RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 PRG4Q92954 1404 aaPredicted RBP24.75■■□□□ 1.55
DDX39A-208ENST00000588692 KIAA0586Q9BVV6 1533 aa24.75■■□□□ 1.55
DDX39A-208ENST00000588692 JPH4Q96JJ6 628 aa24.74■■□□□ 1.55
DDX39A-208ENST00000588692 TRHP20396 242 aaPredicted RBP24.64■■□□□ 1.54
DDX39A-208ENST00000588692 RAPGEF2Q9Y4G8 1499 aa24.61■■□□□ 1.53
DDX39A-208ENST00000588692 IQGAP2Q13576 1575 aa24.58■■□□□ 1.53
DDX39A-208ENST00000588692 CARMIL2Q6F5E8 1435 aa24.49■■□□□ 1.51
DDX39A-208ENST00000588692 CTTNBP2Q8WZ74 1663 aa24.46■■□□□ 1.51
DDX39A-208ENST00000588692 ADCY10Q96PN6 1610 aa24.45■■□□□ 1.5
DDX39A-208ENST00000588692 PRXQ9BXM0 1461 aa24.45■■□□□ 1.5
DDX39A-208ENST00000588692 UGGT2Q9NYU1 1516 aa24.43■■□□□ 1.5
DDX39A-208ENST00000588692 TNIKQ9UKE5 1360 aa24.41■■□□□ 1.5
DDX39A-208ENST00000588692 PTPRGP23470 1445 aa24.41■■□□□ 1.5
DDX39A-208ENST00000588692 DISP1Q96F81 1524 aa24.4■■□□□ 1.5
DDX39A-208ENST00000588692 MAPKBP1O60336 1514 aa24.39■■□□□ 1.5
DDX39A-208ENST00000588692 NPM1P06748 294 aaKnown RBP eCLIP24.38■■□□□ 1.49
DDX39A-208ENST00000588692 EEA1Q15075 1411 aa24.36■■□□□ 1.49
DDX39A-208ENST00000588692 KIAA0556O60303 1618 aa24.36■■□□□ 1.49
DDX39A-208ENST00000588692 KIF13AQ9H1H9 1805 aa24.35■■□□□ 1.49
DDX39A-208ENST00000588692 CSRNP3Q8WYN3 585 aa24.3■■□□□ 1.48
DDX39A-208ENST00000588692 UHRF1BP1LA0JNW5 1464 aa24.28■■□□□ 1.48
DDX39A-208ENST00000588692 GOLGA3Q08378 1498 aa24.28■■□□□ 1.48
DDX39A-208ENST00000588692 ABCC10Q5T3U5 1492 aa24.28■■□□□ 1.48
DDX39A-208ENST00000588692 ABCC2Q92887 1545 aa24.28■■□□□ 1.48
DDX39A-208ENST00000588692 TTBK1Q5TCY1 1321 aaPredicted RBP24.26■■□□□ 1.47
DDX39A-208ENST00000588692 UACAQ9BZF9 1416 aa24.25■■□□□ 1.47
DDX39A-208ENST00000588692 DIP2BQ9P265 1576 aa24.25■■□□□ 1.47
DDX39A-208ENST00000588692 FAM69CQ0P6D2 419 aa24.18■■□□□ 1.46
DDX39A-208ENST00000588692 KDM5BQ9UGL1 1544 aa24.16■■□□□ 1.46
DDX39A-208ENST00000588692 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.46
DDX39A-208ENST00000588692 PLB1Q6P1J6 1458 aa24.14■■□□□ 1.46
DDX39A-208ENST00000588692 KIF21BO75037 1637 aa24.14■■□□□ 1.45
DDX39A-208ENST00000588692 ASXL2Q76L83 1435 aa24.12■■□□□ 1.45
DDX39A-208ENST00000588692 ZCCHC11Q5TAX3 1644 aaKnown RBP24.12■■□□□ 1.45
DDX39A-208ENST00000588692 SAMD9Q5K651 1589 aa24.1■■□□□ 1.45
DDX39A-208ENST00000588692 ABCA8O94911 1581 aa24.09■■□□□ 1.45
DDX39A-208ENST00000588692 FAM9AQ8IZU1 332 aaPredicted RBP24.08■■□□□ 1.45
DDX39A-208ENST00000588692 GLI2P10070 1586 aa24.06■■□□□ 1.44
DDX39A-208ENST00000588692 TSPOAP1O95153 1857 aa24.02■■□□□ 1.44
DDX39A-208ENST00000588692 EPRSP07814 1512 aaKnown RBP23.99■■□□□ 1.43
DDX39A-208ENST00000588692 WDR7Q9Y4E6 1490 aa23.98■■□□□ 1.43
DDX39A-208ENST00000588692 P3H3Q8IVL6 736 aa23.95■■□□□ 1.42
DDX39A-208ENST00000588692 EFCAB5A4FU69 1503 aa23.95■■□□□ 1.42
DDX39A-208ENST00000588692 KDM6BO15054 1643 aa23.95■■□□□ 1.42
DDX39A-208ENST00000588692 MAP3K4Q9Y6R4 1608 aa23.95■■□□□ 1.42
DDX39A-208ENST00000588692 PPRC1Q5VV67 1664 aaKnown RBP23.94■■□□□ 1.42
DDX39A-208ENST00000588692 RAPGEF6Q8TEU7 1601 aa23.92■■□□□ 1.42
DDX39A-208ENST00000588692 FHOD3Q2V2M9 1422 aa23.87■■□□□ 1.41
DDX39A-208ENST00000588692 TEX14Q8IWB6 1497 aa23.86■■□□□ 1.41
DDX39A-208ENST00000588692 CFAP43Q8NDM7 1665 aa23.85■■□□□ 1.41
DDX39A-208ENST00000588692 ATP10BO94823 1461 aa23.85■■□□□ 1.41
DDX39A-208ENST00000588692 RANGAP1P46060 587 aaPredicted RBP23.85■■□□□ 1.41
DDX39A-208ENST00000588692 UBTFP17480 764 aaKnown RBP23.83■■□□□ 1.41
DDX39A-208ENST00000588692 NUP153P49790 1475 aaKnown RBP23.81■■□□□ 1.4
DDX39A-208ENST00000588692 MAGI3Q5TCQ9 1506 aa23.77■■□□□ 1.4
DDX39A-208ENST00000588692 ARID3CA6NKF2 412 aa23.76■■□□□ 1.39
DDX39A-208ENST00000588692 KCNH8Q96L42 1107 aa23.76■■□□□ 1.39
DDX39A-208ENST00000588692 CD109Q6YHK3 1445 aa23.76■■□□□ 1.39
DDX39A-208ENST00000588692 EHMT2Q96KQ7 1210 aa23.75■■□□□ 1.39
DDX39A-208ENST00000588692 ABCA9Q8IUA7 1624 aa23.72■■□□□ 1.39
DDX39A-208ENST00000588692 ARHGAP35Q9NRY4 1499 aa23.72■■□□□ 1.39
DDX39A-208ENST00000588692 FMN1Q68DA7 1419 aa23.71■■□□□ 1.39
DDX39A-208ENST00000588692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.69■■□□□ 1.38
DDX39A-208ENST00000588692 HNRNPUL2Q1KMD3 747 aaKnown RBP23.69■■□□□ 1.38
DDX39A-208ENST00000588692 COL17A1Q9UMD9 1497 aaPredicted RBP23.67■■□□□ 1.38
DDX39A-208ENST00000588692 AEBP2Q6ZN18 517 aaPredicted RBP23.65■■□□□ 1.38
DDX39A-208ENST00000588692 HECW1Q76N89 1606 aa23.65■■□□□ 1.38
DDX39A-208ENST00000588692 PLEKHD1A6NEE1 506 aa23.61■■□□□ 1.37
DDX39A-208ENST00000588692 CDK13Q14004 1512 aaKnown RBP23.58■■□□□ 1.37
DDX39A-208ENST00000588692 ARAP3Q8WWN8 1544 aa23.57■■□□□ 1.36
DDX39A-208ENST00000588692 PHLDB1Q86UU1 1377 aa23.57■■□□□ 1.36
DDX39A-208ENST00000588692 NEO1Q92859 1461 aa23.55■■□□□ 1.36
DDX39A-208ENST00000588692 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.52■■□□□ 1.367e-7■■□□□ 14.3
DDX39A-208ENST00000588692 TTC37Q6PGP7 1564 aa23.5■■□□□ 1.35
DDX39A-208ENST00000588692 CFAP74Q9C0B2 1584 aa23.49■■□□□ 1.35
DDX39A-208ENST00000588692 ATP1B4Q9UN42 357 aaPredicted RBP23.49■■□□□ 1.35
DDX39A-208ENST00000588692 CLIP1P30622 1438 aa23.48■■□□□ 1.35
DDX39A-208ENST00000588692 LRRIQ1Q96JM4 1722 aa23.48■■□□□ 1.35
DDX39A-208ENST00000588692 PCF11O94913 1555 aaKnown RBP23.48■■□□□ 1.35
DDX39A-208ENST00000588692 CDK11AQ9UQ88 783 aaPredicted RBP23.47■■□□□ 1.35
DDX39A-208ENST00000588692 CASKIN1Q8WXD9 1431 aa23.47■■□□□ 1.35
DDX39A-208ENST00000588692 CCDC18Q5T9S5 1454 aa23.45■■□□□ 1.34
DDX39A-208ENST00000588692 KDM4FA0A1W2PPD8 638 aa23.43■■□□□ 1.34
DDX39A-208ENST00000588692 KIF14Q15058 1648 aa23.43■■□□□ 1.34
DDX39A-208ENST00000588692 FANCAO15360 1455 aa23.42■■□□□ 1.34
DDX39A-208ENST00000588692 FYCO1Q9BQS8 1478 aa23.42■■□□□ 1.34
DDX39A-208ENST00000588692 TROQ12816 1431 aaPredicted RBP23.41■■□□□ 1.34
DDX39A-208ENST00000588692 ADGRL1O94910 1474 aa23.41■■□□□ 1.34
DDX39A-208ENST00000588692 MYO5CQ9NQX4 1742 aa23.4■■□□□ 1.34
DDX39A-208ENST00000588692 FRMPD1Q5SYB0 1578 aa23.39■■□□□ 1.34
DDX39A-208ENST00000588692 AKNAQ7Z591 1439 aa23.38■■□□□ 1.33
DDX39A-208ENST00000588692 PLCH2O75038 1416 aa23.37■■□□□ 1.33
DDX39A-208ENST00000588692 RICTORQ6R327 1708 aa23.36■■□□□ 1.33
DDX39A-208ENST00000588692 DENND4BO75064 1496 aaPredicted RBP23.36■■□□□ 1.33
DDX39A-208ENST00000588692 RAPGEF3O95398 923 aa23.35■■□□□ 1.33
DDX39A-208ENST00000588692 CEP162Q5TB80 1403 aa23.3■■□□□ 1.32
DDX39A-208ENST00000588692 ZMYM4Q5VZL5 1548 aa23.29■■□□□ 1.32
DDX39A-208ENST00000588692 ARHGEF40Q8TER5 1519 aa23.28■■□□□ 1.32
DDX39A-208ENST00000588692 EFCAB2Q5VUJ9 269 aa23.26■■□□□ 1.31
DDX39A-208ENST00000588692 ARHGAP5Q13017 1502 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 1203 ms