RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 MAPKBP1O60336 1514 aa18.33■□□□□ 0.53
CLPTM1-211ENST00000589347 DIP2BQ9P265 1576 aa18.33■□□□□ 0.52
CLPTM1-211ENST00000589347 ILDR1Q86SU0 546 aaPredicted RBP18.32■□□□□ 0.52
CLPTM1-211ENST00000589347 KDM4FA0A1W2PPD8 638 aa18.31■□□□□ 0.52
CLPTM1-211ENST00000589347 KIF27Q86VH2 1401 aa18.31■□□□□ 0.52
CLPTM1-211ENST00000589347 KDM6BO15054 1643 aa18.28■□□□□ 0.52
CLPTM1-211ENST00000589347 PRG4Q92954 1404 aaPredicted RBP18.27■□□□□ 0.52
CLPTM1-211ENST00000589347 RUSC2Q8N2Y8 1516 aa18.26■□□□□ 0.51
CLPTM1-211ENST00000589347 FAM69CQ0P6D2 419 aa18.24■□□□□ 0.51
CLPTM1-211ENST00000589347 ADCY10Q96PN6 1610 aa18.23■□□□□ 0.51
CLPTM1-211ENST00000589347 JPH4Q96JJ6 628 aa18.16■□□□□ 0.5
CLPTM1-211ENST00000589347 IGF1RP08069 1367 aa18.13■□□□□ 0.49
CLPTM1-211ENST00000589347 NPM1P06748 294 aaKnown RBP eCLIP18.11■□□□□ 0.49
CLPTM1-211ENST00000589347 TSPOAP1O95153 1857 aa18.11■□□□□ 0.49
CLPTM1-211ENST00000589347 KIAA0586Q9BVV6 1533 aa18.08■□□□□ 0.49
CLPTM1-211ENST00000589347 CARMIL1Q5VZK9 1371 aa18.08■□□□□ 0.49
CLPTM1-211ENST00000589347 ADGRL1O94910 1474 aa18.07■□□□□ 0.48
CLPTM1-211ENST00000589347 PPRC1Q5VV67 1664 aaKnown RBP18.05■□□□□ 0.48
CLPTM1-211ENST00000589347 CTTNBP2Q8WZ74 1663 aa18.05■□□□□ 0.48
CLPTM1-211ENST00000589347 IQGAP2Q13576 1575 aa18.04■□□□□ 0.48
CLPTM1-211ENST00000589347 HECW2Q9P2P5 1572 aa18.04■□□□□ 0.48
CLPTM1-211ENST00000589347 RAPGEF2Q9Y4G8 1499 aa18.01■□□□□ 0.47
CLPTM1-211ENST00000589347 GLI2P10070 1586 aa18■□□□□ 0.47
CLPTM1-211ENST00000589347 ABCC2Q92887 1545 aa17.96■□□□□ 0.47
CLPTM1-211ENST00000589347 CARMIL2Q6F5E8 1435 aa17.94■□□□□ 0.46
CLPTM1-211ENST00000589347 PLB1Q6P1J6 1458 aa17.93■□□□□ 0.46
CLPTM1-211ENST00000589347 COL17A1Q9UMD9 1497 aaPredicted RBP17.93■□□□□ 0.46
CLPTM1-211ENST00000589347 ASXL2Q76L83 1435 aa17.91■□□□□ 0.46
CLPTM1-211ENST00000589347 UGGT2Q9NYU1 1516 aa17.89■□□□□ 0.45
CLPTM1-211ENST00000589347 PTPRGP23470 1445 aa17.89■□□□□ 0.45
CLPTM1-211ENST00000589347 KIAA0556O60303 1618 aa17.88■□□□□ 0.45
CLPTM1-211ENST00000589347 MAP3K4Q9Y6R4 1608 aa17.88■□□□□ 0.45
CLPTM1-211ENST00000589347 UHRF1BP1LA0JNW5 1464 aa17.87■□□□□ 0.45
CLPTM1-211ENST00000589347 TNIKQ9UKE5 1360 aa17.86■□□□□ 0.45
CLPTM1-211ENST00000589347 EEA1Q15075 1411 aa17.86■□□□□ 0.45
CLPTM1-211ENST00000589347 PRXQ9BXM0 1461 aa17.86■□□□□ 0.45
CLPTM1-211ENST00000589347 EPRSP07814 1512 aaKnown RBP17.83■□□□□ 0.45
CLPTM1-211ENST00000589347 DISP1Q96F81 1524 aa17.82■□□□□ 0.44
CLPTM1-211ENST00000589347 TEX14Q8IWB6 1497 aa17.82■□□□□ 0.44
CLPTM1-211ENST00000589347 GOLGA3Q08378 1498 aa17.82■□□□□ 0.44
CLPTM1-211ENST00000589347 KDM5BQ9UGL1 1544 aa17.79■□□□□ 0.44
CLPTM1-211ENST00000589347 UACAQ9BZF9 1416 aa17.76■□□□□ 0.43
CLPTM1-211ENST00000589347 FBXO41Q8TF61 875 aa17.76■□□□□ 0.43
CLPTM1-211ENST00000589347 TTBK1Q5TCY1 1321 aaPredicted RBP17.74■□□□□ 0.43
CLPTM1-211ENST00000589347 KIF21BO75037 1637 aa17.73■□□□□ 0.43
CLPTM1-211ENST00000589347 ZCCHC11Q5TAX3 1644 aaKnown RBP17.73■□□□□ 0.43
CLPTM1-211ENST00000589347 CSRNP3Q8WYN3 585 aa17.72■□□□□ 0.43
CLPTM1-211ENST00000589347 SAMD9Q5K651 1589 aa17.69■□□□□ 0.42
CLPTM1-211ENST00000589347 WDR7Q9Y4E6 1490 aa17.67■□□□□ 0.42
CLPTM1-211ENST00000589347 MAGI3Q5TCQ9 1506 aa17.66■□□□□ 0.42
CLPTM1-211ENST00000589347 ABCA8O94911 1581 aa17.65■□□□□ 0.42
CLPTM1-211ENST00000589347 FAM9AQ8IZU1 332 aaPredicted RBP17.64■□□□□ 0.41
CLPTM1-211ENST00000589347 CFAP43Q8NDM7 1665 aa17.64■□□□□ 0.41
CLPTM1-211ENST00000589347 EFCAB5A4FU69 1503 aa17.59■□□□□ 0.41
CLPTM1-211ENST00000589347 CHIC1Q5VXU3 224 aa17.59■□□□□ 0.41
CLPTM1-211ENST00000589347 RAPGEF6Q8TEU7 1601 aa17.58■□□□□ 0.41
CLPTM1-211ENST00000589347 CD109Q6YHK3 1445 aa17.57■□□□□ 0.4
CLPTM1-211ENST00000589347 ADAMTSL3P82987 1691 aa17.57■□□□□ 0.4
CLPTM1-211ENST00000589347 PTPRMP28827 1452 aa17.56■□□□□ 0.4
CLPTM1-211ENST00000589347 ARAP3Q8WWN8 1544 aa17.54■□□□□ 0.4
CLPTM1-211ENST00000589347 PCF11O94913 1555 aaKnown RBP17.53■□□□□ 0.4
CLPTM1-211ENST00000589347 LMTK3Q96Q04 1460 aa17.5■□□□□ 0.39
CLPTM1-211ENST00000589347 P3H3Q8IVL6 736 aa17.48■□□□□ 0.39
CLPTM1-211ENST00000589347 FHOD3Q2V2M9 1422 aa17.47■□□□□ 0.39
CLPTM1-211ENST00000589347 BCORL1Q5H9F3 1711 aa17.46■□□□□ 0.39
CLPTM1-211ENST00000589347 RANGAP1P46060 587 aaPredicted RBP17.44■□□□□ 0.38
CLPTM1-211ENST00000589347 MADDQ8WXG6 1647 aa17.43■□□□□ 0.38
CLPTM1-211ENST00000589347 UBTFP17480 764 aaKnown RBP17.43■□□□□ 0.38
CLPTM1-211ENST00000589347 HECW1Q76N89 1606 aa17.41■□□□□ 0.38
CLPTM1-211ENST00000589347 ATP10BO94823 1461 aa17.41■□□□□ 0.38
CLPTM1-211ENST00000589347 PHLDB1Q86UU1 1377 aa17.4■□□□□ 0.38
CLPTM1-211ENST00000589347 ABCA9Q8IUA7 1624 aa17.4■□□□□ 0.38
CLPTM1-211ENST00000589347 NUP153P49790 1475 aaKnown RBP17.4■□□□□ 0.38
CLPTM1-211ENST00000589347 FRMPD1Q5SYB0 1578 aa17.4■□□□□ 0.38
CLPTM1-211ENST00000589347 KCNH8Q96L42 1107 aa17.38■□□□□ 0.37
CLPTM1-211ENST00000589347 FMN1Q68DA7 1419 aa17.37■□□□□ 0.37
CLPTM1-211ENST00000589347 EHMT2Q96KQ7 1210 aa17.36■□□□□ 0.37
CLPTM1-211ENST00000589347 ARID3CA6NKF2 412 aa17.35■□□□□ 0.37
CLPTM1-211ENST00000589347 NEO1Q92859 1461 aa17.35■□□□□ 0.37
CLPTM1-211ENST00000589347 ARHGAP35Q9NRY4 1499 aa17.35■□□□□ 0.37
CLPTM1-211ENST00000589347 ARHGEF40Q8TER5 1519 aa17.35■□□□□ 0.37
CLPTM1-211ENST00000589347 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.34■□□□□ 0.37
CLPTM1-211ENST00000589347 HNRNPUL2Q1KMD3 747 aaKnown RBP17.34■□□□□ 0.37
CLPTM1-211ENST00000589347 RIMS1Q86UR5 1692 aaKnown RBP17.32■□□□□ 0.36
CLPTM1-211ENST00000589347 CFAP74Q9C0B2 1584 aa17.32■□□□□ 0.36
CLPTM1-211ENST00000589347 RAPGEF3O95398 923 aa17.29■□□□□ 0.36
CLPTM1-211ENST00000589347 CDK13Q14004 1512 aaKnown RBP17.28■□□□□ 0.36
CLPTM1-211ENST00000589347 CERKQ8TCT0 537 aa17.28■□□□□ 0.36
CLPTM1-211ENST00000589347 LRRIQ1Q96JM4 1722 aa17.27■□□□□ 0.36
CLPTM1-211ENST00000589347 SOCS7O14512 581 aa17.27■□□□□ 0.36
CLPTM1-211ENST00000589347 ILDR2Q71H61 639 aa17.27■□□□□ 0.36
CLPTM1-211ENST00000589347 RICTORQ6R327 1708 aa17.25■□□□□ 0.35
CLPTM1-211ENST00000589347 MYO5CQ9NQX4 1742 aa17.25■□□□□ 0.35
CLPTM1-211ENST00000589347 TTC37Q6PGP7 1564 aa17.24■□□□□ 0.35
CLPTM1-211ENST00000589347 PLEKHD1A6NEE1 506 aa17.24■□□□□ 0.35
CLPTM1-211ENST00000589347 HSPA2P54652 639 aa17.24■□□□□ 0.35
CLPTM1-211ENST00000589347 KIF14Q15058 1648 aa17.24■□□□□ 0.35
CLPTM1-211ENST00000589347 ZMYM4Q5VZL5 1548 aa17.22■□□□□ 0.35
CLPTM1-211ENST00000589347 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.22■□□□□ 0.35
CLPTM1-211ENST00000589347 SIGLEC1Q9BZZ2 1709 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms