RNA–Protein interactions for RNA: ENST00000588831.5

LRFN3-204, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRFN3, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-204ENST00000588831 SYNJ1O43426 1573 aa17.13■□□□□ 0.33
LRFN3-204ENST00000588831 CDK11AQ9UQ88 783 aaPredicted RBP17.09■□□□□ 0.33
LRFN3-204ENST00000588831 POLR3GLQ9BT43 218 aa17.06■□□□□ 0.32
LRFN3-204ENST00000588831 KIF21BO75037 1637 aa17.02■□□□□ 0.32
LRFN3-204ENST00000588831 ANP32CO43423 234 aa17.01■□□□□ 0.31
LRFN3-204ENST00000588831 BICRAQ9NZM4 1560 aa17.01■□□□□ 0.31
LRFN3-204ENST00000588831 RAB3GAP2Q9H2M9 1393 aa17■□□□□ 0.31
LRFN3-204ENST00000588831 CCNB3Q8WWL7 1395 aa16.99■□□□□ 0.31
LRFN3-204ENST00000588831 UNC13AQ9UPW8 1703 aa16.99■□□□□ 0.31
LRFN3-204ENST00000588831 HNRNPUQ00839 825 aaKnown RBP eCLIP16.98■□□□□ 0.31
LRFN3-204ENST00000588831 CHIC2Q9UKJ5 165 aa16.97■□□□□ 0.31
LRFN3-204ENST00000588831 ARAP1Q96P48 1450 aa16.94■□□□□ 0.3
LRFN3-204ENST00000588831 CLSPNQ9HAW4 1339 aa16.92■□□□□ 0.3
LRFN3-204ENST00000588831 KIF27Q86VH2 1401 aa16.9■□□□□ 0.3
LRFN3-204ENST00000588831 FAM9BQ8IZU0 186 aa16.89■□□□□ 0.29
LRFN3-204ENST00000588831 IL27Q8NEV9 243 aa16.89■□□□□ 0.29
LRFN3-204ENST00000588831 MYT1LQ9UL68 1186 aa16.89■□□□□ 0.29
LRFN3-204ENST00000588831 PKNOX2Q96KN3 472 aa16.87■□□□□ 0.29
LRFN3-204ENST00000588831 TIMELESSQ9UNS1 1208 aa16.86■□□□□ 0.29
LRFN3-204ENST00000588831 NPM2Q86SE8 214 aaKnown RBP16.86■□□□□ 0.29
LRFN3-204ENST00000588831 RRP7BPQ9NSQ0 103 aa16.86■□□□□ 0.29
LRFN3-204ENST00000588831 CUX2O14529 1486 aa16.84■□□□□ 0.29
LRFN3-204ENST00000588831 ZNF326Q5BKZ1 582 aaKnown RBP16.83■□□□□ 0.29
LRFN3-204ENST00000588831 FOXD1Q16676 465 aa16.83■□□□□ 0.28
LRFN3-204ENST00000588831 TONSLQ96HA7 1378 aa16.83■□□□□ 0.28
LRFN3-204ENST00000588831 PLEKHG5O94827 1062 aa16.82■□□□□ 0.28
LRFN3-204ENST00000588831 GLIPR1L2Q4G1C9 344 aa16.8■□□□□ 0.28
LRFN3-204ENST00000588831 MSH5O43196 834 aa16.8■□□□□ 0.28
LRFN3-204ENST00000588831 PODXL2Q9NZ53 605 aa16.78■□□□□ 0.28
LRFN3-204ENST00000588831 PHLDB1Q86UU1 1377 aa16.78■□□□□ 0.28
LRFN3-204ENST00000588831 WDR97A6NE52 1622 aa16.77■□□□□ 0.27
LRFN3-204ENST00000588831 SETD5Q9C0A6 1442 aa16.76■□□□□ 0.27
LRFN3-204ENST00000588831 CARMIL1Q5VZK9 1371 aa16.75■□□□□ 0.27
LRFN3-204ENST00000588831 B4GALNT3Q6L9W6 998 aa16.75■□□□□ 0.27
LRFN3-204ENST00000588831 PPP1R15AO75807 674 aaPredicted RBP16.74■□□□□ 0.27
LRFN3-204ENST00000588831 FBLN2P98095 1184 aa16.74■□□□□ 0.27
LRFN3-204ENST00000588831 UBE2Q2Q8WVN8 375 aa16.73■□□□□ 0.27
LRFN3-204ENST00000588831 ARHGAP35Q9NRY4 1499 aa16.73■□□□□ 0.27
LRFN3-204ENST00000588831 VSIG10Q8N0Z9 540 aa16.72■□□□□ 0.27
LRFN3-204ENST00000588831 A0A0U1RQG5 324 aaPredicted RBP16.72■□□□□ 0.27
LRFN3-204ENST00000588831 CCDC184Q52MB2 194 aa16.71■□□□□ 0.27
LRFN3-204ENST00000588831 ANP32AP39687 249 aaKnown RBP16.71■□□□□ 0.26
LRFN3-204ENST00000588831 FHOD3Q2V2M9 1422 aa16.7■□□□□ 0.26
LRFN3-204ENST00000588831 CADPSQ9ULU8 1353 aa16.69■□□□□ 0.26
LRFN3-204ENST00000588831 LAS1LQ9Y4W2 734 aaKnown RBP16.68■□□□□ 0.26
LRFN3-204ENST00000588831 ZBTB47Q9UFB7 747 aaPredicted RBP16.68■□□□□ 0.26
LRFN3-204ENST00000588831 NCAPD3P42695 1498 aa16.68■□□□□ 0.26
LRFN3-204ENST00000588831 PRXQ9BXM0 1461 aa16.68■□□□□ 0.26
LRFN3-204ENST00000588831 NOP58Q9Y2X3 529 aaKnown RBP16.67■□□□□ 0.26
LRFN3-204ENST00000588831 RRBP1Q9P2E9 1410 aaKnown RBP16.67■□□□□ 0.26
LRFN3-204ENST00000588831 SLC24A1O60721 1099 aa16.66■□□□□ 0.26
LRFN3-204ENST00000588831 ARXQ96QS3 562 aa16.66■□□□□ 0.26
LRFN3-204ENST00000588831 MRS2Q9HD23 443 aa16.65■□□□□ 0.26
LRFN3-204ENST00000588831 TDRD9Q8NDG6 1382 aaKnown RBP16.65■□□□□ 0.26
LRFN3-204ENST00000588831 DAXXQ9UER7 740 aaPredicted RBP16.65■□□□□ 0.26
LRFN3-204ENST00000588831 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
LRFN3-204ENST00000588831 MTUS2Q5JR59 1369 aa16.64■□□□□ 0.25
LRFN3-204ENST00000588831 IGF1RP08069 1367 aa16.63■□□□□ 0.25
LRFN3-204ENST00000588831 CUX1P39880 1505 aa16.63■□□□□ 0.25
LRFN3-204ENST00000588831 HSPA5P11021 654 aaKnown RBP16.63■□□□□ 0.25
LRFN3-204ENST00000588831 ERICH6BQ5W0A0 696 aa16.63■□□□□ 0.25
LRFN3-204ENST00000588831 MAPKBP1O60336 1514 aa16.61■□□□□ 0.25
LRFN3-204ENST00000588831 NEFMP07197 916 aa16.61■□□□□ 0.25
LRFN3-204ENST00000588831 TOP2BQ02880 1626 aa16.6■□□□□ 0.25
LRFN3-204ENST00000588831 ARID4BQ4LE39 1312 aaPredicted RBP16.6■□□□□ 0.25
LRFN3-204ENST00000588831 PEG3Q9GZU2 1588 aa16.6■□□□□ 0.25
LRFN3-204ENST00000588831 RAD54L2Q9Y4B4 1467 aa16.57■□□□□ 0.24
LRFN3-204ENST00000588831 CFTRP13569 1480 aa16.56■□□□□ 0.24
LRFN3-204ENST00000588831 ZNF777Q9ULD5 760 aaPredicted RBP16.56■□□□□ 0.24
LRFN3-204ENST00000588831 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
LRFN3-204ENST00000588831 CCER2I3L3R5 266 aa16.54■□□□□ 0.24
LRFN3-204ENST00000588831 NESP48681 1621 aa16.53■□□□□ 0.24
LRFN3-204ENST00000588831 LRRC9Q6ZRR7 1453 aa16.53■□□□□ 0.24
LRFN3-204ENST00000588831 EIF4G2P78344 907 aaKnown RBP eCLIP16.52■□□□□ 0.23
LRFN3-204ENST00000588831 FANCD2Q9BXW9 1451 aa16.52■□□□□ 0.23
LRFN3-204ENST00000588831 WASHC2AQ641Q2 1341 aa16.5■□□□□ 0.23
LRFN3-204ENST00000588831 C11orf95C9JLR9 678 aaPredicted RBP16.5■□□□□ 0.23
LRFN3-204ENST00000588831 L3MBTL2Q969R5 705 aa16.49■□□□□ 0.23
LRFN3-204ENST00000588831 KDM2AQ9Y2K7 1162 aa16.48■□□□□ 0.23
LRFN3-204ENST00000588831 ERICH3Q5RHP9 1530 aa16.48■□□□□ 0.23
LRFN3-204ENST00000588831 PAK3O75914 559 aaPredicted RBP16.47■□□□□ 0.23
LRFN3-204ENST00000588831 BRPF3Q9ULD4 1205 aa16.44■□□□□ 0.22
LRFN3-204ENST00000588831 TIAM1Q13009 1591 aa16.44■□□□□ 0.22
LRFN3-204ENST00000588831 NAP1L5Q96NT1 182 aaPredicted RBP16.43■□□□□ 0.22
LRFN3-204ENST00000588831 HMGXB3Q12766 1538 aa16.43■□□□□ 0.22
LRFN3-204ENST00000588831 SLC4A1APQ9BWU0 796 aaKnown RBP16.42■□□□□ 0.22
LRFN3-204ENST00000588831 CCDC18Q5T9S5 1454 aa16.42■□□□□ 0.22
LRFN3-204ENST00000588831 FHAD1B1AJZ9 1412 aa16.42■□□□□ 0.22
LRFN3-204ENST00000588831 FANCIQ9NVI1 1328 aa16.42■□□□□ 0.22
LRFN3-204ENST00000588831 PPP4R2Q9NY27 417 aa16.41■□□□□ 0.22
LRFN3-204ENST00000588831 PTPRKQ15262 1439 aa16.4■□□□□ 0.22
LRFN3-204ENST00000588831 MPHOSPH9Q99550 1183 aa16.39■□□□□ 0.21
LRFN3-204ENST00000588831 CC2D2AQ9P2K1 1620 aa16.38■□□□□ 0.21
LRFN3-204ENST00000588831 AQRO60306 1485 aaKnown RBP eCLIP16.38■□□□□ 0.21
LRFN3-204ENST00000588831 ZNF644Q9H582 1327 aaPredicted RBP16.38■□□□□ 0.21
LRFN3-204ENST00000588831 PRKRIP1Q9H875 184 aaPredicted RBP16.37■□□□□ 0.21
LRFN3-204ENST00000588831 NBPF8Q3BBV2 869 aa16.36■□□□□ 0.21
LRFN3-204ENST00000588831 PCF11O94913 1555 aaKnown RBP16.36■□□□□ 0.21
LRFN3-204ENST00000588831 AMER1Q5JTC6 1135 aaPredicted RBP16.35■□□□□ 0.21
LRFN3-204ENST00000588831 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms