RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 CUL7Q14999 1698 aa24.88■■□□□ 1.57
MBD1-220ENST00000589758 RUSC2Q8N2Y8 1516 aa24.86■■□□□ 1.57
MBD1-220ENST00000589758 KIAA0586Q9BVV6 1533 aa24.8■■□□□ 1.56
MBD1-220ENST00000589758 CARMIL1Q5VZK9 1371 aa24.76■■□□□ 1.55
MBD1-220ENST00000589758 NPM1P06748 294 aaKnown RBP eCLIP24.64■■□□□ 1.54
MBD1-220ENST00000589758 CARMIL2Q6F5E8 1435 aa24.58■■□□□ 1.53
MBD1-220ENST00000589758 RAPGEF2Q9Y4G8 1499 aa24.57■■□□□ 1.52
MBD1-220ENST00000589758 IQGAP2Q13576 1575 aa24.56■■□□□ 1.52
MBD1-220ENST00000589758 ADCY10Q96PN6 1610 aa24.55■■□□□ 1.52
MBD1-220ENST00000589758 PTPRGP23470 1445 aa24.53■■□□□ 1.52
MBD1-220ENST00000589758 MAPKBP1O60336 1514 aa24.53■■□□□ 1.52
MBD1-220ENST00000589758 KIF13AQ9H1H9 1805 aa24.53■■□□□ 1.52
MBD1-220ENST00000589758 TNIKQ9UKE5 1360 aa24.52■■□□□ 1.52
MBD1-220ENST00000589758 ABCC10Q5T3U5 1492 aa24.49■■□□□ 1.51
MBD1-220ENST00000589758 FAM69CQ0P6D2 419 aa24.46■■□□□ 1.51
MBD1-220ENST00000589758 TTBK1Q5TCY1 1321 aaPredicted RBP24.43■■□□□ 1.5
MBD1-220ENST00000589758 UGGT2Q9NYU1 1516 aa24.42■■□□□ 1.5
MBD1-220ENST00000589758 DIP2BQ9P265 1576 aa24.42■■□□□ 1.5
MBD1-220ENST00000589758 DISP1Q96F81 1524 aa24.41■■□□□ 1.5
MBD1-220ENST00000589758 ABCC2Q92887 1545 aa24.37■■□□□ 1.49
MBD1-220ENST00000589758 UHRF1BP1LA0JNW5 1464 aa24.36■■□□□ 1.49
MBD1-220ENST00000589758 AEBP2Q6ZN18 517 aaPredicted RBP24.35■■□□□ 1.49
MBD1-220ENST00000589758 UACAQ9BZF9 1416 aa24.35■■□□□ 1.49
MBD1-220ENST00000589758 CTTNBP2Q8WZ74 1663 aa24.34■■□□□ 1.49
MBD1-220ENST00000589758 PRXQ9BXM0 1461 aa24.33■■□□□ 1.49
MBD1-220ENST00000589758 KIAA0556O60303 1618 aa24.33■■□□□ 1.49
MBD1-220ENST00000589758 PLB1Q6P1J6 1458 aa24.29■■□□□ 1.48
MBD1-220ENST00000589758 GOLGA3Q08378 1498 aa24.27■■□□□ 1.48
MBD1-220ENST00000589758 ASXL2Q76L83 1435 aa24.27■■□□□ 1.48
MBD1-220ENST00000589758 KDM5BQ9UGL1 1544 aa24.24■■□□□ 1.47
MBD1-220ENST00000589758 TSPOAP1O95153 1857 aa24.21■■□□□ 1.47
MBD1-220ENST00000589758 CSRNP3Q8WYN3 585 aa24.21■■□□□ 1.47
MBD1-220ENST00000589758 GLI2P10070 1586 aa24.2■■□□□ 1.47
MBD1-220ENST00000589758 KDM6BO15054 1643 aa24.17■■□□□ 1.46
MBD1-220ENST00000589758 ZCCHC11Q5TAX3 1644 aaKnown RBP24.17■■□□□ 1.46
MBD1-220ENST00000589758 EEA1Q15075 1411 aa24.16■■□□□ 1.46
MBD1-220ENST00000589758 FAM9AQ8IZU1 332 aaPredicted RBP24.13■■□□□ 1.45
MBD1-220ENST00000589758 EPRSP07814 1512 aaKnown RBP24.13■■□□□ 1.45
MBD1-220ENST00000589758 ABCA8O94911 1581 aa24.1■■□□□ 1.45
MBD1-220ENST00000589758 PPRC1Q5VV67 1664 aaKnown RBP24.07■■□□□ 1.44
MBD1-220ENST00000589758 WDR7Q9Y4E6 1490 aa24.07■■□□□ 1.44
MBD1-220ENST00000589758 MAP3K4Q9Y6R4 1608 aa24.06■■□□□ 1.44
MBD1-220ENST00000589758 TEX14Q8IWB6 1497 aa24.02■■□□□ 1.44
MBD1-220ENST00000589758 P3H3Q8IVL6 736 aa24.01■■□□□ 1.43
MBD1-220ENST00000589758 SAMD9Q5K651 1589 aa23.99■■□□□ 1.43
MBD1-220ENST00000589758 KCNH8Q96L42 1107 aa23.94■■□□□ 1.42
MBD1-220ENST00000589758 CFAP43Q8NDM7 1665 aa23.92■■□□□ 1.42
MBD1-220ENST00000589758 KIF21BO75037 1637 aa23.92■■□□□ 1.42
MBD1-220ENST00000589758 CD109Q6YHK3 1445 aa23.91■■□□□ 1.42
MBD1-220ENST00000589758 ATP10BO94823 1461 aa23.9■■□□□ 1.42
MBD1-220ENST00000589758 MAGI3Q5TCQ9 1506 aa23.89■■□□□ 1.42
MBD1-220ENST00000589758 COL17A1Q9UMD9 1497 aaPredicted RBP23.89■■□□□ 1.42
MBD1-220ENST00000589758 RAPGEF6Q8TEU7 1601 aa23.88■■□□□ 1.41
MBD1-220ENST00000589758 ARID3CA6NKF2 412 aa23.86■■□□□ 1.41
MBD1-220ENST00000589758 RANGAP1P46060 587 aaPredicted RBP23.86■■□□□ 1.41
MBD1-220ENST00000589758 CHIC1Q5VXU3 224 aa23.86■■□□□ 1.41
MBD1-220ENST00000589758 KDM4FA0A1W2PPD8 638 aa23.85■■□□□ 1.41
MBD1-220ENST00000589758 EFCAB5A4FU69 1503 aa23.82■■□□□ 1.4
MBD1-220ENST00000589758 FHOD3Q2V2M9 1422 aa23.82■■□□□ 1.4
MBD1-220ENST00000589758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.8■■□□□ 1.4
MBD1-220ENST00000589758 HNRNPUL2Q1KMD3 747 aaKnown RBP23.8■■□□□ 1.4
MBD1-220ENST00000589758 NUP153P49790 1475 aaKnown RBP23.77■■□□□ 1.4
MBD1-220ENST00000589758 ABCA9Q8IUA7 1624 aa23.77■■□□□ 1.4
MBD1-220ENST00000589758 UBTFP17480 764 aaKnown RBP23.75■■□□□ 1.39
MBD1-220ENST00000589758 PHLDB1Q86UU1 1377 aa23.72■■□□□ 1.39
MBD1-220ENST00000589758 ARAP3Q8WWN8 1544 aa23.7■■□□□ 1.38
MBD1-220ENST00000589758 PLEKHD1A6NEE1 506 aa23.7■■□□□ 1.38
MBD1-220ENST00000589758 ADGRL1O94910 1474 aa23.69■■□□□ 1.38
MBD1-220ENST00000589758 EHMT2Q96KQ7 1210 aa23.67■■□□□ 1.38
MBD1-220ENST00000589758 NEO1Q92859 1461 aa23.64■■□□□ 1.38
MBD1-220ENST00000589758 FMN1Q68DA7 1419 aa23.61■■□□□ 1.37
MBD1-220ENST00000589758 ARHGAP35Q9NRY4 1499 aa23.59■■□□□ 1.37
MBD1-220ENST00000589758 HECW1Q76N89 1606 aa23.55■■□□□ 1.36
MBD1-220ENST00000589758 CDK13Q14004 1512 aaKnown RBP23.54■■□□□ 1.36
MBD1-220ENST00000589758 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.54■■□□□ 1.36
MBD1-220ENST00000589758 RAPGEF3O95398 923 aa23.53■■□□□ 1.36
MBD1-220ENST00000589758 ATP1B4Q9UN42 357 aaPredicted RBP23.53■■□□□ 1.36
MBD1-220ENST00000589758 CFAP74Q9C0B2 1584 aa23.52■■□□□ 1.36
MBD1-220ENST00000589758 CDK11AQ9UQ88 783 aaPredicted RBP23.5■■□□□ 1.35
MBD1-220ENST00000589758 FANCAO15360 1455 aa23.49■■□□□ 1.35
MBD1-220ENST00000589758 AKNAQ7Z591 1439 aa23.49■■□□□ 1.35
MBD1-220ENST00000589758 TTC37Q6PGP7 1564 aa23.48■■□□□ 1.35
MBD1-220ENST00000589758 DENND4BO75064 1496 aaPredicted RBP23.46■■□□□ 1.35
MBD1-220ENST00000589758 FRMPD1Q5SYB0 1578 aa23.46■■□□□ 1.35
MBD1-220ENST00000589758 PLCH2O75038 1416 aa23.42■■□□□ 1.34
MBD1-220ENST00000589758 RICTORQ6R327 1708 aa23.42■■□□□ 1.34
MBD1-220ENST00000589758 ILDR1Q86SU0 546 aaPredicted RBP23.39■■□□□ 1.33
MBD1-220ENST00000589758 TROQ12816 1431 aaPredicted RBP23.38■■□□□ 1.33
MBD1-220ENST00000589758 CLIP1P30622 1438 aa23.37■■□□□ 1.33
MBD1-220ENST00000589758 EFCAB2Q5VUJ9 269 aa23.36■■□□□ 1.33
MBD1-220ENST00000589758 KIF14Q15058 1648 aa23.36■■□□□ 1.33
MBD1-220ENST00000589758 MYO5CQ9NQX4 1742 aa23.36■■□□□ 1.33
MBD1-220ENST00000589758 CASKIN1Q8WXD9 1431 aa23.35■■□□□ 1.33
MBD1-220ENST00000589758 ZMYM4Q5VZL5 1548 aa23.35■■□□□ 1.33
MBD1-220ENST00000589758 ARHGEF40Q8TER5 1519 aa23.35■■□□□ 1.33
MBD1-220ENST00000589758 ARID4BQ4LE39 1312 aaPredicted RBP23.34■■□□□ 1.33
MBD1-220ENST00000589758 LRRIQ1Q96JM4 1722 aa23.34■■□□□ 1.33
MBD1-220ENST00000589758 ADAMTSL3P82987 1691 aa23.34■■□□□ 1.33
MBD1-220ENST00000589758 CCDC18Q5T9S5 1454 aa23.33■■□□□ 1.33
MBD1-220ENST00000589758 MAGI2Q86UL8 1455 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms