RNA–Protein interactions for RNA: ENST00000589228.5

PRKAR1A-217, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 4,256 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-217ENST00000589228 BCL11AQ9H165 835 aa16.45■□□□□ 0.22
PRKAR1A-217ENST00000589228 CCNB3Q8WWL7 1395 aa16.44■□□□□ 0.22
PRKAR1A-217ENST00000589228 VPS8Q8N3P4 1428 aa16.43■□□□□ 0.22
PRKAR1A-217ENST00000589228 RUSC2Q8N2Y8 1516 aa16.41■□□□□ 0.22
PRKAR1A-217ENST00000589228 TSPY4P0CV99 314 aa16.4■□□□□ 0.22
PRKAR1A-217ENST00000589228 TSPY10P0CW01 314 aa16.4■□□□□ 0.22
PRKAR1A-217ENST00000589228 ANP32AP39687 249 aaKnown RBP16.4■□□□□ 0.22
PRKAR1A-217ENST00000589228 CANXP27824 592 aaKnown RBP16.39■□□□□ 0.22
PRKAR1A-217ENST00000589228 CHMP7Q8WUX9 453 aaPredicted RBP16.39■□□□□ 0.22
PRKAR1A-217ENST00000589228 CCDC136Q96JN2 1154 aa16.39■□□□□ 0.21
PRKAR1A-217ENST00000589228 SUPT16HQ9Y5B9 1047 aaKnown RBP16.38■□□□□ 0.21
PRKAR1A-217ENST00000589228 CHGAP10645 457 aaKnown RBP16.38■□□□□ 0.21
PRKAR1A-217ENST00000589228 CARMIL1Q5VZK9 1371 aa16.36■□□□□ 0.21
PRKAR1A-217ENST00000589228 CUX2O14529 1486 aa16.36■□□□□ 0.21
PRKAR1A-217ENST00000589228 RGL3Q3MIN7 710 aa16.33■□□□□ 0.21
PRKAR1A-217ENST00000589228 NBR1Q14596 966 aa16.3■□□□□ 0.2
PRKAR1A-217ENST00000589228 CFDP1Q9UEE9 299 aaPredicted RBP16.28■□□□□ 0.2
PRKAR1A-217ENST00000589228 RAPGEF2Q9Y4G8 1499 aa16.27■□□□□ 0.2
PRKAR1A-217ENST00000589228 KCNH8Q96L42 1107 aa16.27■□□□□ 0.2
PRKAR1A-217ENST00000589228 TOP2AP11388 1531 aaKnown RBP16.26■□□□□ 0.19
PRKAR1A-217ENST00000589228 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
PRKAR1A-217ENST00000589228 RAB3GAP2Q9H2M9 1393 aa16.25■□□□□ 0.19
PRKAR1A-217ENST00000589228 FOXD1Q16676 465 aa16.25■□□□□ 0.19
PRKAR1A-217ENST00000589228 PLEKHD1A6NEE1 506 aa16.24■□□□□ 0.19
PRKAR1A-217ENST00000589228 SETD5Q9C0A6 1442 aa16.22■□□□□ 0.19
PRKAR1A-217ENST00000589228 FHAD1B1AJZ9 1412 aa16.21■□□□□ 0.19
PRKAR1A-217ENST00000589228 CARD11Q9BXL7 1154 aa16.19■□□□□ 0.18
PRKAR1A-217ENST00000589228 SLC24A1O60721 1099 aa16.17■□□□□ 0.18
PRKAR1A-217ENST00000589228 ZBTB47Q9UFB7 747 aaPredicted RBP16.17■□□□□ 0.18
PRKAR1A-217ENST00000589228 WDR43Q15061 677 aaKnown RBP eCLIP16.17■□□□□ 0.18
PRKAR1A-217ENST00000589228 TDRD9Q8NDG6 1382 aaKnown RBP16.17■□□□□ 0.18
PRKAR1A-217ENST00000589228 B4GALNT3Q6L9W6 998 aa16.15■□□□□ 0.18
PRKAR1A-217ENST00000589228 NEFMP07197 916 aa16.14■□□□□ 0.17
PRKAR1A-217ENST00000589228 HSPA5P11021 654 aaKnown RBP16.14■□□□□ 0.17
PRKAR1A-217ENST00000589228 PPP1R15AO75807 674 aaPredicted RBP16.13■□□□□ 0.17
PRKAR1A-217ENST00000589228 DHX57Q6P158 1386 aaKnown RBP16.13■□□□□ 0.17
PRKAR1A-217ENST00000589228 TIMELESSQ9UNS1 1208 aa16.12■□□□□ 0.17
PRKAR1A-217ENST00000589228 ATAD2BQ9ULI0 1458 aa16.12■□□□□ 0.17
PRKAR1A-217ENST00000589228 ANP32EQ9BTT0 268 aa16.11■□□□□ 0.17
PRKAR1A-217ENST00000589228 SMARCA4P51532 1647 aa16.1■□□□□ 0.17
PRKAR1A-217ENST00000589228 SMARCA2P51531 1590 aa16.09■□□□□ 0.17
PRKAR1A-217ENST00000589228 EIF4G1Q04637 1599 aaKnown RBP16.09■□□□□ 0.17
PRKAR1A-217ENST00000589228 STAG3Q9UJ98 1225 aa16.08■□□□□ 0.16
PRKAR1A-217ENST00000589228 FHOD3Q2V2M9 1422 aa16.08■□□□□ 0.16
PRKAR1A-217ENST00000589228 ARHGAP35Q9NRY4 1499 aa16.08■□□□□ 0.16
PRKAR1A-217ENST00000589228 NPM1P06748 294 aaKnown RBP eCLIP16.08■□□□□ 0.16
PRKAR1A-217ENST00000589228 CCER2I3L3R5 266 aa16.06■□□□□ 0.16
PRKAR1A-217ENST00000589228 DCAF11Q8TEB1 546 aa16.06■□□□□ 0.16
PRKAR1A-217ENST00000589228 PLPPR3Q6T4P5 718 aa16.06■□□□□ 0.16
PRKAR1A-217ENST00000589228 PPP4R2Q9NY27 417 aa16.05■□□□□ 0.16
PRKAR1A-217ENST00000589228 CC2D1BQ5T0F9 858 aaKnown RBP16.03■□□□□ 0.16
PRKAR1A-217ENST00000589228 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.03■□□□□ 0.16
PRKAR1A-217ENST00000589228 MPHOSPH9Q99550 1183 aa16.03■□□□□ 0.16
PRKAR1A-217ENST00000589228 RBM19Q9Y4C8 960 aaKnown RBP16.02■□□□□ 0.16
PRKAR1A-217ENST00000589228 PKD2Q13563 968 aa16.01■□□□□ 0.15
PRKAR1A-217ENST00000589228 L3MBTL2Q969R5 705 aa16.01■□□□□ 0.15
PRKAR1A-217ENST00000589228 ARXQ96QS3 562 aa16■□□□□ 0.15
PRKAR1A-217ENST00000589228 TSHZ2Q9NRE2 1034 aa16■□□□□ 0.15
PRKAR1A-217ENST00000589228 CADPSQ9ULU8 1353 aa15.99■□□□□ 0.15
PRKAR1A-217ENST00000589228 NEUROD2Q15784 382 aa15.99■□□□□ 0.15
PRKAR1A-217ENST00000589228 KNSTRNQ9Y448 316 aa15.99■□□□□ 0.15
PRKAR1A-217ENST00000589228 UPF2Q9HAU5 1272 aaKnown RBP15.97■□□□□ 0.15
PRKAR1A-217ENST00000589228 ESF1Q9H501 851 aaKnown RBP15.96■□□□□ 0.14
PRKAR1A-217ENST00000589228 TNNT2P45379 298 aaPredicted RBP15.94■□□□□ 0.14
PRKAR1A-217ENST00000589228 FMN1Q68DA7 1419 aa15.94■□□□□ 0.14
PRKAR1A-217ENST00000589228 HSP90AA1P07900 732 aaKnown RBP15.94■□□□□ 0.14
PRKAR1A-217ENST00000589228 EIF5BO60841 1220 aaKnown RBP15.93■□□□□ 0.14
PRKAR1A-217ENST00000589228 RGS3P49796 1198 aa15.9■□□□□ 0.14
PRKAR1A-217ENST00000589228 IGF1RP08069 1367 aa15.9■□□□□ 0.14
PRKAR1A-217ENST00000589228 LAS1LQ9Y4W2 734 aaKnown RBP15.9■□□□□ 0.14
PRKAR1A-217ENST00000589228 ERCC6Q03468 1493 aa15.87■□□□□ 0.13
PRKAR1A-217ENST00000589228 NUP155O75694 1391 aa15.86■□□□□ 0.13
PRKAR1A-217ENST00000589228 PPM1GO15355 546 aaPredicted RBP15.85■□□□□ 0.13
PRKAR1A-217ENST00000589228 KIF21BO75037 1637 aa15.84■□□□□ 0.13
PRKAR1A-217ENST00000589228 CDCA8Q53HL2 280 aa15.84■□□□□ 0.13
PRKAR1A-217ENST00000589228 FRAT1Q92837 279 aaPredicted RBP15.84■□□□□ 0.13
PRKAR1A-217ENST00000589228 NOP58Q9Y2X3 529 aaKnown RBP15.83■□□□□ 0.12
PRKAR1A-217ENST00000589228 PHLDB1Q86UU1 1377 aa15.82■□□□□ 0.12
PRKAR1A-217ENST00000589228 TMF1P82094 1093 aa15.82■□□□□ 0.12
PRKAR1A-217ENST00000589228 HNRNPMP52272 730 aaKnown RBP eCLIP15.82■□□□□ 0.122e-6■■□□□ 11.9
PRKAR1A-217ENST00000589228 PDS5BQ9NTI5 1447 aa15.82■□□□□ 0.12
PRKAR1A-217ENST00000589228 PLEKHG5O94827 1062 aa15.8■□□□□ 0.12
PRKAR1A-217ENST00000589228 ARAP1Q96P48 1450 aa15.79■□□□□ 0.12
PRKAR1A-217ENST00000589228 RAD54L2Q9Y4B4 1467 aa15.77■□□□□ 0.12
PRKAR1A-217ENST00000589228 FANCD2Q9BXW9 1451 aa15.77■□□□□ 0.11
PRKAR1A-217ENST00000589228 SAFB2Q14151 953 aaKnown RBP eCLIP15.77■□□□□ 0.11
PRKAR1A-217ENST00000589228 CFAP53Q96M91 514 aa15.77■□□□□ 0.11
PRKAR1A-217ENST00000589228 PRKRIP1Q9H875 184 aaPredicted RBP15.76■□□□□ 0.11
PRKAR1A-217ENST00000589228 SYNJ1O43426 1573 aa15.76■□□□□ 0.11
PRKAR1A-217ENST00000589228 FGD5Q6ZNL6 1462 aa15.75■□□□□ 0.11
PRKAR1A-217ENST00000589228 ST20-MTHFSA0A0A6YYL1 179 aa15.75■□□□□ 0.11
PRKAR1A-217ENST00000589228 DDRGK1Q96HY6 314 aa15.75■□□□□ 0.11
PRKAR1A-217ENST00000589228 ZNF644Q9H582 1327 aaPredicted RBP15.74■□□□□ 0.11
PRKAR1A-217ENST00000589228 ROCK2O75116 1388 aaKnown RBP15.74■□□□□ 0.11
PRKAR1A-217ENST00000589228 RCAN3Q9UKA8 241 aa15.74■□□□□ 0.11
PRKAR1A-217ENST00000589228 RTN4Q9NQC3 1192 aaKnown RBP15.74■□□□□ 0.11
PRKAR1A-217ENST00000589228 CCDC18Q5T9S5 1454 aa15.73■□□□□ 0.11
PRKAR1A-217ENST00000589228 ANKRD30AQ9BXX3 1397 aa15.73■□□□□ 0.11
PRKAR1A-217ENST00000589228 U2SURPO15042 1029 aaKnown RBP15.73■□□□□ 0.11
PRKAR1A-217ENST00000589228 JPH4Q96JJ6 628 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms