RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 IGF1RP08069 1367 aa41.72■■■■■ 4.27
LSM7-205ENST00000589532 JPH4Q96JJ6 628 aa41.64■■■■■ 4.26
LSM7-205ENST00000589532 KIAA0586Q9BVV6 1533 aa41.59■■■■■ 4.25
LSM7-205ENST00000589532 KIF13AQ9H1H9 1805 aa41.44■■■■■ 4.22
LSM7-205ENST00000589532 CARMIL1Q5VZK9 1371 aa41.4■■■■■ 4.22
LSM7-205ENST00000589532 ADCY10Q96PN6 1610 aa41.4■■■■■ 4.22
LSM7-205ENST00000589532 MAPKBP1O60336 1514 aa41.33■■■■■ 4.21
LSM7-205ENST00000589532 IQGAP2Q13576 1575 aa41.25■■■■■ 4.19
LSM7-205ENST00000589532 ABCC10Q5T3U5 1492 aa41.21■■■■■ 4.19
LSM7-205ENST00000589532 DIP2BQ9P265 1576 aa41.19■■■■■ 4.18
LSM7-205ENST00000589532 RAPGEF2Q9Y4G8 1499 aa41.1■■■■■ 4.17
LSM7-205ENST00000589532 PTPRGP23470 1445 aa41.07■■■■■ 4.16
LSM7-205ENST00000589532 CARMIL2Q6F5E8 1435 aa41.07■■■■■ 4.16
LSM7-205ENST00000589532 DISP1Q96F81 1524 aa41.07■■■■■ 4.16
LSM7-205ENST00000589532 TNIKQ9UKE5 1360 aa41.05■■■■■ 4.16
LSM7-205ENST00000589532 NPM1P06748 294 aaKnown RBP eCLIP41.03■■■■■ 4.16
LSM7-205ENST00000589532 UGGT2Q9NYU1 1516 aa41.02■■■■■ 4.16
LSM7-205ENST00000589532 FAM69CQ0P6D2 419 aa40.97■■■■■ 4.15
LSM7-205ENST00000589532 ABCC2Q92887 1545 aa40.97■■■■■ 4.15
LSM7-205ENST00000589532 UHRF1BP1LA0JNW5 1464 aa40.93■■■■■ 4.14
LSM7-205ENST00000589532 KIAA0556O60303 1618 aa40.91■■■■■ 4.14
LSM7-205ENST00000589532 CTTNBP2Q8WZ74 1663 aa40.88■■■■■ 4.13
LSM7-205ENST00000589532 UACAQ9BZF9 1416 aa40.83■■■■■ 4.13
LSM7-205ENST00000589532 PRXQ9BXM0 1461 aa40.8■■■■■ 4.12
LSM7-205ENST00000589532 TTBK1Q5TCY1 1321 aaPredicted RBP40.78■■■■■ 4.12
LSM7-205ENST00000589532 ASXL2Q76L83 1435 aa40.76■■■■■ 4.11
LSM7-205ENST00000589532 KDM5BQ9UGL1 1544 aa40.75■■■■■ 4.11
LSM7-205ENST00000589532 TSPOAP1O95153 1857 aa40.74■■■■■ 4.11
LSM7-205ENST00000589532 GLI2P10070 1586 aa40.74■■■■■ 4.11
LSM7-205ENST00000589532 PLB1Q6P1J6 1458 aa40.73■■■■■ 4.11
LSM7-205ENST00000589532 KDM6BO15054 1643 aa40.71■■■■■ 4.11
LSM7-205ENST00000589532 PPRC1Q5VV67 1664 aaKnown RBP40.69■■■■■ 4.1
LSM7-205ENST00000589532 ZCCHC11Q5TAX3 1644 aaKnown RBP40.67■■■■■ 4.1
LSM7-205ENST00000589532 AEBP2Q6ZN18 517 aaPredicted RBP40.62■■■■■ 4.09
LSM7-205ENST00000589532 GOLGA3Q08378 1498 aa40.58■■■■■ 4.09
LSM7-205ENST00000589532 EPRSP07814 1512 aaKnown RBP40.56■■■■■ 4.08
LSM7-205ENST00000589532 MAP3K4Q9Y6R4 1608 aa40.54■■■■■ 4.08
LSM7-205ENST00000589532 ABCA8O94911 1581 aa40.52■■■■■ 4.08
LSM7-205ENST00000589532 WDR7Q9Y4E6 1490 aa40.42■■■■■ 4.06
LSM7-205ENST00000589532 SAMD9Q5K651 1589 aa40.35■■■■■ 4.05
LSM7-205ENST00000589532 COL17A1Q9UMD9 1497 aaPredicted RBP40.3■■■■■ 4.04
LSM7-205ENST00000589532 CSRNP3Q8WYN3 585 aa40.29■■■■■ 4.04
LSM7-205ENST00000589532 TEX14Q8IWB6 1497 aa40.28■■■■■ 4.04
LSM7-205ENST00000589532 EEA1Q15075 1411 aa40.28■■■■■ 4.04
LSM7-205ENST00000589532 CFAP43Q8NDM7 1665 aa40.23■■■■■ 4.03
LSM7-205ENST00000589532 KDM4FA0A1W2PPD8 638 aa40.16■■■■■ 4.02
LSM7-205ENST00000589532 MAGI3Q5TCQ9 1506 aa40.15■■■■■ 4.02
LSM7-205ENST00000589532 ATP10BO94823 1461 aa40.09■■■■■ 4.01
LSM7-205ENST00000589532 RAPGEF6Q8TEU7 1601 aa40.07■■■■■ 4.01
LSM7-205ENST00000589532 CD109Q6YHK3 1445 aa40.07■■■■■ 4
LSM7-205ENST00000589532 KIF21BO75037 1637 aa40.06■■■■■ 4
LSM7-205ENST00000589532 P3H3Q8IVL6 736 aa40.06■■■■■ 4
LSM7-205ENST00000589532 ABCA9Q8IUA7 1624 aa39.96■■■■□ 3.99
LSM7-205ENST00000589532 ADGRL1O94910 1474 aa39.95■■■■□ 3.99
LSM7-205ENST00000589532 KCNH8Q96L42 1107 aa39.95■■■■□ 3.99
LSM7-205ENST00000589532 NUP153P49790 1475 aaKnown RBP39.94■■■■□ 3.98
LSM7-205ENST00000589532 FHOD3Q2V2M9 1422 aa39.92■■■■□ 3.98
LSM7-205ENST00000589532 EFCAB5A4FU69 1503 aa39.9■■■■□ 3.98
LSM7-205ENST00000589532 ARID3CA6NKF2 412 aa39.89■■■■□ 3.98
LSM7-205ENST00000589532 FAM9AQ8IZU1 332 aaPredicted RBP39.85■■■■□ 3.97
LSM7-205ENST00000589532 ARAP3Q8WWN8 1544 aa39.83■■■■□ 3.97
LSM7-205ENST00000589532 RANGAP1P46060 587 aaPredicted RBP39.7■■■■□ 3.95
LSM7-205ENST00000589532 CHIC1Q5VXU3 224 aa39.68■■■■□ 3.94
LSM7-205ENST00000589532 NEO1Q92859 1461 aa39.68■■■■□ 3.94
LSM7-205ENST00000589532 PHLDB1Q86UU1 1377 aa39.66■■■■□ 3.94
LSM7-205ENST00000589532 FRMPD1Q5SYB0 1578 aa39.63■■■■□ 3.93
LSM7-205ENST00000589532 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.57■■■■□ 3.93
LSM7-205ENST00000589532 HNRNPUL2Q1KMD3 747 aaKnown RBP39.57■■■■□ 3.93
LSM7-205ENST00000589532 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.55■■■■□ 3.927e-7■■□□□ 14.3
LSM7-205ENST00000589532 ARHGAP35Q9NRY4 1499 aa39.54■■■■□ 3.92
LSM7-205ENST00000589532 CDK13Q14004 1512 aaKnown RBP39.54■■■■□ 3.92
LSM7-205ENST00000589532 TTC37Q6PGP7 1564 aa39.54■■■■□ 3.92
LSM7-205ENST00000589532 HECW1Q76N89 1606 aa39.46■■■■□ 3.91
LSM7-205ENST00000589532 PLEKHD1A6NEE1 506 aa39.45■■■■□ 3.91
LSM7-205ENST00000589532 CFAP74Q9C0B2 1584 aa39.45■■■■□ 3.91
LSM7-205ENST00000589532 FMN1Q68DA7 1419 aa39.44■■■■□ 3.9
LSM7-205ENST00000589532 RICTORQ6R327 1708 aa39.44■■■■□ 3.9
LSM7-205ENST00000589532 RAPGEF3O95398 923 aa39.43■■■■□ 3.9
LSM7-205ENST00000589532 UBTFP17480 764 aaKnown RBP39.4■■■■□ 3.9
LSM7-205ENST00000589532 HECW2Q9P2P5 1572 aa39.4■■■■□ 3.9
LSM7-205ENST00000589532 FANCAO15360 1455 aa39.39■■■■□ 3.9
LSM7-205ENST00000589532 ARHGEF40Q8TER5 1519 aa39.38■■■■□ 3.89
LSM7-205ENST00000589532 ADAMTSL3P82987 1691 aa39.37■■■■□ 3.89
LSM7-205ENST00000589532 EHMT2Q96KQ7 1210 aa39.36■■■■□ 3.89
LSM7-205ENST00000589532 AKNAQ7Z591 1439 aa39.35■■■■□ 3.89
LSM7-205ENST00000589532 DENND4BO75064 1496 aaPredicted RBP39.33■■■■□ 3.89
LSM7-205ENST00000589532 ZMYM4Q5VZL5 1548 aa39.31■■■■□ 3.88
LSM7-205ENST00000589532 LRRIQ1Q96JM4 1722 aa39.31■■■■□ 3.88
LSM7-205ENST00000589532 BCORL1Q5H9F3 1711 aa39.28■■■■□ 3.88
LSM7-205ENST00000589532 KIF14Q15058 1648 aa39.23■■■■□ 3.87
LSM7-205ENST00000589532 PLCH2O75038 1416 aa39.23■■■■□ 3.87
LSM7-205ENST00000589532 MYO5CQ9NQX4 1742 aa39.2■■■■□ 3.87
LSM7-205ENST00000589532 MADDQ8WXG6 1647 aa39.18■■■■□ 3.86
LSM7-205ENST00000589532 PTPRMP28827 1452 aa39.17■■■■□ 3.86
LSM7-205ENST00000589532 SIGLEC1Q9BZZ2 1709 aa39.16■■■■□ 3.86
LSM7-205ENST00000589532 PCF11O94913 1555 aaKnown RBP39.16■■■■□ 3.86
LSM7-205ENST00000589532 TROQ12816 1431 aaPredicted RBP39.15■■■■□ 3.86
LSM7-205ENST00000589532 POGZQ7Z3K3 1410 aa39.14■■■■□ 3.86
LSM7-205ENST00000589532 ZFYVE16Q7Z3T8 1539 aa39.14■■■■□ 3.86
LSM7-205ENST00000589532 MAGI2Q86UL8 1455 aa39.11■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms