RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 SHROOM2Q13796 1616 aa35.35■■■■□ 3.25
MBD3-205ENST00000589064 CUL7Q14999 1698 aa35.34■■■■□ 3.25
MBD3-205ENST00000589064 RUSC2Q8N2Y8 1516 aa35.3■■■■□ 3.24
MBD3-205ENST00000589064 KIAA0586Q9BVV6 1533 aa35.28■■■■□ 3.24
MBD3-205ENST00000589064 RAPGEF2Q9Y4G8 1499 aa35.1■■■■□ 3.21
MBD3-205ENST00000589064 TTBK1Q5TCY1 1321 aaPredicted RBP34.97■■■■□ 3.19
MBD3-205ENST00000589064 CARMIL2Q6F5E8 1435 aa34.93■■■■□ 3.18
MBD3-205ENST00000589064 IQGAP2Q13576 1575 aa34.92■■■■□ 3.18
MBD3-205ENST00000589064 PTPRGP23470 1445 aa34.91■■■■□ 3.18
MBD3-205ENST00000589064 NPM1P06748 294 aaKnown RBP eCLIP34.9■■■■□ 3.18
MBD3-205ENST00000589064 CSRNP3Q8WYN3 585 aa34.89■■■■□ 3.18
MBD3-205ENST00000589064 PRXQ9BXM0 1461 aa34.88■■■■□ 3.17
MBD3-205ENST00000589064 TNIKQ9UKE5 1360 aa34.87■■■■□ 3.17
MBD3-205ENST00000589064 DISP1Q96F81 1524 aa34.79■■■■□ 3.16
MBD3-205ENST00000589064 CHIC1Q5VXU3 224 aa34.77■■■■□ 3.16
MBD3-205ENST00000589064 FAM9AQ8IZU1 332 aaPredicted RBP34.77■■■■□ 3.16
MBD3-205ENST00000589064 UGGT2Q9NYU1 1516 aa34.76■■■■□ 3.16
MBD3-205ENST00000589064 ADCY10Q96PN6 1610 aa34.75■■■■□ 3.15
MBD3-205ENST00000589064 EEA1Q15075 1411 aa34.69■■■■□ 3.14
MBD3-205ENST00000589064 FAM69CQ0P6D2 419 aa34.65■■■■□ 3.14
MBD3-205ENST00000589064 UACAQ9BZF9 1416 aa34.63■■■■□ 3.13
MBD3-205ENST00000589064 KIAA0556O60303 1618 aa34.6■■■■□ 3.13
MBD3-205ENST00000589064 MAPKBP1O60336 1514 aa34.6■■■■□ 3.13
MBD3-205ENST00000589064 ABCC10Q5T3U5 1492 aa34.57■■■■□ 3.13
MBD3-205ENST00000589064 CTTNBP2Q8WZ74 1663 aa34.57■■■■□ 3.12
MBD3-205ENST00000589064 ABCC2Q92887 1545 aa34.56■■■■□ 3.12
MBD3-205ENST00000589064 UHRF1BP1LA0JNW5 1464 aa34.55■■■■□ 3.12
MBD3-205ENST00000589064 GOLGA3Q08378 1498 aa34.55■■■■□ 3.12
MBD3-205ENST00000589064 P3H3Q8IVL6 736 aa34.51■■■■□ 3.11
MBD3-205ENST00000589064 KIF13AQ9H1H9 1805 aa34.45■■■■□ 3.1
MBD3-205ENST00000589064 RANGAP1P46060 587 aaPredicted RBP34.43■■■■□ 3.1
MBD3-205ENST00000589064 ASXL2Q76L83 1435 aa34.42■■■■□ 3.1
MBD3-205ENST00000589064 PLB1Q6P1J6 1458 aa34.42■■■■□ 3.1
MBD3-205ENST00000589064 DIP2BQ9P265 1576 aa34.41■■■■□ 3.1
MBD3-205ENST00000589064 KDM5BQ9UGL1 1544 aa34.39■■■■□ 3.1
MBD3-205ENST00000589064 EHMT2Q96KQ7 1210 aa34.39■■■■□ 3.1
MBD3-205ENST00000589064 KIF21BO75037 1637 aa34.28■■■■□ 3.08
MBD3-205ENST00000589064 ABCA8O94911 1581 aa34.27■■■■□ 3.08
MBD3-205ENST00000589064 UBTFP17480 764 aaKnown RBP34.27■■■■□ 3.08
MBD3-205ENST00000589064 ZCCHC11Q5TAX3 1644 aaKnown RBP34.24■■■■□ 3.07
MBD3-205ENST00000589064 ARID3CA6NKF2 412 aa34.23■■■■□ 3.07
MBD3-205ENST00000589064 SAMD9Q5K651 1589 aa34.2■■■■□ 3.07
MBD3-205ENST00000589064 EPRSP07814 1512 aaKnown RBP34.2■■■■□ 3.07
MBD3-205ENST00000589064 GLI2P10070 1586 aa34.16■■■■□ 3.06
MBD3-205ENST00000589064 KCNH8Q96L42 1107 aa34.16■■■■□ 3.06
MBD3-205ENST00000589064 FHOD3Q2V2M9 1422 aa34.15■■■■□ 3.06
MBD3-205ENST00000589064 WDR7Q9Y4E6 1490 aa34.14■■■■□ 3.06
MBD3-205ENST00000589064 TSPOAP1O95153 1857 aa34.1■■■■□ 3.05
MBD3-205ENST00000589064 ATP10BO94823 1461 aa34.09■■■■□ 3.05
MBD3-205ENST00000589064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.05■■■■□ 3.04
MBD3-205ENST00000589064 HNRNPUL2Q1KMD3 747 aaKnown RBP34.05■■■■□ 3.04
MBD3-205ENST00000589064 EFCAB5A4FU69 1503 aa34■■■■□ 3.03
MBD3-205ENST00000589064 RAPGEF6Q8TEU7 1601 aa33.98■■■■□ 3.03
MBD3-205ENST00000589064 KDM6BO15054 1643 aa33.97■■■■□ 3.03
MBD3-205ENST00000589064 NUP153P49790 1475 aaKnown RBP33.95■■■■□ 3.02
MBD3-205ENST00000589064 PPRC1Q5VV67 1664 aaKnown RBP33.95■■■■□ 3.02
MBD3-205ENST00000589064 CD109Q6YHK3 1445 aa33.95■■■■□ 3.02
MBD3-205ENST00000589064 MAP3K4Q9Y6R4 1608 aa33.95■■■■□ 3.02
MBD3-205ENST00000589064 TEX14Q8IWB6 1497 aa33.9■■■■□ 3.02
MBD3-205ENST00000589064 ARHGAP35Q9NRY4 1499 aa33.88■■■■□ 3.01
MBD3-205ENST00000589064 COL17A1Q9UMD9 1497 aaPredicted RBP33.86■■■■□ 3.01
MBD3-205ENST00000589064 AEBP2Q6ZN18 517 aaPredicted RBP33.86■■■■□ 3.01
MBD3-205ENST00000589064 PLEKHD1A6NEE1 506 aa33.85■■■■□ 3.01
MBD3-205ENST00000589064 ATP1B4Q9UN42 357 aaPredicted RBP33.84■■■■□ 3.01
MBD3-205ENST00000589064 MAGI3Q5TCQ9 1506 aa33.82■■■■□ 3
MBD3-205ENST00000589064 FMN1Q68DA7 1419 aa33.78■■■■□ 3
MBD3-205ENST00000589064 CFAP43Q8NDM7 1665 aa33.76■■■■□ 3
MBD3-205ENST00000589064 CDK13Q14004 1512 aaKnown RBP33.67■■■□□ 2.98
MBD3-205ENST00000589064 ABCA9Q8IUA7 1624 aa33.65■■■□□ 2.98
MBD3-205ENST00000589064 KDM4FA0A1W2PPD8 638 aa33.6■■■□□ 2.97
MBD3-205ENST00000589064 CDK11AQ9UQ88 783 aaPredicted RBP33.58■■■□□ 2.97
MBD3-205ENST00000589064 CLIP1P30622 1438 aa33.57■■■□□ 2.97
MBD3-205ENST00000589064 PHLDB1Q86UU1 1377 aa33.57■■■□□ 2.96
MBD3-205ENST00000589064 HECW1Q76N89 1606 aa33.56■■■□□ 2.96
MBD3-205ENST00000589064 ARAP3Q8WWN8 1544 aa33.53■■■□□ 2.96
MBD3-205ENST00000589064 RAPGEF3O95398 923 aa33.51■■■□□ 2.96
MBD3-205ENST00000589064 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.5■■■□□ 2.957e-8■□□□□ 9
MBD3-205ENST00000589064 NEO1Q92859 1461 aa33.5■■■□□ 2.95
MBD3-205ENST00000589064 CASKIN1Q8WXD9 1431 aa33.48■■■□□ 2.95
MBD3-205ENST00000589064 LOC105371045A0A1W2PR82 267 aa33.42■■■□□ 2.94
MBD3-205ENST00000589064 TROQ12816 1431 aaPredicted RBP33.4■■■□□ 2.94
MBD3-205ENST00000589064 AKNAQ7Z591 1439 aa33.4■■■□□ 2.94
MBD3-205ENST00000589064 TTC37Q6PGP7 1564 aa33.4■■■□□ 2.94
MBD3-205ENST00000589064 FANCAO15360 1455 aa33.39■■■□□ 2.94
MBD3-205ENST00000589064 PCF11O94913 1555 aaKnown RBP33.38■■■□□ 2.93
MBD3-205ENST00000589064 PLCH2O75038 1416 aa33.37■■■□□ 2.93
MBD3-205ENST00000589064 ADGRL1O94910 1474 aa33.33■■■□□ 2.93
MBD3-205ENST00000589064 CCDC18Q5T9S5 1454 aa33.33■■■□□ 2.93
MBD3-205ENST00000589064 DENND4BO75064 1496 aaPredicted RBP33.32■■■□□ 2.92
MBD3-205ENST00000589064 FYCO1Q9BQS8 1478 aa33.32■■■□□ 2.92
MBD3-205ENST00000589064 EFCAB2Q5VUJ9 269 aa33.31■■■□□ 2.92
MBD3-205ENST00000589064 CEP162Q5TB80 1403 aa33.31■■■□□ 2.92
MBD3-205ENST00000589064 LRRIQ1Q96JM4 1722 aa33.3■■■□□ 2.92
MBD3-205ENST00000589064 KIF14Q15058 1648 aa33.27■■■□□ 2.92
MBD3-205ENST00000589064 SCAPERQ9BY12 1400 aa33.23■■■□□ 2.91
MBD3-205ENST00000589064 FRMPD1Q5SYB0 1578 aa33.22■■■□□ 2.91
MBD3-205ENST00000589064 CFAP74Q9C0B2 1584 aa33.22■■■□□ 2.91
MBD3-205ENST00000589064 ARID4BQ4LE39 1312 aaPredicted RBP33.14■■■□□ 2.9
MBD3-205ENST00000589064 ARHGAP5Q13017 1502 aa33.14■■■□□ 2.9
MBD3-205ENST00000589064 MYO5CQ9NQX4 1742 aa33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms