RNA–Protein interactions for RNA: ENST00000588706.1

TUBD1-209, Transcript of tubulin delta 1, humanhuman

TSL 5

Gene TUBD1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-209ENST00000588706 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
TUBD1-209ENST00000588706 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
TUBD1-209ENST00000588706 PEG3Q9GZU2 1588 aa16.59■□□□□ 0.25
TUBD1-209ENST00000588706 POTEHQ6S545 545 aa16.57■□□□□ 0.24
TUBD1-209ENST00000588706 HRCP23327 699 aa16.52■□□□□ 0.24
TUBD1-209ENST00000588706 ZBTB47Q9UFB7 747 aaPredicted RBP16.52■□□□□ 0.24
TUBD1-209ENST00000588706 FARP1Q9Y4F1 1045 aaPredicted RBP16.5■□□□□ 0.23
TUBD1-209ENST00000588706 SMARCA2P51531 1590 aa16.49■□□□□ 0.23
TUBD1-209ENST00000588706 BICRAQ9NZM4 1560 aa16.48■□□□□ 0.23
TUBD1-209ENST00000588706 KLHL34Q8N239 644 aa16.47■□□□□ 0.23
TUBD1-209ENST00000588706 NPM1P06748 294 aaKnown RBP eCLIP16.45■□□□□ 0.22
TUBD1-209ENST00000588706 EEA1Q15075 1411 aa16.45■□□□□ 0.22
TUBD1-209ENST00000588706 TRIM26Q12899 539 aaPredicted RBP16.44■□□□□ 0.22
TUBD1-209ENST00000588706 MNX1P50219 401 aaPredicted RBP16.43■□□□□ 0.22
TUBD1-209ENST00000588706 IFNLR1Q8IU57 520 aaPredicted RBP16.41■□□□□ 0.22
TUBD1-209ENST00000588706 CCDC88BA6NC98 1476 aa16.4■□□□□ 0.22
TUBD1-209ENST00000588706 LOC105371045A0A1W2PR82 267 aa16.39■□□□□ 0.21
TUBD1-209ENST00000588706 PCGF6Q9BYE7 350 aa16.36■□□□□ 0.21
TUBD1-209ENST00000588706 ZEB1P37275 1124 aaPredicted RBP16.3■□□□□ 0.2
TUBD1-209ENST00000588706 HAX1O00165 279 aa16.29■□□□□ 0.2
TUBD1-209ENST00000588706 SPOCK2Q92563 424 aa16.28■□□□□ 0.2
TUBD1-209ENST00000588706 ATAD2BQ9ULI0 1458 aa16.23■□□□□ 0.19
TUBD1-209ENST00000588706 CD44P16070 742 aaKnown RBP16.23■□□□□ 0.19
TUBD1-209ENST00000588706 C19orf67A6NJJ6 358 aa16.22■□□□□ 0.19
TUBD1-209ENST00000588706 PAK3O75914 559 aaPredicted RBP16.22■□□□□ 0.19
TUBD1-209ENST00000588706 NUBP1P53384 320 aa16.21■□□□□ 0.19
TUBD1-209ENST00000588706 BAZ1BQ9UIG0 1483 aaKnown RBP16.21■□□□□ 0.19
TUBD1-209ENST00000588706 RASEFQ8IZ41 740 aa16.18■□□□□ 0.18
TUBD1-209ENST00000588706 HMGXB3Q12766 1538 aa16.18■□□□□ 0.18
TUBD1-209ENST00000588706 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
TUBD1-209ENST00000588706 FAM212AQ96EL1 285 aa16.17■□□□□ 0.18
TUBD1-209ENST00000588706 TSPYL2Q9H2G4 693 aaPredicted RBP16.16■□□□□ 0.18
TUBD1-209ENST00000588706 ABCC8Q09428 1581 aa16.15■□□□□ 0.18
TUBD1-209ENST00000588706 TNIKQ9UKE5 1360 aa16.13■□□□□ 0.17
TUBD1-209ENST00000588706 ZRANB1Q9UGI0 708 aa16.12■□□□□ 0.17
TUBD1-209ENST00000588706 DCAF8Q5TAQ9 597 aa16.11■□□□□ 0.17
TUBD1-209ENST00000588706 KIF21BO75037 1637 aa16.1■□□□□ 0.17
TUBD1-209ENST00000588706 FAM9AQ8IZU1 332 aaPredicted RBP16.1■□□□□ 0.17
TUBD1-209ENST00000588706 GOLGA3Q08378 1498 aa16.09■□□□□ 0.17
TUBD1-209ENST00000588706 GSE1Q14687 1217 aa16.08■□□□□ 0.16
TUBD1-209ENST00000588706 CIZ1Q9ULV3 898 aaPredicted RBP16.07■□□□□ 0.16
TUBD1-209ENST00000588706 NCAPD3P42695 1498 aa16.07■□□□□ 0.16
TUBD1-209ENST00000588706 CEP164Q9UPV0 1460 aa16.05■□□□□ 0.16
TUBD1-209ENST00000588706 EVX2Q03828 476 aa16.04■□□□□ 0.16
TUBD1-209ENST00000588706 BIVM-ERCC5R4GMW8 1640 aa16.01■□□□□ 0.15
TUBD1-209ENST00000588706 TOP2BQ02880 1626 aa16.01■□□□□ 0.15
TUBD1-209ENST00000588706 CEP162Q5TB80 1403 aa16■□□□□ 0.15
TUBD1-209ENST00000588706 ZNF579Q8NAF0 562 aaKnown RBP15.99■□□□□ 0.15
TUBD1-209ENST00000588706 CCDC61Q9Y6R9 512 aa15.99■□□□□ 0.15
TUBD1-209ENST00000588706 PRDM2Q13029 1718 aa15.99■□□□□ 0.15
TUBD1-209ENST00000588706 SYNJ1O43426 1573 aa15.98■□□□□ 0.15
TUBD1-209ENST00000588706 SOGA1O94964 1423 aa15.95■□□□□ 0.14
TUBD1-209ENST00000588706 PHF12Q96QT6 1004 aa15.94■□□□□ 0.14
TUBD1-209ENST00000588706 ERICH3Q5RHP9 1530 aa15.91■□□□□ 0.14
TUBD1-209ENST00000588706 SP7Q8TDD2 431 aaPredicted RBP15.91■□□□□ 0.14
TUBD1-209ENST00000588706 PYGBP11216 843 aa15.9■□□□□ 0.14
TUBD1-209ENST00000588706 CLCN6P51797 869 aa15.86■□□□□ 0.13
TUBD1-209ENST00000588706 AMER1Q5JTC6 1135 aaPredicted RBP15.85■□□□□ 0.13
TUBD1-209ENST00000588706 CFTRP13569 1480 aa15.84■□□□□ 0.13
TUBD1-209ENST00000588706 KIF12Q96FN5 646 aa15.84■□□□□ 0.13
TUBD1-209ENST00000588706 ECM2O94769 699 aaPredicted RBP15.82■□□□□ 0.12
TUBD1-209ENST00000588706 PKD2Q13563 968 aa15.82■□□□□ 0.12
TUBD1-209ENST00000588706 UBTFP17480 764 aaKnown RBP15.81■□□□□ 0.12
TUBD1-209ENST00000588706 RUSC2Q8N2Y8 1516 aa15.8■□□□□ 0.12
TUBD1-209ENST00000588706 MAP3K13O43283 966 aa15.8■□□□□ 0.12
TUBD1-209ENST00000588706 CHRM1P11229 460 aaPredicted RBP15.8■□□□□ 0.12
TUBD1-209ENST00000588706 PCDHB13Q9Y5F0 798 aa15.79■□□□□ 0.12
TUBD1-209ENST00000588706 GABBR2O75899 941 aa15.78■□□□□ 0.12
TUBD1-209ENST00000588706 VPS8Q8N3P4 1428 aa15.77■□□□□ 0.12
TUBD1-209ENST00000588706 CLIP1P30622 1438 aa15.77■□□□□ 0.11
TUBD1-209ENST00000588706 SGIP1Q9BQI5 828 aa15.76■□□□□ 0.11
TUBD1-209ENST00000588706 MS4A3Q96HJ5 214 aa15.75■□□□□ 0.11
TUBD1-209ENST00000588706 KIF27Q86VH2 1401 aa15.75■□□□□ 0.11
TUBD1-209ENST00000588706 PRXQ9BXM0 1461 aa15.74■□□□□ 0.11
TUBD1-209ENST00000588706 GALR2O43603 387 aaPredicted RBP15.73■□□□□ 0.11
TUBD1-209ENST00000588706 RTN4Q9NQC3 1192 aaKnown RBP15.73■□□□□ 0.11
TUBD1-209ENST00000588706 ZNF467Q7Z7K2 595 aaPredicted RBP15.71■□□□□ 0.11
TUBD1-209ENST00000588706 CUX1P39880 1505 aa15.69■□□□□ 0.1
TUBD1-209ENST00000588706 PPARGC1BQ86YN6 1023 aaKnown RBP15.69■□□□□ 0.1
TUBD1-209ENST00000588706 IFNL1Q8IU54 200 aa15.69■□□□□ 0.1
TUBD1-209ENST00000588706 RAPGEF2Q9Y4G8 1499 aa15.67■□□□□ 0.1
TUBD1-209ENST00000588706 PCDHB8Q9UN66 801 aa15.66■□□□□ 0.1
TUBD1-209ENST00000588706 CADPSQ9ULU8 1353 aa15.65■□□□□ 0.1
TUBD1-209ENST00000588706 RIOK3O14730 519 aaKnown RBP15.62■□□□□ 0.09
TUBD1-209ENST00000588706 RGL2O15211 777 aa15.61■□□□□ 0.09
TUBD1-209ENST00000588706 RNF25Q96BH1 459 aaPredicted RBP15.61■□□□□ 0.09
TUBD1-209ENST00000588706 CCER1Q8TC90 406 aaPredicted RBP15.6■□□□□ 0.09
TUBD1-209ENST00000588706 DCBLD2Q96PD2 775 aa15.6■□□□□ 0.09
TUBD1-209ENST00000588706 TAOK2Q9UL54 1235 aa15.58■□□□□ 0.08
TUBD1-209ENST00000588706 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
TUBD1-209ENST00000588706 TRPC6Q9Y210 931 aa15.57■□□□□ 0.08
TUBD1-209ENST00000588706 MAP3K1Q13233 1512 aa15.55■□□□□ 0.08
TUBD1-209ENST00000588706 TIE1P35590 1138 aa15.55■□□□□ 0.08
TUBD1-209ENST00000588706 PDAP1Q13442 181 aaKnown RBP15.55■□□□□ 0.08
TUBD1-209ENST00000588706 VGFO15240 615 aaPredicted RBP15.54■□□□□ 0.08
TUBD1-209ENST00000588706 CLSPNQ9HAW4 1339 aa15.53■□□□□ 0.08
TUBD1-209ENST00000588706 PSEN1P49768 467 aa15.52■□□□□ 0.08
TUBD1-209ENST00000588706 DNMBPQ6XZF7 1577 aa15.52■□□□□ 0.07
TUBD1-209ENST00000588706 LAMC3Q9Y6N6 1575 aa15.5■□□□□ 0.07
TUBD1-209ENST00000588706 TMEM106CQ9BVX2 250 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms