RNA–Protein interactions for RNA: ENST00000589877.5

SMAD2-211, Transcript of SMAD family member 2, humanhuman

TSL 3

Gene SMAD2, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-211ENST00000589877 RUSC2Q8N2Y8 1516 aa29.13■■■□□ 2.25
SMAD2-211ENST00000589877 CUL7Q14999 1698 aa29.08■■■□□ 2.25
SMAD2-211ENST00000589877 KIAA0586Q9BVV6 1533 aa29.06■■■□□ 2.24
SMAD2-211ENST00000589877 CARMIL1Q5VZK9 1371 aa29.03■■■□□ 2.24
SMAD2-211ENST00000589877 NPM1P06748 294 aaKnown RBP eCLIP28.92■■■□□ 2.22
SMAD2-211ENST00000589877 KIF13AQ9H1H9 1805 aa28.84■■■□□ 2.21
SMAD2-211ENST00000589877 ADCY10Q96PN6 1610 aa28.83■■■□□ 2.21
SMAD2-211ENST00000589877 PTPRGP23470 1445 aa28.79■■■□□ 2.2
SMAD2-211ENST00000589877 FAM69CQ0P6D2 419 aa28.79■■■□□ 2.2
SMAD2-211ENST00000589877 MAPKBP1O60336 1514 aa28.78■■■□□ 2.2
SMAD2-211ENST00000589877 ABCC10Q5T3U5 1492 aa28.78■■■□□ 2.2
SMAD2-211ENST00000589877 CARMIL2Q6F5E8 1435 aa28.77■■■□□ 2.2
SMAD2-211ENST00000589877 IQGAP2Q13576 1575 aa28.75■■■□□ 2.19
SMAD2-211ENST00000589877 RAPGEF2Q9Y4G8 1499 aa28.75■■■□□ 2.19
SMAD2-211ENST00000589877 TTBK1Q5TCY1 1321 aaPredicted RBP28.74■■■□□ 2.19
SMAD2-211ENST00000589877 TNIKQ9UKE5 1360 aa28.74■■■□□ 2.19
SMAD2-211ENST00000589877 DIP2BQ9P265 1576 aa28.66■■■□□ 2.18
SMAD2-211ENST00000589877 DISP1Q96F81 1524 aa28.64■■■□□ 2.18
SMAD2-211ENST00000589877 AEBP2Q6ZN18 517 aaPredicted RBP28.61■■■□□ 2.17
SMAD2-211ENST00000589877 UGGT2Q9NYU1 1516 aa28.6■■■□□ 2.17
SMAD2-211ENST00000589877 ABCC2Q92887 1545 aa28.59■■■□□ 2.17
SMAD2-211ENST00000589877 UACAQ9BZF9 1416 aa28.57■■■□□ 2.16
SMAD2-211ENST00000589877 UHRF1BP1LA0JNW5 1464 aa28.56■■■□□ 2.16
SMAD2-211ENST00000589877 ASXL2Q76L83 1435 aa28.5■■■□□ 2.15
SMAD2-211ENST00000589877 KIAA0556O60303 1618 aa28.49■■■□□ 2.15
SMAD2-211ENST00000589877 PRXQ9BXM0 1461 aa28.48■■■□□ 2.15
SMAD2-211ENST00000589877 PLB1Q6P1J6 1458 aa28.47■■■□□ 2.15
SMAD2-211ENST00000589877 TSPOAP1O95153 1857 aa28.46■■■□□ 2.15
SMAD2-211ENST00000589877 CTTNBP2Q8WZ74 1663 aa28.45■■■□□ 2.14
SMAD2-211ENST00000589877 KDM5BQ9UGL1 1544 aa28.43■■■□□ 2.14
SMAD2-211ENST00000589877 GLI2P10070 1586 aa28.39■■■□□ 2.14
SMAD2-211ENST00000589877 KDM6BO15054 1643 aa28.38■■■□□ 2.13
SMAD2-211ENST00000589877 GOLGA3Q08378 1498 aa28.38■■■□□ 2.13
SMAD2-211ENST00000589877 CSRNP3Q8WYN3 585 aa28.35■■■□□ 2.13
SMAD2-211ENST00000589877 ZCCHC11Q5TAX3 1644 aaKnown RBP28.34■■■□□ 2.13
SMAD2-211ENST00000589877 EPRSP07814 1512 aaKnown RBP28.32■■■□□ 2.12
SMAD2-211ENST00000589877 PPRC1Q5VV67 1664 aaKnown RBP28.29■■■□□ 2.12
SMAD2-211ENST00000589877 ABCA8O94911 1581 aa28.24■■■□□ 2.11
SMAD2-211ENST00000589877 MAP3K4Q9Y6R4 1608 aa28.21■■■□□ 2.11
SMAD2-211ENST00000589877 WDR7Q9Y4E6 1490 aa28.21■■■□□ 2.11
SMAD2-211ENST00000589877 P3H3Q8IVL6 736 aa28.21■■■□□ 2.11
SMAD2-211ENST00000589877 FAM9AQ8IZU1 332 aaPredicted RBP28.19■■■□□ 2.1
SMAD2-211ENST00000589877 EEA1Q15075 1411 aa28.18■■■□□ 2.1
SMAD2-211ENST00000589877 KCNH8Q96L42 1107 aa28.16■■■□□ 2.1
SMAD2-211ENST00000589877 TEX14Q8IWB6 1497 aa28.15■■■□□ 2.1
SMAD2-211ENST00000589877 COL17A1Q9UMD9 1497 aaPredicted RBP28.15■■■□□ 2.1
SMAD2-211ENST00000589877 KDM4FA0A1W2PPD8 638 aa28.14■■■□□ 2.1
SMAD2-211ENST00000589877 SAMD9Q5K651 1589 aa28.07■■■□□ 2.08
SMAD2-211ENST00000589877 CD109Q6YHK3 1445 aa28.07■■■□□ 2.08
SMAD2-211ENST00000589877 ARID3CA6NKF2 412 aa28.06■■■□□ 2.08
SMAD2-211ENST00000589877 ATP10BO94823 1461 aa28.06■■■□□ 2.08
SMAD2-211ENST00000589877 CFAP43Q8NDM7 1665 aa28.03■■■□□ 2.08
SMAD2-211ENST00000589877 MAGI3Q5TCQ9 1506 aa28.02■■■□□ 2.08
SMAD2-211ENST00000589877 RANGAP1P46060 587 aaPredicted RBP28.02■■■□□ 2.08
SMAD2-211ENST00000589877 RAPGEF6Q8TEU7 1601 aa27.95■■■□□ 2.06
SMAD2-211ENST00000589877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.92■■■□□ 2.06
SMAD2-211ENST00000589877 HNRNPUL2Q1KMD3 747 aaKnown RBP27.92■■■□□ 2.06
SMAD2-211ENST00000589877 CHIC1Q5VXU3 224 aa27.92■■■□□ 2.06
SMAD2-211ENST00000589877 KIF21BO75037 1637 aa27.92■■■□□ 2.06
SMAD2-211ENST00000589877 FHOD3Q2V2M9 1422 aa27.91■■■□□ 2.06
SMAD2-211ENST00000589877 ADGRL1O94910 1474 aa27.87■■■□□ 2.05
SMAD2-211ENST00000589877 NUP153P49790 1475 aaKnown RBP27.87■■■□□ 2.05
SMAD2-211ENST00000589877 ABCA9Q8IUA7 1624 aa27.84■■■□□ 2.05
SMAD2-211ENST00000589877 EFCAB5A4FU69 1503 aa27.81■■■□□ 2.04
SMAD2-211ENST00000589877 ARAP3Q8WWN8 1544 aa27.81■■■□□ 2.04
SMAD2-211ENST00000589877 UBTFP17480 764 aaKnown RBP27.8■■■□□ 2.04
SMAD2-211ENST00000589877 EHMT2Q96KQ7 1210 aa27.8■■■□□ 2.04
SMAD2-211ENST00000589877 PHLDB1Q86UU1 1377 aa27.79■■■□□ 2.04
SMAD2-211ENST00000589877 PLEKHD1A6NEE1 506 aa27.78■■■□□ 2.04
SMAD2-211ENST00000589877 NEO1Q92859 1461 aa27.7■■■□□ 2.03
SMAD2-211ENST00000589877 RAPGEF3O95398 923 aa27.69■■■□□ 2.02
SMAD2-211ENST00000589877 ARHGAP35Q9NRY4 1499 aa27.62■■■□□ 2.01
SMAD2-211ENST00000589877 FMN1Q68DA7 1419 aa27.6■■■□□ 2.01
SMAD2-211ENST00000589877 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.6■■■□□ 2.01
SMAD2-211ENST00000589877 CDK13Q14004 1512 aaKnown RBP27.59■■■□□ 2.01
SMAD2-211ENST00000589877 ATP1B4Q9UN42 357 aaPredicted RBP27.59■■■□□ 2.01
SMAD2-211ENST00000589877 AKNAQ7Z591 1439 aa27.56■■■□□ 2
SMAD2-211ENST00000589877 FRMPD1Q5SYB0 1578 aa27.53■■■□□ 2
SMAD2-211ENST00000589877 FANCAO15360 1455 aa27.53■■■□□ 2
SMAD2-211ENST00000589877 TTC37Q6PGP7 1564 aa27.52■■■□□ 2
SMAD2-211ENST00000589877 DENND4BO75064 1496 aaPredicted RBP27.51■■■□□ 2
SMAD2-211ENST00000589877 HECW1Q76N89 1606 aa27.5■■□□□ 1.99
SMAD2-211ENST00000589877 CDK11AQ9UQ88 783 aaPredicted RBP27.5■■□□□ 1.99
SMAD2-211ENST00000589877 CFAP74Q9C0B2 1584 aa27.48■■□□□ 1.99
SMAD2-211ENST00000589877 PLCH2O75038 1416 aa27.46■■□□□ 1.99
SMAD2-211ENST00000589877 RICTORQ6R327 1708 aa27.45■■□□□ 1.99
SMAD2-211ENST00000589877 HECW2Q9P2P5 1572 aa27.44■■□□□ 1.98
SMAD2-211ENST00000589877 ARID4BQ4LE39 1312 aaPredicted RBP27.43■■□□□ 1.98
SMAD2-211ENST00000589877 ADAMTSL3P82987 1691 aa27.42■■□□□ 1.98
SMAD2-211ENST00000589877 EFCAB2Q5VUJ9 269 aa27.38■■□□□ 1.97
SMAD2-211ENST00000589877 SCAPERQ9BY12 1400 aa27.38■■□□□ 1.97
SMAD2-211ENST00000589877 ARHGEF40Q8TER5 1519 aa27.37■■□□□ 1.97
SMAD2-211ENST00000589877 TROQ12816 1431 aaPredicted RBP27.37■■□□□ 1.97
SMAD2-211ENST00000589877 PTPRMP28827 1452 aa27.37■■□□□ 1.97
SMAD2-211ENST00000589877 BCORL1Q5H9F3 1711 aa27.36■■□□□ 1.97
SMAD2-211ENST00000589877 LRRIQ1Q96JM4 1722 aa27.35■■□□□ 1.97
SMAD2-211ENST00000589877 ZMYM4Q5VZL5 1548 aa27.35■■□□□ 1.97
SMAD2-211ENST00000589877 KIF14Q15058 1648 aa27.34■■□□□ 1.97
SMAD2-211ENST00000589877 MYO5CQ9NQX4 1742 aa27.33■■□□□ 1.96
SMAD2-211ENST00000589877 MAGI2Q86UL8 1455 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms