RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 GRIN2AQ12879 1464 aa27.03■■□□□ 1.92
GCDH-212ENST00000590530 CTTNBP2Q8WZ74 1663 aa26.92■■□□□ 1.9
GCDH-212ENST00000590530 ARHGAP35Q9NRY4 1499 aa26.9■■□□□ 1.9
GCDH-212ENST00000590530 CEP170Q5SW79 1584 aa26.9■■□□□ 1.9
GCDH-212ENST00000590530 P3H3Q8IVL6 736 aa26.87■■□□□ 1.89
GCDH-212ENST00000590530 ARAP1Q96P48 1450 aa26.85■■□□□ 1.89
GCDH-212ENST00000590530 NUP160Q12769 1436 aa26.84■■□□□ 1.89
GCDH-212ENST00000590530 CHD1O14646 1710 aa26.84■■□□□ 1.89
GCDH-212ENST00000590530 KIAA0586Q9BVV6 1533 aa26.82■■□□□ 1.88
GCDH-212ENST00000590530 IQGAP2Q13576 1575 aa26.81■■□□□ 1.88
GCDH-212ENST00000590530 FHOD3Q2V2M9 1422 aa26.75■■□□□ 1.87
GCDH-212ENST00000590530 VPS8Q8N3P4 1428 aa26.72■■□□□ 1.87
GCDH-212ENST00000590530 SAMD9Q5K651 1589 aa26.69■■□□□ 1.86
GCDH-212ENST00000590530 PPARGC1BQ86YN6 1023 aaKnown RBP26.69■■□□□ 1.86
GCDH-212ENST00000590530 JPH4Q96JJ6 628 aa26.68■■□□□ 1.86
GCDH-212ENST00000590530 EFCAB5A4FU69 1503 aa26.68■■□□□ 1.86
GCDH-212ENST00000590530 UGGT2Q9NYU1 1516 aa26.68■■□□□ 1.86
GCDH-212ENST00000590530 DISP1Q96F81 1524 aa26.64■■□□□ 1.86
GCDH-212ENST00000590530 TTBK1Q5TCY1 1321 aaPredicted RBP26.58■■□□□ 1.85
GCDH-212ENST00000590530 KIAA0556O60303 1618 aa26.56■■□□□ 1.84
GCDH-212ENST00000590530 CLASP1Q7Z460 1538 aa26.56■■□□□ 1.84
GCDH-212ENST00000590530 PRG4Q92954 1404 aaPredicted RBP26.53■■□□□ 1.84
GCDH-212ENST00000590530 OSCARQ8IYS5 282 aa26.49■■□□□ 1.83
GCDH-212ENST00000590530 ATP1B4Q9UN42 357 aaPredicted RBP26.49■■□□□ 1.83
GCDH-212ENST00000590530 PCF11O94913 1555 aaKnown RBP26.48■■□□□ 1.83
GCDH-212ENST00000590530 SHROOM2Q13796 1616 aa26.47■■□□□ 1.83
GCDH-212ENST00000590530 ERCC6L2Q5T890 1561 aa26.47■■□□□ 1.83
GCDH-212ENST00000590530 FMN1Q68DA7 1419 aa26.47■■□□□ 1.83
GCDH-212ENST00000590530 CARMIL2Q6F5E8 1435 aa26.45■■□□□ 1.83
GCDH-212ENST00000590530 TRIM26Q12899 539 aaPredicted RBP26.43■■□□□ 1.82
GCDH-212ENST00000590530 CASKIN1Q8WXD9 1431 aa26.42■■□□□ 1.82
GCDH-212ENST00000590530 KANK4Q5T7N3 995 aaPredicted RBP26.4■■□□□ 1.82
GCDH-212ENST00000590530 APLP2Q06481 763 aa26.4■■□□□ 1.82
GCDH-212ENST00000590530 FYCO1Q9BQS8 1478 aa26.37■■□□□ 1.81
GCDH-212ENST00000590530 ARID3CA6NKF2 412 aa26.36■■□□□ 1.81
GCDH-212ENST00000590530 PCGF6Q9BYE7 350 aa26.36■■□□□ 1.81
GCDH-212ENST00000590530 PLB1Q6P1J6 1458 aa26.34■■□□□ 1.81
GCDH-212ENST00000590530 PTPRGP23470 1445 aa26.31■■□□□ 1.8
GCDH-212ENST00000590530 LRRIQ1Q96JM4 1722 aa26.29■■□□□ 1.8
GCDH-212ENST00000590530 TIAM1Q13009 1591 aa26.28■■□□□ 1.8
GCDH-212ENST00000590530 NUP153P49790 1475 aaKnown RBP26.25■■□□□ 1.79
GCDH-212ENST00000590530 RAPGEF6Q8TEU7 1601 aa26.24■■□□□ 1.79
GCDH-212ENST00000590530 CDK13Q14004 1512 aaKnown RBP26.23■■□□□ 1.79
GCDH-212ENST00000590530 MAP3K1Q13233 1512 aa26.22■■□□□ 1.79
GCDH-212ENST00000590530 HECW1Q76N89 1606 aa26.22■■□□□ 1.79
GCDH-212ENST00000590530 EPRSP07814 1512 aaKnown RBP26.21■■□□□ 1.79
GCDH-212ENST00000590530 ABCA8O94911 1581 aa26.21■■□□□ 1.79
GCDH-212ENST00000590530 CFAP43Q8NDM7 1665 aa26.2■■□□□ 1.78
GCDH-212ENST00000590530 LRRC9Q6ZRR7 1453 aa26.19■■□□□ 1.78
GCDH-212ENST00000590530 MAGI3Q5TCQ9 1506 aa26.14■■□□□ 1.78
GCDH-212ENST00000590530 UACAQ9BZF9 1416 aa26.14■■□□□ 1.77
GCDH-212ENST00000590530 CCDC18Q5T9S5 1454 aa26.12■■□□□ 1.77
GCDH-212ENST00000590530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.12■■□□□ 1.77
GCDH-212ENST00000590530 HNRNPUL2Q1KMD3 747 aaKnown RBP26.12■■□□□ 1.77
GCDH-212ENST00000590530 ATP10BO94823 1461 aa26.09■■□□□ 1.77
GCDH-212ENST00000590530 MTUS2Q5JR59 1369 aa26.08■■□□□ 1.77
GCDH-212ENST00000590530 ARHGEF11O15085 1522 aa26.05■■□□□ 1.76
GCDH-212ENST00000590530 ABCC2Q92887 1545 aa26.03■■□□□ 1.76
GCDH-212ENST00000590530 PHLDB1Q86UU1 1377 aa26.02■■□□□ 1.76
GCDH-212ENST00000590530 EHBP1L1Q8N3D4 1523 aa25.98■■□□□ 1.75
GCDH-212ENST00000590530 UHRF1BP1LA0JNW5 1464 aa25.97■■□□□ 1.75
GCDH-212ENST00000590530 ADCY10Q96PN6 1610 aa25.96■■□□□ 1.75
GCDH-212ENST00000590530 NCOA2Q15596 1464 aa25.95■■□□□ 1.74
GCDH-212ENST00000590530 RIMBP3CA6NJZ7 1639 aa25.93■■□□□ 1.74
GCDH-212ENST00000590530 RIMBP3BA6NNM3 1639 aa25.93■■□□□ 1.74
GCDH-212ENST00000590530 RIMBP3Q9UFD9 1639 aa25.93■■□□□ 1.74
GCDH-212ENST00000590530 CDK11AQ9UQ88 783 aaPredicted RBP25.93■■□□□ 1.74
GCDH-212ENST00000590530 TROQ12816 1431 aaPredicted RBP25.91■■□□□ 1.74
GCDH-212ENST00000590530 PLEKHD1A6NEE1 506 aa25.91■■□□□ 1.74
GCDH-212ENST00000590530 CYB5RLQ6IPT4 315 aa25.9■■□□□ 1.74
GCDH-212ENST00000590530 KDM5BQ9UGL1 1544 aa25.9■■□□□ 1.74
GCDH-212ENST00000590530 SUPT6HQ7KZ85 1726 aaKnown RBP25.87■■□□□ 1.73
GCDH-212ENST00000590530 ZCCHC11Q5TAX3 1644 aaKnown RBP25.87■■□□□ 1.73
GCDH-212ENST00000590530 RRBP1Q9P2E9 1410 aaKnown RBP25.86■■□□□ 1.73
GCDH-212ENST00000590530 KIF14Q15058 1648 aa25.85■■□□□ 1.73
GCDH-212ENST00000590530 CCNB3Q8WWL7 1395 aa25.83■■□□□ 1.73
GCDH-212ENST00000590530 MYOM3Q5VTT5 1437 aa25.79■■□□□ 1.72
GCDH-212ENST00000590530 KCNH8Q96L42 1107 aa25.79■■□□□ 1.72
GCDH-212ENST00000590530 FGD6Q6ZV73 1430 aa25.78■■□□□ 1.72
GCDH-212ENST00000590530 FAM50AQ14320 339 aaKnown RBP25.77■■□□□ 1.72
GCDH-212ENST00000590530 ABCC10Q5T3U5 1492 aa25.74■■□□□ 1.71
GCDH-212ENST00000590530 HRCP23327 699 aa25.73■■□□□ 1.71
GCDH-212ENST00000590530 ITGAEP38570 1179 aa25.73■■□□□ 1.71
GCDH-212ENST00000590530 NPM1P06748 294 aaKnown RBP eCLIP25.7■■□□□ 1.71
GCDH-212ENST00000590530 GPATCH8Q9UKJ3 1502 aaKnown RBP25.7■■□□□ 1.71
GCDH-212ENST00000590530 ASXL2Q76L83 1435 aa25.7■■□□□ 1.7
GCDH-212ENST00000590530 ZNF644Q9H582 1327 aaPredicted RBP25.68■■□□□ 1.7
GCDH-212ENST00000590530 WDR7Q9Y4E6 1490 aa25.67■■□□□ 1.7
GCDH-212ENST00000590530 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.66■■□□□ 1.7
GCDH-212ENST00000590530 TTC37Q6PGP7 1564 aa25.65■■□□□ 1.7
GCDH-212ENST00000590530 PTPN23Q9H3S7 1636 aa25.64■■□□□ 1.69
GCDH-212ENST00000590530 CFDP1Q9UEE9 299 aaPredicted RBP25.63■■□□□ 1.69
GCDH-212ENST00000590530 MIA2Q96PC5 1412 aa25.63■■□□□ 1.69
GCDH-212ENST00000590530 ZNF777Q9ULD5 760 aaPredicted RBP25.61■■□□□ 1.69
GCDH-212ENST00000590530 TCOF1Q13428 1488 aaKnown RBP25.6■■□□□ 1.69
GCDH-212ENST00000590530 CDC42BPAQ5VT25 1732 aa25.59■■□□□ 1.69
GCDH-212ENST00000590530 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.59■■□□□ 1.69
GCDH-212ENST00000590530 PTPRKQ15262 1439 aa25.58■■□□□ 1.69
GCDH-212ENST00000590530 ITSN2Q9NZM3 1697 aa25.53■■□□□ 1.68
GCDH-212ENST00000590530 CAMSAP2Q08AD1 1489 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms