RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 RAPGEF2Q9Y4G8 1499 aa27.64■■■□□ 2.02
DNMT1-221ENST00000589538 JPH4Q96JJ6 628 aa27.63■■■□□ 2.01
DNMT1-221ENST00000589538 EEA1Q15075 1411 aa27.57■■■□□ 2
DNMT1-221ENST00000589538 PRG4Q92954 1404 aaPredicted RBP27.57■■■□□ 2
DNMT1-221ENST00000589538 ERCC6L2Q5T890 1561 aa27.56■■■□□ 2
DNMT1-221ENST00000589538 CHIC1Q5VXU3 224 aa27.53■■■□□ 2
DNMT1-221ENST00000589538 PRXQ9BXM0 1461 aa27.51■■□□□ 1.99
DNMT1-221ENST00000589538 IQGAP2Q13576 1575 aa27.49■■□□□ 1.99
DNMT1-221ENST00000589538 CSRNP3Q8WYN3 585 aa27.47■■□□□ 1.99
DNMT1-221ENST00000589538 CARMIL2Q6F5E8 1435 aa27.4■■□□□ 1.98
DNMT1-221ENST00000589538 CTTNBP2Q8WZ74 1663 aa27.4■■□□□ 1.98
DNMT1-221ENST00000589538 UGGT2Q9NYU1 1516 aa27.34■■□□□ 1.97
DNMT1-221ENST00000589538 TNIKQ9UKE5 1360 aa27.28■■□□□ 1.96
DNMT1-221ENST00000589538 FAM9AQ8IZU1 332 aaPredicted RBP27.28■■□□□ 1.96
DNMT1-221ENST00000589538 DISP1Q96F81 1524 aa27.26■■□□□ 1.95
DNMT1-221ENST00000589538 PTPRGP23470 1445 aa27.25■■□□□ 1.95
DNMT1-221ENST00000589538 KIF21BO75037 1637 aa27.23■■□□□ 1.95
DNMT1-221ENST00000589538 GOLGA3Q08378 1498 aa27.23■■□□□ 1.95
DNMT1-221ENST00000589538 KIAA0556O60303 1618 aa27.21■■□□□ 1.95
DNMT1-221ENST00000589538 TRHP20396 242 aaPredicted RBP27.19■■□□□ 1.94
DNMT1-221ENST00000589538 NPM1P06748 294 aaKnown RBP eCLIP27.16■■□□□ 1.94
DNMT1-221ENST00000589538 ADCY10Q96PN6 1610 aa27.16■■□□□ 1.94
DNMT1-221ENST00000589538 TTBK1Q5TCY1 1321 aaPredicted RBP27.11■■□□□ 1.93
DNMT1-221ENST00000589538 UHRF1BP1LA0JNW5 1464 aa27.08■■□□□ 1.93
DNMT1-221ENST00000589538 UACAQ9BZF9 1416 aa27.07■■□□□ 1.92
DNMT1-221ENST00000589538 MAPKBP1O60336 1514 aa27.05■■□□□ 1.92
DNMT1-221ENST00000589538 ABCC2Q92887 1545 aa27.03■■□□□ 1.92
DNMT1-221ENST00000589538 SAMD9Q5K651 1589 aa27.01■■□□□ 1.92
DNMT1-221ENST00000589538 UBTFP17480 764 aaKnown RBP26.98■■□□□ 1.91
DNMT1-221ENST00000589538 EFCAB5A4FU69 1503 aa26.93■■□□□ 1.9
DNMT1-221ENST00000589538 KDM5BQ9UGL1 1544 aa26.92■■□□□ 1.9
DNMT1-221ENST00000589538 ABCA8O94911 1581 aa26.92■■□□□ 1.9
DNMT1-221ENST00000589538 P3H3Q8IVL6 736 aa26.91■■□□□ 1.9
DNMT1-221ENST00000589538 ABCC10Q5T3U5 1492 aa26.91■■□□□ 1.9
DNMT1-221ENST00000589538 PLB1Q6P1J6 1458 aa26.91■■□□□ 1.9
DNMT1-221ENST00000589538 KIF13AQ9H1H9 1805 aa26.89■■□□□ 1.9
DNMT1-221ENST00000589538 EHMT2Q96KQ7 1210 aa26.88■■□□□ 1.89
DNMT1-221ENST00000589538 RANGAP1P46060 587 aaPredicted RBP26.87■■□□□ 1.89
DNMT1-221ENST00000589538 ZCCHC11Q5TAX3 1644 aaKnown RBP26.87■■□□□ 1.89
DNMT1-221ENST00000589538 DIP2BQ9P265 1576 aa26.85■■□□□ 1.89
DNMT1-221ENST00000589538 ASXL2Q76L83 1435 aa26.84■■□□□ 1.89
DNMT1-221ENST00000589538 FAM69CQ0P6D2 419 aa26.83■■□□□ 1.89
DNMT1-221ENST00000589538 FHOD3Q2V2M9 1422 aa26.81■■□□□ 1.88
DNMT1-221ENST00000589538 RAPGEF6Q8TEU7 1601 aa26.78■■□□□ 1.88
DNMT1-221ENST00000589538 GLI2P10070 1586 aa26.73■■□□□ 1.87
DNMT1-221ENST00000589538 WDR7Q9Y4E6 1490 aa26.71■■□□□ 1.87
DNMT1-221ENST00000589538 ARHGAP35Q9NRY4 1499 aa26.7■■□□□ 1.87
DNMT1-221ENST00000589538 EPRSP07814 1512 aaKnown RBP26.69■■□□□ 1.86
DNMT1-221ENST00000589538 ATP10BO94823 1461 aa26.68■■□□□ 1.86
DNMT1-221ENST00000589538 FMN1Q68DA7 1419 aa26.68■■□□□ 1.86
DNMT1-221ENST00000589538 NUP153P49790 1475 aaKnown RBP26.65■■□□□ 1.86
DNMT1-221ENST00000589538 TSPOAP1O95153 1857 aa26.62■■□□□ 1.85
DNMT1-221ENST00000589538 ARID3CA6NKF2 412 aa26.59■■□□□ 1.85
DNMT1-221ENST00000589538 MAP3K4Q9Y6R4 1608 aa26.58■■□□□ 1.85
DNMT1-221ENST00000589538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.58■■□□□ 1.85
DNMT1-221ENST00000589538 HNRNPUL2Q1KMD3 747 aaKnown RBP26.58■■□□□ 1.85
DNMT1-221ENST00000589538 KCNH8Q96L42 1107 aa26.55■■□□□ 1.84
DNMT1-221ENST00000589538 CLIP1P30622 1438 aa26.55■■□□□ 1.84
DNMT1-221ENST00000589538 HECW1Q76N89 1606 aa26.54■■□□□ 1.84
DNMT1-221ENST00000589538 CFAP43Q8NDM7 1665 aa26.54■■□□□ 1.84
DNMT1-221ENST00000589538 TEX14Q8IWB6 1497 aa26.52■■□□□ 1.84
DNMT1-221ENST00000589538 PPRC1Q5VV67 1664 aaKnown RBP26.51■■□□□ 1.83
DNMT1-221ENST00000589538 PLEKHD1A6NEE1 506 aa26.49■■□□□ 1.83
DNMT1-221ENST00000589538 CD109Q6YHK3 1445 aa26.48■■□□□ 1.83
DNMT1-221ENST00000589538 ATP1B4Q9UN42 357 aaPredicted RBP26.46■■□□□ 1.83
DNMT1-221ENST00000589538 KDM6BO15054 1643 aa26.46■■□□□ 1.83
DNMT1-221ENST00000589538 MAGI3Q5TCQ9 1506 aa26.44■■□□□ 1.82
DNMT1-221ENST00000589538 ABCA9Q8IUA7 1624 aa26.44■■□□□ 1.82
DNMT1-221ENST00000589538 CASKIN1Q8WXD9 1431 aa26.43■■□□□ 1.82
DNMT1-221ENST00000589538 CDK13Q14004 1512 aaKnown RBP26.43■■□□□ 1.82
DNMT1-221ENST00000589538 CDK11AQ9UQ88 783 aaPredicted RBP26.42■■□□□ 1.82
DNMT1-221ENST00000589538 CEP162Q5TB80 1403 aa26.41■■□□□ 1.82
DNMT1-221ENST00000589538 PCF11O94913 1555 aaKnown RBP26.39■■□□□ 1.82
DNMT1-221ENST00000589538 FYCO1Q9BQS8 1478 aa26.38■■□□□ 1.81
DNMT1-221ENST00000589538 CCDC18Q5T9S5 1454 aa26.37■■□□□ 1.81
DNMT1-221ENST00000589538 LOC105371045A0A1W2PR82 267 aa26.35■■□□□ 1.81
DNMT1-221ENST00000589538 LRRIQ1Q96JM4 1722 aa26.32■■□□□ 1.8
DNMT1-221ENST00000589538 PHLDB1Q86UU1 1377 aa26.31■■□□□ 1.8
DNMT1-221ENST00000589538 TROQ12816 1431 aaPredicted RBP26.28■■□□□ 1.8
DNMT1-221ENST00000589538 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.28■■□□□ 1.8
DNMT1-221ENST00000589538 NEO1Q92859 1461 aa26.25■■□□□ 1.79
DNMT1-221ENST00000589538 KIF14Q15058 1648 aa26.25■■□□□ 1.79
DNMT1-221ENST00000589538 TTC37Q6PGP7 1564 aa26.23■■□□□ 1.79
DNMT1-221ENST00000589538 COL17A1Q9UMD9 1497 aaPredicted RBP26.23■■□□□ 1.79
DNMT1-221ENST00000589538 ARAP3Q8WWN8 1544 aa26.22■■□□□ 1.79
DNMT1-221ENST00000589538 CFAP74Q9C0B2 1584 aa26.21■■□□□ 1.79
DNMT1-221ENST00000589538 PLCH2O75038 1416 aa26.15■■□□□ 1.78
DNMT1-221ENST00000589538 MYO5CQ9NQX4 1742 aa26.15■■□□□ 1.78
DNMT1-221ENST00000589538 FANCAO15360 1455 aa26.15■■□□□ 1.78
DNMT1-221ENST00000589538 VPS8Q8N3P4 1428 aa26.12■■□□□ 1.77
DNMT1-221ENST00000589538 AKNAQ7Z591 1439 aa26.11■■□□□ 1.77
DNMT1-221ENST00000589538 EFCAB2Q5VUJ9 269 aa26.07■■□□□ 1.76
DNMT1-221ENST00000589538 MTUS2Q5JR59 1369 aa26.07■■□□□ 1.76
DNMT1-221ENST00000589538 DENND4BO75064 1496 aaPredicted RBP26.04■■□□□ 1.76
DNMT1-221ENST00000589538 ARHGAP5Q13017 1502 aa26.04■■□□□ 1.76
DNMT1-221ENST00000589538 EHBP1L1Q8N3D4 1523 aa26.02■■□□□ 1.76
DNMT1-221ENST00000589538 PREX2Q70Z35 1606 aa26.02■■□□□ 1.76
DNMT1-221ENST00000589538 ADGRL1O94910 1474 aa26.01■■□□□ 1.75
DNMT1-221ENST00000589538 RAPGEF3O95398 923 aa26.01■■□□□ 1.75
DNMT1-221ENST00000589538 CDC42BPBQ9Y5S2 1711 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms