RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 ERCC6L2Q5T890 1561 aa23.6■■□□□ 1.37
SCAMP4-212ENST00000590266 PRG4Q92954 1404 aaPredicted RBP23.58■■□□□ 1.36
SCAMP4-212ENST00000590266 RAPGEF2Q9Y4G8 1499 aa23.56■■□□□ 1.36
SCAMP4-212ENST00000590266 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
SCAMP4-212ENST00000590266 KIAA0586Q9BVV6 1533 aa23.55■■□□□ 1.36
SCAMP4-212ENST00000590266 SHROOM2Q13796 1616 aa23.55■■□□□ 1.36
SCAMP4-212ENST00000590266 FAM9AQ8IZU1 332 aaPredicted RBP23.52■■□□□ 1.36
SCAMP4-212ENST00000590266 CSRNP3Q8WYN3 585 aa23.46■■□□□ 1.35
SCAMP4-212ENST00000590266 PRXQ9BXM0 1461 aa23.43■■□□□ 1.34
SCAMP4-212ENST00000590266 TTBK1Q5TCY1 1321 aaPredicted RBP23.42■■□□□ 1.34
SCAMP4-212ENST00000590266 IQGAP2Q13576 1575 aa23.42■■□□□ 1.34
SCAMP4-212ENST00000590266 EEA1Q15075 1411 aa23.41■■□□□ 1.34
SCAMP4-212ENST00000590266 CARMIL2Q6F5E8 1435 aa23.35■■□□□ 1.33
SCAMP4-212ENST00000590266 EHMT2Q96KQ7 1210 aa23.31■■□□□ 1.32
SCAMP4-212ENST00000590266 PTPRGP23470 1445 aa23.28■■□□□ 1.32
SCAMP4-212ENST00000590266 TNIKQ9UKE5 1360 aa23.27■■□□□ 1.32
SCAMP4-212ENST00000590266 DISP1Q96F81 1524 aa23.26■■□□□ 1.31
SCAMP4-212ENST00000590266 UGGT2Q9NYU1 1516 aa23.26■■□□□ 1.31
SCAMP4-212ENST00000590266 CTTNBP2Q8WZ74 1663 aa23.24■■□□□ 1.31
SCAMP4-212ENST00000590266 RANGAP1P46060 587 aaPredicted RBP23.22■■□□□ 1.31
SCAMP4-212ENST00000590266 NPM1P06748 294 aaKnown RBP eCLIP23.21■■□□□ 1.31
SCAMP4-212ENST00000590266 KIAA0556O60303 1618 aa23.19■■□□□ 1.3
SCAMP4-212ENST00000590266 P3H3Q8IVL6 736 aa23.16■■□□□ 1.3
SCAMP4-212ENST00000590266 GOLGA3Q08378 1498 aa23.16■■□□□ 1.3
SCAMP4-212ENST00000590266 ADCY10Q96PN6 1610 aa23.15■■□□□ 1.3
SCAMP4-212ENST00000590266 KIF21BO75037 1637 aa23.15■■□□□ 1.3
SCAMP4-212ENST00000590266 UBTFP17480 764 aaKnown RBP23.13■■□□□ 1.29
SCAMP4-212ENST00000590266 UACAQ9BZF9 1416 aa23.09■■□□□ 1.29
SCAMP4-212ENST00000590266 ABCC2Q92887 1545 aa23.03■■□□□ 1.28
SCAMP4-212ENST00000590266 PLB1Q6P1J6 1458 aa23.03■■□□□ 1.28
SCAMP4-212ENST00000590266 FAM69CQ0P6D2 419 aa23.02■■□□□ 1.28
SCAMP4-212ENST00000590266 UHRF1BP1LA0JNW5 1464 aa23.02■■□□□ 1.28
SCAMP4-212ENST00000590266 MAPKBP1O60336 1514 aa22.99■■□□□ 1.27
SCAMP4-212ENST00000590266 SAMD9Q5K651 1589 aa22.97■■□□□ 1.27
SCAMP4-212ENST00000590266 AEBP2Q6ZN18 517 aaPredicted RBP22.97■■□□□ 1.27
SCAMP4-212ENST00000590266 FHOD3Q2V2M9 1422 aa22.97■■□□□ 1.27
SCAMP4-212ENST00000590266 ARID3CA6NKF2 412 aa22.96■■□□□ 1.27
SCAMP4-212ENST00000590266 ABCC10Q5T3U5 1492 aa22.94■■□□□ 1.26
SCAMP4-212ENST00000590266 ASXL2Q76L83 1435 aa22.93■■□□□ 1.26
SCAMP4-212ENST00000590266 ABCA8O94911 1581 aa22.92■■□□□ 1.26
SCAMP4-212ENST00000590266 KDM5BQ9UGL1 1544 aa22.92■■□□□ 1.26
SCAMP4-212ENST00000590266 EFCAB5A4FU69 1503 aa22.88■■□□□ 1.25
SCAMP4-212ENST00000590266 ZCCHC11Q5TAX3 1644 aaKnown RBP22.88■■□□□ 1.25
SCAMP4-212ENST00000590266 DIP2BQ9P265 1576 aa22.88■■□□□ 1.25
SCAMP4-212ENST00000590266 KIF13AQ9H1H9 1805 aa22.87■■□□□ 1.25
SCAMP4-212ENST00000590266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.84■■□□□ 1.25
SCAMP4-212ENST00000590266 HNRNPUL2Q1KMD3 747 aaKnown RBP22.84■■□□□ 1.25
SCAMP4-212ENST00000590266 ARHGAP35Q9NRY4 1499 aa22.81■■□□□ 1.24
SCAMP4-212ENST00000590266 RAPGEF6Q8TEU7 1601 aa22.8■■□□□ 1.24
SCAMP4-212ENST00000590266 WDR7Q9Y4E6 1490 aa22.79■■□□□ 1.24
SCAMP4-212ENST00000590266 KCNH8Q96L42 1107 aa22.79■■□□□ 1.24
SCAMP4-212ENST00000590266 ATP1B4Q9UN42 357 aaPredicted RBP22.78■■□□□ 1.24
SCAMP4-212ENST00000590266 ATP10BO94823 1461 aa22.78■■□□□ 1.24
SCAMP4-212ENST00000590266 EPRSP07814 1512 aaKnown RBP22.77■■□□□ 1.24
SCAMP4-212ENST00000590266 NUP153P49790 1475 aaKnown RBP22.75■■□□□ 1.23
SCAMP4-212ENST00000590266 FMN1Q68DA7 1419 aa22.72■■□□□ 1.23
SCAMP4-212ENST00000590266 GLI2P10070 1586 aa22.7■■□□□ 1.22
SCAMP4-212ENST00000590266 CLIP1P30622 1438 aa22.69■■□□□ 1.22
SCAMP4-212ENST00000590266 LOC105371045A0A1W2PR82 267 aa22.67■■□□□ 1.22
SCAMP4-212ENST00000590266 KDM6BO15054 1643 aa22.67■■□□□ 1.22
SCAMP4-212ENST00000590266 TSPOAP1O95153 1857 aa22.66■■□□□ 1.22
SCAMP4-212ENST00000590266 CDK13Q14004 1512 aaKnown RBP22.63■■□□□ 1.21
SCAMP4-212ENST00000590266 PLEKHD1A6NEE1 506 aa22.63■■□□□ 1.21
SCAMP4-212ENST00000590266 CD109Q6YHK3 1445 aa22.61■■□□□ 1.21
SCAMP4-212ENST00000590266 HECW1Q76N89 1606 aa22.6■■□□□ 1.21
SCAMP4-212ENST00000590266 MAP3K4Q9Y6R4 1608 aa22.6■■□□□ 1.21
SCAMP4-212ENST00000590266 CEP162Q5TB80 1403 aa22.57■■□□□ 1.2
SCAMP4-212ENST00000590266 TEX14Q8IWB6 1497 aa22.57■■□□□ 1.2
SCAMP4-212ENST00000590266 PPRC1Q5VV67 1664 aaKnown RBP22.55■■□□□ 1.2
SCAMP4-212ENST00000590266 PCF11O94913 1555 aaKnown RBP22.54■■□□□ 1.2
SCAMP4-212ENST00000590266 CASKIN1Q8WXD9 1431 aa22.52■■□□□ 1.2
SCAMP4-212ENST00000590266 CFAP43Q8NDM7 1665 aa22.52■■□□□ 1.2
SCAMP4-212ENST00000590266 CDK11AQ9UQ88 783 aaPredicted RBP22.51■■□□□ 1.19
SCAMP4-212ENST00000590266 MAGI3Q5TCQ9 1506 aa22.5■■□□□ 1.19
SCAMP4-212ENST00000590266 ABCA9Q8IUA7 1624 aa22.47■■□□□ 1.19
SCAMP4-212ENST00000590266 FYCO1Q9BQS8 1478 aa22.47■■□□□ 1.19
SCAMP4-212ENST00000590266 COL17A1Q9UMD9 1497 aaPredicted RBP22.45■■□□□ 1.18
SCAMP4-212ENST00000590266 CCDC18Q5T9S5 1454 aa22.43■■□□□ 1.18
SCAMP4-212ENST00000590266 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.42■■□□□ 1.18
SCAMP4-212ENST00000590266 TROQ12816 1431 aaPredicted RBP22.4■■□□□ 1.18
SCAMP4-212ENST00000590266 KDM4FA0A1W2PPD8 638 aa22.4■■□□□ 1.18
SCAMP4-212ENST00000590266 TTC37Q6PGP7 1564 aa22.39■■□□□ 1.18
SCAMP4-212ENST00000590266 LRRIQ1Q96JM4 1722 aa22.39■■□□□ 1.17
SCAMP4-212ENST00000590266 KIF14Q15058 1648 aa22.35■■□□□ 1.17
SCAMP4-212ENST00000590266 NEO1Q92859 1461 aa22.34■■□□□ 1.17
SCAMP4-212ENST00000590266 FANCAO15360 1455 aa22.33■■□□□ 1.16
SCAMP4-212ENST00000590266 PHLDB1Q86UU1 1377 aa22.31■■□□□ 1.16
SCAMP4-212ENST00000590266 RAPGEF3O95398 923 aa22.31■■□□□ 1.16
SCAMP4-212ENST00000590266 ARAP3Q8WWN8 1544 aa22.3■■□□□ 1.16
SCAMP4-212ENST00000590266 PLCH2O75038 1416 aa22.3■■□□□ 1.16
SCAMP4-212ENST00000590266 AKNAQ7Z591 1439 aa22.29■■□□□ 1.16
SCAMP4-212ENST00000590266 MTUS2Q5JR59 1369 aa22.28■■□□□ 1.16
SCAMP4-212ENST00000590266 VPS8Q8N3P4 1428 aa22.28■■□□□ 1.16
SCAMP4-212ENST00000590266 ADGRL1O94910 1474 aa22.27■■□□□ 1.16
SCAMP4-212ENST00000590266 EFCAB2Q5VUJ9 269 aa22.25■■□□□ 1.15
SCAMP4-212ENST00000590266 ARHGAP5Q13017 1502 aa22.24■■□□□ 1.15
SCAMP4-212ENST00000590266 CFAP74Q9C0B2 1584 aa22.24■■□□□ 1.15
SCAMP4-212ENST00000590266 DENND4BO75064 1496 aaPredicted RBP22.22■■□□□ 1.15
SCAMP4-212ENST00000590266 MYO5CQ9NQX4 1742 aa22.2■■□□□ 1.14
SCAMP4-212ENST00000590266 SCAPERQ9BY12 1400 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms