RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 KIAA0586Q9BVV6 1533 aa31.34■■■□□ 2.61
CLPTM1-209ENST00000588855 SHROOM2Q13796 1616 aa31.31■■■□□ 2.6
CLPTM1-209ENST00000588855 IQGAP2Q13576 1575 aa31.28■■■□□ 2.6
CLPTM1-209ENST00000588855 ARHGEF11O15085 1522 aa31.25■■■□□ 2.59
CLPTM1-209ENST00000588855 RIMBP3CA6NJZ7 1639 aa31.24■■■□□ 2.59
CLPTM1-209ENST00000588855 RIMBP3BA6NNM3 1639 aa31.24■■■□□ 2.59
CLPTM1-209ENST00000588855 RIMBP3Q9UFD9 1639 aa31.24■■■□□ 2.59
CLPTM1-209ENST00000588855 GOLGA3Q08378 1498 aa31.24■■■□□ 2.59
CLPTM1-209ENST00000588855 EHMT2Q96KQ7 1210 aa31.21■■■□□ 2.59
CLPTM1-209ENST00000588855 JPH4Q96JJ6 628 aa31.19■■■□□ 2.58
CLPTM1-209ENST00000588855 ERCC6L2Q5T890 1561 aa31.18■■■□□ 2.58
CLPTM1-209ENST00000588855 PRG4Q92954 1404 aaPredicted RBP31.13■■■□□ 2.57
CLPTM1-209ENST00000588855 UGGT2Q9NYU1 1516 aa31.09■■■□□ 2.57
CLPTM1-209ENST00000588855 UBTFP17480 764 aaKnown RBP31.07■■■□□ 2.56
CLPTM1-209ENST00000588855 ARAP1Q96P48 1450 aa31.04■■■□□ 2.56
CLPTM1-209ENST00000588855 DISP1Q96F81 1524 aa31.01■■■□□ 2.55
CLPTM1-209ENST00000588855 KIAA0556O60303 1618 aa30.99■■■□□ 2.55
CLPTM1-209ENST00000588855 CARMIL2Q6F5E8 1435 aa30.97■■■□□ 2.55
CLPTM1-209ENST00000588855 SAMD9Q5K651 1589 aa30.92■■■□□ 2.54
CLPTM1-209ENST00000588855 RANGAP1P46060 587 aaPredicted RBP30.9■■■□□ 2.54
CLPTM1-209ENST00000588855 TNIKQ9UKE5 1360 aa30.87■■■□□ 2.53
CLPTM1-209ENST00000588855 CYB5RLQ6IPT4 315 aa30.87■■■□□ 2.53
CLPTM1-209ENST00000588855 LOC105371045A0A1W2PR82 267 aa30.86■■■□□ 2.53
CLPTM1-209ENST00000588855 EFCAB5A4FU69 1503 aa30.83■■■□□ 2.53
CLPTM1-209ENST00000588855 PTPRGP23470 1445 aa30.79■■■□□ 2.52
CLPTM1-209ENST00000588855 P3H3Q8IVL6 736 aa30.78■■■□□ 2.52
CLPTM1-209ENST00000588855 TTBK1Q5TCY1 1321 aaPredicted RBP30.78■■■□□ 2.52
CLPTM1-209ENST00000588855 ARHGAP35Q9NRY4 1499 aa30.74■■■□□ 2.51
CLPTM1-209ENST00000588855 FHOD3Q2V2M9 1422 aa30.74■■■□□ 2.51
CLPTM1-209ENST00000588855 CLIP1P30622 1438 aa30.67■■■□□ 2.5
CLPTM1-209ENST00000588855 ADCY10Q96PN6 1610 aa30.67■■■□□ 2.5
CLPTM1-209ENST00000588855 CEP162Q5TB80 1403 aa30.66■■■□□ 2.5
CLPTM1-209ENST00000588855 PLB1Q6P1J6 1458 aa30.61■■■□□ 2.49
CLPTM1-209ENST00000588855 UACAQ9BZF9 1416 aa30.61■■■□□ 2.49
CLPTM1-209ENST00000588855 ABCA8O94911 1581 aa30.61■■■□□ 2.49
CLPTM1-209ENST00000588855 ABCC2Q92887 1545 aa30.59■■■□□ 2.49
CLPTM1-209ENST00000588855 UHRF1BP1LA0JNW5 1464 aa30.57■■■□□ 2.48
CLPTM1-209ENST00000588855 RAPGEF6Q8TEU7 1601 aa30.54■■■□□ 2.48
CLPTM1-209ENST00000588855 FMN1Q68DA7 1419 aa30.5■■■□□ 2.47
CLPTM1-209ENST00000588855 ZCCHC11Q5TAX3 1644 aaKnown RBP30.44■■■□□ 2.46
CLPTM1-209ENST00000588855 KDM5BQ9UGL1 1544 aa30.43■■■□□ 2.46
CLPTM1-209ENST00000588855 NUP153P49790 1475 aaKnown RBP30.4■■■□□ 2.46
CLPTM1-209ENST00000588855 PCF11O94913 1555 aaKnown RBP30.4■■■□□ 2.46
CLPTM1-209ENST00000588855 NPM1P06748 294 aaKnown RBP eCLIP30.39■■■□□ 2.46
CLPTM1-209ENST00000588855 HECW1Q76N89 1606 aa30.37■■■□□ 2.45
CLPTM1-209ENST00000588855 MAPKBP1O60336 1514 aa30.36■■■□□ 2.45
CLPTM1-209ENST00000588855 ARID3CA6NKF2 412 aa30.34■■■□□ 2.45
CLPTM1-209ENST00000588855 ATP10BO94823 1461 aa30.32■■■□□ 2.44
CLPTM1-209ENST00000588855 CASKIN1Q8WXD9 1431 aa30.32■■■□□ 2.44
CLPTM1-209ENST00000588855 LRRIQ1Q96JM4 1722 aa30.31■■■□□ 2.44
CLPTM1-209ENST00000588855 FYCO1Q9BQS8 1478 aa30.3■■■□□ 2.44
CLPTM1-209ENST00000588855 ATP1B4Q9UN42 357 aaPredicted RBP30.27■■■□□ 2.44
CLPTM1-209ENST00000588855 CDK13Q14004 1512 aaKnown RBP30.27■■■□□ 2.44
CLPTM1-209ENST00000588855 ASXL2Q76L83 1435 aa30.26■■■□□ 2.43
CLPTM1-209ENST00000588855 EPRSP07814 1512 aaKnown RBP30.25■■■□□ 2.43
CLPTM1-209ENST00000588855 VPS8Q8N3P4 1428 aa30.24■■■□□ 2.43
CLPTM1-209ENST00000588855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.19■■■□□ 2.42
CLPTM1-209ENST00000588855 HNRNPUL2Q1KMD3 747 aaKnown RBP30.19■■■□□ 2.42
CLPTM1-209ENST00000588855 WDR7Q9Y4E6 1490 aa30.18■■■□□ 2.42
CLPTM1-209ENST00000588855 KIF13AQ9H1H9 1805 aa30.17■■■□□ 2.42
CLPTM1-209ENST00000588855 DIP2BQ9P265 1576 aa30.17■■■□□ 2.42
CLPTM1-209ENST00000588855 CCDC18Q5T9S5 1454 aa30.17■■■□□ 2.42
CLPTM1-209ENST00000588855 ABCC10Q5T3U5 1492 aa30.14■■■□□ 2.42
CLPTM1-209ENST00000588855 TRHP20396 242 aaPredicted RBP30.11■■■□□ 2.41
CLPTM1-209ENST00000588855 CFAP43Q8NDM7 1665 aa30.05■■■□□ 2.4
CLPTM1-209ENST00000588855 PLEKHD1A6NEE1 506 aa30.03■■■□□ 2.4
CLPTM1-209ENST00000588855 GLI2P10070 1586 aa30.03■■■□□ 2.4
CLPTM1-209ENST00000588855 FAM69CQ0P6D2 419 aa30.02■■■□□ 2.4
CLPTM1-209ENST00000588855 MAGI3Q5TCQ9 1506 aa30.02■■■□□ 2.4
CLPTM1-209ENST00000588855 KCNH8Q96L42 1107 aa30.01■■■□□ 2.4
CLPTM1-209ENST00000588855 CDK11AQ9UQ88 783 aaPredicted RBP30■■■□□ 2.39
CLPTM1-209ENST00000588855 TIAM1Q13009 1591 aa29.99■■■□□ 2.39
CLPTM1-209ENST00000588855 TROQ12816 1431 aaPredicted RBP29.97■■■□□ 2.39
CLPTM1-209ENST00000588855 MAP3K4Q9Y6R4 1608 aa29.96■■■□□ 2.39
CLPTM1-209ENST00000588855 KIF14Q15058 1648 aa29.95■■■□□ 2.38
CLPTM1-209ENST00000588855 ABCA9Q8IUA7 1624 aa29.94■■■□□ 2.38
CLPTM1-209ENST00000588855 TSPOAP1O95153 1857 aa29.93■■■□□ 2.38
CLPTM1-209ENST00000588855 MAP3K1Q13233 1512 aa29.91■■■□□ 2.38
CLPTM1-209ENST00000588855 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.9■■■□□ 2.38
CLPTM1-209ENST00000588855 TTC37Q6PGP7 1564 aa29.89■■■□□ 2.38
CLPTM1-209ENST00000588855 EHBP1L1Q8N3D4 1523 aa29.88■■■□□ 2.37
CLPTM1-209ENST00000588855 PPRC1Q5VV67 1664 aaKnown RBP29.88■■■□□ 2.37
CLPTM1-209ENST00000588855 MTUS2Q5JR59 1369 aa29.88■■■□□ 2.37
CLPTM1-209ENST00000588855 CD109Q6YHK3 1445 aa29.83■■■□□ 2.37
CLPTM1-209ENST00000588855 LRRC9Q6ZRR7 1453 aa29.83■■■□□ 2.37
CLPTM1-209ENST00000588855 APLP2Q06481 763 aa29.81■■■□□ 2.36
CLPTM1-209ENST00000588855 MYO5CQ9NQX4 1742 aa29.78■■■□□ 2.36
CLPTM1-209ENST00000588855 KANK4Q5T7N3 995 aaPredicted RBP29.77■■■□□ 2.36
CLPTM1-209ENST00000588855 SUPT6HQ7KZ85 1726 aaKnown RBP29.76■■■□□ 2.35
CLPTM1-209ENST00000588855 CDC42BPAQ5VT25 1732 aa29.72■■■□□ 2.35
CLPTM1-209ENST00000588855 TEX14Q8IWB6 1497 aa29.72■■■□□ 2.35
CLPTM1-209ENST00000588855 PREX2Q70Z35 1606 aa29.7■■■□□ 2.34
CLPTM1-209ENST00000588855 NCOA2Q15596 1464 aa29.69■■■□□ 2.34
CLPTM1-209ENST00000588855 CDC42BPBQ9Y5S2 1711 aa29.68■■■□□ 2.34
CLPTM1-209ENST00000588855 PLCH2O75038 1416 aa29.68■■■□□ 2.34
CLPTM1-209ENST00000588855 ARAP3Q8WWN8 1544 aa29.65■■■□□ 2.34
CLPTM1-209ENST00000588855 CFAP74Q9C0B2 1584 aa29.63■■■□□ 2.33
CLPTM1-209ENST00000588855 ARHGAP5Q13017 1502 aa29.62■■■□□ 2.33
CLPTM1-209ENST00000588855 GPATCH8Q9UKJ3 1502 aaKnown RBP29.62■■■□□ 2.33
CLPTM1-209ENST00000588855 FANCAO15360 1455 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms