□□□□ 0.69
PTBP1-216ENST00000590887 MAPKBP1O60336 1514 aa19.35■□□□□ 0.69
PTBP1-216ENST00000590887 WDR7Q9Y4E6 1490 aa19.35■□□□□ 0.69
PTBP1-216ENST00000590887 CDC42BPAQ5VT25 1732 aa19.34■□□□□ 0.69
PTBP1-216ENST00000590887 RSPH4AQ5TD94 716 aa19.34■□□□□ 0.69
PTBP1-216ENST00000590887 KIF13AQ9H1H9 1805 aa19.33■□□□□ 0.69
PTBP1-216ENST00000590887 MYO5CQ9NQX4 1742 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms