RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 CTTNBP2Q8WZ74 1663 aa39.74■■■■□ 3.95
RFX1-205ENST00000589239 CEP162Q5TB80 1403 aa39.73■■■■□ 3.95
RFX1-205ENST00000589239 CEP170Q5SW79 1584 aa39.72■■■■□ 3.95
RFX1-205ENST00000589239 NUP160Q12769 1436 aa39.7■■■■□ 3.95
RFX1-205ENST00000589239 KIAA0586Q9BVV6 1533 aa39.62■■■■□ 3.93
RFX1-205ENST00000589239 CLIP1P30622 1438 aa39.61■■■■□ 3.93
RFX1-205ENST00000589239 IQGAP2Q13576 1575 aa39.59■■■■□ 3.93
RFX1-205ENST00000589239 ARHGAP35Q9NRY4 1499 aa39.45■■■■□ 3.91
RFX1-205ENST00000589239 JPH4Q96JJ6 628 aa39.39■■■■□ 3.9
RFX1-205ENST00000589239 OSCARQ8IYS5 282 aa39.38■■■■□ 3.9
RFX1-205ENST00000589239 UGGT2Q9NYU1 1516 aa39.38■■■■□ 3.9
RFX1-205ENST00000589239 P3H3Q8IVL6 736 aa39.37■■■■□ 3.89
RFX1-205ENST00000589239 CLASP1Q7Z460 1538 aa39.37■■■■□ 3.89
RFX1-205ENST00000589239 EFCAB5A4FU69 1503 aa39.34■■■■□ 3.89
RFX1-205ENST00000589239 SAMD9Q5K651 1589 aa39.33■■■■□ 3.89
RFX1-205ENST00000589239 ARAP1Q96P48 1450 aa39.32■■■■□ 3.89
RFX1-205ENST00000589239 FHOD3Q2V2M9 1422 aa39.26■■■■□ 3.88
RFX1-205ENST00000589239 DISP1Q96F81 1524 aa39.26■■■■□ 3.88
RFX1-205ENST00000589239 SHROOM2Q13796 1616 aa39.22■■■■□ 3.87
RFX1-205ENST00000589239 KIAA0556O60303 1618 aa39.2■■■■□ 3.87
RFX1-205ENST00000589239 PRG4Q92954 1404 aaPredicted RBP39.2■■■■□ 3.87
RFX1-205ENST00000589239 CARMIL2Q6F5E8 1435 aa39.16■■■■□ 3.86
RFX1-205ENST00000589239 VPS8Q8N3P4 1428 aa39.14■■■■□ 3.86
RFX1-205ENST00000589239 ERCC6L2Q5T890 1561 aa39.06■■■■□ 3.84
RFX1-205ENST00000589239 TTBK1Q5TCY1 1321 aaPredicted RBP39.06■■■■□ 3.84
RFX1-205ENST00000589239 FMN1Q68DA7 1419 aa39.01■■■■□ 3.83
RFX1-205ENST00000589239 PCF11O94913 1555 aaKnown RBP38.89■■■■□ 3.82
RFX1-205ENST00000589239 PTPRGP23470 1445 aa38.87■■■■□ 3.81
RFX1-205ENST00000589239 CASKIN1Q8WXD9 1431 aa38.85■■■■□ 3.81
RFX1-205ENST00000589239 ATP1B4Q9UN42 357 aaPredicted RBP38.84■■■■□ 3.81
RFX1-205ENST00000589239 FYCO1Q9BQS8 1478 aa38.8■■■■□ 3.8
RFX1-205ENST00000589239 PLB1Q6P1J6 1458 aa38.78■■■■□ 3.8
RFX1-205ENST00000589239 ARHGEF11O15085 1522 aa38.73■■■■□ 3.79
RFX1-205ENST00000589239 APLP2Q06481 763 aa38.72■■■■□ 3.79
RFX1-205ENST00000589239 RAPGEF6Q8TEU7 1601 aa38.72■■■■□ 3.79
RFX1-205ENST00000589239 ABCA8O94911 1581 aa38.68■■■■□ 3.78
RFX1-205ENST00000589239 PPARGC1BQ86YN6 1023 aaKnown RBP38.67■■■■□ 3.78
RFX1-205ENST00000589239 HECW1Q76N89 1606 aa38.67■■■■□ 3.78
RFX1-205ENST00000589239 ARID3CA6NKF2 412 aa38.64■■■■□ 3.78
RFX1-205ENST00000589239 NUP153P49790 1475 aaKnown RBP38.64■■■■□ 3.78
RFX1-205ENST00000589239 UACAQ9BZF9 1416 aa38.63■■■■□ 3.77
RFX1-205ENST00000589239 LRRIQ1Q96JM4 1722 aa38.6■■■■□ 3.77
RFX1-205ENST00000589239 RIMBP3CA6NJZ7 1639 aa38.58■■■■□ 3.77
RFX1-205ENST00000589239 RIMBP3BA6NNM3 1639 aa38.58■■■■□ 3.77
RFX1-205ENST00000589239 RIMBP3Q9UFD9 1639 aa38.58■■■■□ 3.77
RFX1-205ENST00000589239 EPRSP07814 1512 aaKnown RBP38.58■■■■□ 3.77
RFX1-205ENST00000589239 TIAM1Q13009 1591 aa38.57■■■■□ 3.76
RFX1-205ENST00000589239 MAP3K1Q13233 1512 aa38.54■■■■□ 3.76
RFX1-205ENST00000589239 KANK4Q5T7N3 995 aaPredicted RBP38.53■■■■□ 3.76
RFX1-205ENST00000589239 CDK13Q14004 1512 aaKnown RBP38.53■■■■□ 3.76
RFX1-205ENST00000589239 CCDC18Q5T9S5 1454 aa38.52■■■■□ 3.76
RFX1-205ENST00000589239 ABCC2Q92887 1545 aa38.52■■■■□ 3.76
RFX1-205ENST00000589239 CFAP43Q8NDM7 1665 aa38.51■■■■□ 3.75
RFX1-205ENST00000589239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.46■■■■□ 3.75
RFX1-205ENST00000589239 HNRNPUL2Q1KMD3 747 aaKnown RBP38.46■■■■□ 3.75
RFX1-205ENST00000589239 UHRF1BP1LA0JNW5 1464 aa38.46■■■■□ 3.75
RFX1-205ENST00000589239 ATP10BO94823 1461 aa38.43■■■■□ 3.74
RFX1-205ENST00000589239 LRRC9Q6ZRR7 1453 aa38.41■■■■□ 3.74
RFX1-205ENST00000589239 ADCY10Q96PN6 1610 aa38.41■■■■□ 3.74
RFX1-205ENST00000589239 CYB5RLQ6IPT4 315 aa38.41■■■■□ 3.74
RFX1-205ENST00000589239 MAGI3Q5TCQ9 1506 aa38.34■■■■□ 3.73
RFX1-205ENST00000589239 MTUS2Q5JR59 1369 aa38.33■■■■□ 3.73
RFX1-205ENST00000589239 KDM5BQ9UGL1 1544 aa38.31■■■■□ 3.72
RFX1-205ENST00000589239 CDK11AQ9UQ88 783 aaPredicted RBP38.29■■■■□ 3.72
RFX1-205ENST00000589239 ZCCHC11Q5TAX3 1644 aaKnown RBP38.26■■■■□ 3.72
RFX1-205ENST00000589239 EHBP1L1Q8N3D4 1523 aa38.24■■■■□ 3.71
RFX1-205ENST00000589239 PLEKHD1A6NEE1 506 aa38.21■■■■□ 3.71
RFX1-205ENST00000589239 TROQ12816 1431 aaPredicted RBP38.17■■■■□ 3.7
RFX1-205ENST00000589239 DNAJC5Q9H3Z4 198 aa38.15■■■■□ 3.7
RFX1-205ENST00000589239 NPM1P06748 294 aaKnown RBP eCLIP38.15■■■■□ 3.7
RFX1-205ENST00000589239 NCOA2Q15596 1464 aa38.09■■■■□ 3.69
RFX1-205ENST00000589239 SUPT6HQ7KZ85 1726 aaKnown RBP38.09■■■■□ 3.69
RFX1-205ENST00000589239 PHLDB1Q86UU1 1377 aa38.05■■■■□ 3.68
RFX1-205ENST00000589239 KIF14Q15058 1648 aa38.03■■■■□ 3.68
RFX1-205ENST00000589239 ASXL2Q76L83 1435 aa38.01■■■■□ 3.68
RFX1-205ENST00000589239 KCNH8Q96L42 1107 aa37.99■■■■□ 3.67
RFX1-205ENST00000589239 WDR7Q9Y4E6 1490 aa37.99■■■■□ 3.67
RFX1-205ENST00000589239 TRIM26Q12899 539 aaPredicted RBP37.97■■■■□ 3.67
RFX1-205ENST00000589239 ABCC10Q5T3U5 1492 aa37.88■■■■□ 3.65
RFX1-205ENST00000589239 MYOM3Q5VTT5 1437 aa37.87■■■■□ 3.65
RFX1-205ENST00000589239 MAPKBP1O60336 1514 aa37.87■■■■□ 3.65
RFX1-205ENST00000589239 CCNB3Q8WWL7 1395 aa37.87■■■■□ 3.65
RFX1-205ENST00000589239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.84■■■■□ 3.65
RFX1-205ENST00000589239 RRBP1Q9P2E9 1410 aaKnown RBP37.83■■■■□ 3.65
RFX1-205ENST00000589239 TTC37Q6PGP7 1564 aa37.81■■■■□ 3.64
RFX1-205ENST00000589239 PCGF6Q9BYE7 350 aa37.8■■■■□ 3.64
RFX1-205ENST00000589239 FGD6Q6ZV73 1430 aa37.8■■■■□ 3.64
RFX1-205ENST00000589239 GPATCH8Q9UKJ3 1502 aaKnown RBP37.8■■■■□ 3.64
RFX1-205ENST00000589239 CDC42BPAQ5VT25 1732 aa37.72■■■■□ 3.63
RFX1-205ENST00000589239 MIA2Q96PC5 1412 aa37.71■■■■□ 3.63
RFX1-205ENST00000589239 CFDP1Q9UEE9 299 aaPredicted RBP37.7■■■■□ 3.63
RFX1-205ENST00000589239 ITSN2Q9NZM3 1697 aa37.7■■■■□ 3.63
RFX1-205ENST00000589239 FAM50AQ14320 339 aaKnown RBP37.69■■■■□ 3.62
RFX1-205ENST00000589239 ABCA9Q8IUA7 1624 aa37.67■■■■□ 3.62
RFX1-205ENST00000589239 PTPN23Q9H3S7 1636 aa37.65■■■■□ 3.62
RFX1-205ENST00000589239 PREX2Q70Z35 1606 aa37.63■■■■□ 3.62
RFX1-205ENST00000589239 MYO5CQ9NQX4 1742 aa37.62■■■■□ 3.61
RFX1-205ENST00000589239 ZNF777Q9ULD5 760 aaPredicted RBP37.62■■■■□ 3.61
RFX1-205ENST00000589239 ZNF644Q9H582 1327 aaPredicted RBP37.61■■■■□ 3.61
RFX1-205ENST00000589239 CDC42BPBQ9Y5S2 1711 aa37.61■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 236.4 ms